Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq15340 129 5e-25 seq24868 118 9e-22 seq22622 114 1e-20 seq23693 109 4e-19 seq21073 109 4e-19 seq17601 109 4e-19 seq25697 105 5e-18 seq21089 100 2e-16 seq19457 100 2e-16 seq25702 96.9 3e-15 seq25321 96.9 3e-15 seq18580 89.7 4e-13 seq18353 84.2 2e-11 seq21899 82.4 6e-11 seq11928 82.4 6e-11 >seq15340 Length=11482 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 700 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 759 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | ||||| ||||| |||||| ||| | |||||| ||||| || | | Sbjct 760 TTACCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTC 819 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || ||| || | ||||||||| || || || Sbjct 820 TGCTTCACGTTCTCAATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCAGTG 879 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || ||||| || ||||||||| Sbjct 880 AGGGTCTTGACGAAGATCTGCATT 903 Score = 118 bits (130), Expect = 9e-22 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 244 TGGAGSGTSGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 303 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 304 TTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 363 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | |||||| | ||| ||| | |||||||| || || ||| Sbjct 364 TGCTTCACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGCGTGATGGTCTTGCCAGTC 423 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| |||||||| Sbjct 424 AGGGTCTTGACAAAGATCTGCAT 446 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || ||||||||||| || | || | ||||||| | || Sbjct 472 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTACGGCCGTCCTCGAGCTGC 531 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | ||||| ||||| |||||| ||| | ||| || ||||| || | | Sbjct 532 TTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTC 591 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||| | ||| || | |||||||| ||||| ||| Sbjct 592 TGCTTCACGTTCTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCAGTC 651 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| |||||||| Sbjct 652 AGGGTCTTGACAAAGATCTGCAT 674 >seq24868 Length=8702 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||||||||| || |||||||||||||||| ||| | | ||||| | || Sbjct 7474 TGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCATCCTCGAGCTGC 7415 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| ||| | ||| || ||||| || | | Sbjct 7414 TTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTC 7355 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| | ||| || | ||||||||| || |||||| Sbjct 7354 TGCTTCACGTTCTCGATCGTGTCGCTAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 7295 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 7294 AGAGTCTTGACGAAGATCTGCAT 7272 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||||||||| || ||||||||||| || | ||| | ||||||| | || Sbjct 7246 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGC 7187 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| |||||| || | |||||| ||||| || | Sbjct 7186 TTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTT 7127 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| | ||| || | |||||||| || || || Sbjct 7126 TGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGAGTGATGGTCTTACCCGTG 7067 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 7066 AGGGTCTTGACGAAGATCTGCAT 7044 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 7018 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 6959 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| || || ||| | |||||| ||||| ||| | Sbjct 6958 TTACCAGCGAAGATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTT 6899 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||||| || | | | |||||| | ||| || | ||||||||| || || || Sbjct 6898 TGCTTGACATTCTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCAGTG 6839 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || || || || ||||||||| Sbjct 6838 AGGGTCTTCACGAAGATCTGCATT 6815 >seq22622 Length=4454 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 1500 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 1441 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 1440 TTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 1381 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | || |||| | ||| || | |||||||| || |||||| Sbjct 1380 TGCTTCACGTTCTCAATGGTATCGCTCGACTCAACCTCGAGCGTGATGGTCTTACCGGTC 1321 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 1320 AGAGTCTTGACGAAGATCTGCAT 1298 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || |||||||||||||| | || | ||||||| | || Sbjct 816 TGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 757 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||| || || ||| | |||||| ||||| || | | Sbjct 756 TTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 697 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| | ||| || | ||||||||| || ||||| Sbjct 696 TGCTTCACGTTCTCGATCGTGTCGCTAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 637 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || || || || ||||||||| Sbjct 636 AGGGTCTTCACGAAGATCTGCATT 613 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 1044 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 985 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| ||| | ||| || ||||| || | | Sbjct 984 TTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTC 925 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || ||| || | || ||||| || || || Sbjct 924 TGCTTCACGTTTTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATGGTCTTACCCGTA 865 