Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq16052 91.5 1e-13 >seq16052 Length=5781 Score = 91.5 bits (100), Expect = 1e-13 Identities = 114/150 (76%), Gaps = 6/150 (4%) Strand=Plus/Minus Query 71418 GGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTT 71477 |||||| | || || |||||||| ||||||||||||| |||||| || || || Sbjct 4857 GGTCATACGCGAAGGGAAGGCGTGCGGGTTGATGATGACATCGGGCGACATGCCCGACTC 4798 Query 71478 GTCGAAGGGCATGTCCTCCTGGGTCAGGACAGCTCCG-CATGTC-CCCTTTTGCGCCGTG 71535 | ||||||||||| |||||| | | |||||| || |||| | |||||||| |||||| Sbjct 4797 GCTGAAGGGCATGTTCTCCTGCGGC--CACAGCTGCGACATGACACCCTTTTG-GCCGTG 4741 Query 71536 AAT-GACGCAAACTTGTCGCCCATCTCTGG 71564 | ||||| |||||||| || ||| |||| Sbjct 4740 CCTCGACGCGAACTTGTCACCGATCACTGG 4711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338656677709152