Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq25470 113 4e-20 >seq25470 Length=54808 Score = 113 bits (124), Expect = 4e-20 Identities = 184/265 (69%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 99507 CCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCCCGCTCCGCACGGTGAGCGAGGTGTTGAG 99566 ||| || || ||||||||| | | | | ||| ||||||||| |||| || ||||| Sbjct 42503 CCACCCTAGCTTGGCGTGCGCGTTGGCCTCACCGTCCCGCACGGTCAGCGTGGCATTGAG 42444 Query 99567 CAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTGCTGCGGCCGCGGGGTCCC 99626 ||||| ||||| || | ||||| | ||||||||||| | || ||| || Sbjct 42443 GAGCAGGACGCCACGTTGAGCCCACTCGGTGAGGCAGCCGTGGTTGGGACGCTTCCAGCC 42384 Query 99627 GGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCTGGGCGGGATCGGAACGCC 99686 ||| | | || || | |||||||||| ||| ||| |||||| | | || || Sbjct 42383 GGGTAGGCTCCGCTCGAGCTCCGCGTAGATCTTCAAGAGCGAGGGCGGCACCTTGACACC 42324 Query 99687 GCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCTGTGGTAGGGGTCCTGGCC 99746 | |||||| ||| | ||||| |||||||| || | ||| ||||||||||||| || Sbjct 42323 CCTGTTCACCGAGAACGAGAGGCCATGGGCCTGGCCCTCTCTGAGGTAGGGGTCCTGCCC 42264 Query 99747 CAGGATGACGACCTTGACGTCCTCG 99771 ||| || || |||||||| | |||| Sbjct 42263 CAGAATCACCACCTTGACCTGCTCG 42239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440754871646880