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 864 AGGGTCTTGACGAAGATCTGCAT 842 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | ||| | ||||||| | || Sbjct 1272 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGC 1213 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| |||||| || | |||||| ||||| || | | Sbjct 1212 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 1153 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGGTTTTTCCGG 16910 |||||||| | | | |||| ||| |||| || || | || ||||| || || | Sbjct 1152 TGCTTCACGTTCTCGATCGTGT--CCGAGCTCTCGACCTCGAGAGTAATGGTCTTACCCG 1095 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | ||||| ||||| || |||||||| Sbjct 1094 TGAGCGTCTTGACGAAGATCTGCAT 1070 >seq23693 Length=4026 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || |||||||||||||| | || ||||||| | || Sbjct 3138 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGC 3197 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| || || ||| | |||||| ||||| || | | Sbjct 3198 TTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 3257 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || ||| || | ||||||||| || |||||| Sbjct 3258 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 3317 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 3318 AGGGTCTTGACGAAGATCTGCAT 3340 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 2910 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 2969 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| ||| | ||||| ||||| ||| | Sbjct 2970 TTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTTT 3029 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGGTTTTTCCGG 16910 |||||||| | | | |||| ||| |||| || || | |||||| || || |||| Sbjct 3030 TGCTTCACGTTCTCAATCGTGT--CCGAGCTCTCGACCTCGAGGGTGATAGTCTTGCCGG 3087 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || || |||||||| Sbjct 3088 TGAGAGTCTTCACGAAGATCTGCAT 3112 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || ||||||||||| || ||||||||||| || Sbjct 3342 CCTCCACGAAGGCGAAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 3401 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || || || || | || || ||||| || || ||| Sbjct 3402 AGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGG 3461 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| || ||||| || | |||||||| | | | || |||| | ||| Sbjct 3462 ATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACC 3521 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||| ||||| || |||||||| || ||||| || |||||||| Sbjct 3522 TCGAGGGTAATGGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 3568 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | ||| | ||||||| | || Sbjct 3594 TGGAGAGTCGACTCCTTATGGATGTTGTAGTCCGCGAGGGTACGGCCGTCCTCGAGCTGC 3653 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| |||||| || | |||||| ||||| || | | Sbjct 3654 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 3713 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | |||||| | ||| || | |||||||| || || || Sbjct 3714 TGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGCGTGATGGTCTTGCCAGTG 3773 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || || || || ||||||||| Sbjct 3774 AGGGTCTTCACGAAGATCTGCATT 3797 >seq21073 Length=984 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| || | ||||||| | || Sbjct 782 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 841 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| |||||| || | |||||| ||||| || | | Sbjct 842 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 901 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | || |||| | ||| || | ||||||||| || |||||| Sbjct 902 TGCTTCACGTTCTCAATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 961 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 962 AGAGTCTTGACGAAGATCTGCAT 984 >seq17601 Length=6497 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 5409 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 5350 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| |||||| || | ||| || ||||| || | | Sbjct 5349 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTC 5290 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| | ||| || | ||||||||| || || || Sbjct 5289 TGCTTCACGTTCTCGATGGTGTCGCTAGACTCGACCTCGAGGGTGATGGTCTTGCCAGTG 5230 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 5229 AGGGTCTTCACGAAGATCTGCAT 5207 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || ||||||||||| || Sbjct 5661 CCTCCACGCAGGCGAAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCG 5602 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || || || || | || || ||||| |||||| || Sbjct 5601 AGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 5542 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG- 16886 | ||||| ||||| || | ||||||||| | | | |||| ||| |||| || Sbjct 5541 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGT--CCGAGCTCTCGA 5484 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || ||||| || || || ||||| ||||| || |||||||| Sbjct 5483 CCTCAAGAGTAATGGTCTTACCCGTGAGCGTCTTGACGAAGATCTGCAT 5435 >seq25697 Length=27391 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | ||| | ||||||| | || Sbjct 15197 TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCAAGCTGC 15138 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| |||||| || | |||||| ||||| || | | Sbjct 15137 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTC 15078 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | |||||| | ||| || | ||||||||| || ||||| Sbjct 15077 TGCTTCACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 15018 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||||| || |||||||| Sbjct 15017 AGCGTCTTGACGAAGATCTGCAT 14995 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 14969 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 14910 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| |||||| || | ||||| ||||| || | Sbjct 14909 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTT 14850 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||||| || | | | ||||||| | ||| || | |||||||| || || || Sbjct 14849 TGCTTGACGTTCTCAATGGTGTCGCTCGACTCGACCTCGAGAGTGATGGTCTTACCCGTG 14790 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || |||||||| Sbjct 14789 AGCGTCTTCACGAAGATCTGCAT 14767 >seq21089 Length=4191 Score = 100 bits (110), Expect = 2e-16 Identities = 116/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| ||||||||| || |||||||||||||| | ||| | ||||||| | || Sbjct 3385 TGCAGGCAGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTAAGGCCGTCCTCGAGCTGC 3444 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG-GCAATTTG 16851 ||||| || |||| || ||||| | ||| ||||||||||| |||||| ||| ||| Sbjct 3445 TTGCCGGCGCAAATGAGGCGCTGGAGCTCCTTGGGCACGCCCTCCTTGTCGTGCACTTT- 3503 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 ||||||||| |||| ||||||||| |||| Sbjct 3504 CTGCTTCACGGTCTCCACCGTGTCGCCGCTCTCC 3537 >seq19457 Length=4199 Score = 100 bits (110), Expect = 2e-16 Identities = 116/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| ||||||||| || |||||||||||||| | ||| | ||||||| | || Sbjct 807 TGCAGGCAGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTAAGGCCGTCCTCGAGCTGC 748 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG-GCAATTTG 16851 ||||| || |||| || ||||| | ||| ||||||||||| |||||| ||| ||| Sbjct 747 TTGCCGGCGCAAATGAGGCGCTGGAGCTCCTTGGGCACGCCCTCCTTGTCGTGCACTTT- 689 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 ||||||||| |||| ||||||||| |||| Sbjct 688 CTGCTTCACGGTCTCCACCGTGTCGCCGCTCTCC 655 >seq25702 Length=8093 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||||||||| || ||||||||||| || | ||| ||||||| | || Sbjct 2143 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCGTCCTCGAGCTGC 2202 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| |||||| || | ||||| ||||| || | Sbjct 2203 TTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTT 2262 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| | ||| || | |||||||| || || || Sbjct 2263 TGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGAGTGATGGTCTTACCCGTG 2322 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||||| || |||||||| Sbjct 2323 AGCGTCTTGACGAAGATCTGCAT 2345 Score = 93.3 bits (102), Expect = 3e-14 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | ||| ||||||| | || Sbjct 2694 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGACCGTCCTCGAGCTGC 2753 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| |||||| || | |||||| ||||| || | Sbjct 2754 TTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTY 2813 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| | ||| || | |||||||| || || ||| Sbjct 2814 TGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGAGTGATGGTCTTGCCAGTC 2873 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 2874 AGGGTCTTCACGAAGATCTGCAT 2896 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || ||||||||||| || Sbjct 2898 CCTCCACGAAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCG 2957 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||| | || ||||| || | || || ||||| |||||| || Sbjct 2958 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 3017 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | |||||||| | | | ||||||| | ||| Sbjct 3018 ATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACC 3077 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || | ||| ||||| || || || || || || || || ||||||||| || Sbjct 3078 TCGAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATTGTG 3128 >seq25321 Length=10237 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 10110 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 10051 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| |||||| || | ||||| ||||| || | Sbjct 10050 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTT 9991 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | || |||| | ||| || | |||||||| || |||||| Sbjct 9990 TGCTTCACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGAGTGATGGTCTTGCCGGTC 9931 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 9930 AGGGTCTTGACGAAGATCTGCAT 9908 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| || | ||||||| | || Sbjct 9882 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 9823 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| || || ||| | ||||| ||||| || | | Sbjct 9822 TTGCCAGCGAAGATCAGACGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTC 9763 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | |||||| | ||| || | ||||||||| || || || Sbjct 9762 TGCTTCACATTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTG 9703 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 9702 AGGGTCTTCACGAAGATCTGCAT 9680 >seq18580 Length=2690 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || |||||||||||||| Sbjct 2648 CCTCCACGAAGGCGAAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 2589 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||| | || ||||| || | || || ||||| |||||| || Sbjct 2588 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 2529 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | ||||||||| | | | |||||| | ||| Sbjct 2528 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATGGTGTCGGACGACTCGACC 2469 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || || || || || || || |||||||| Sbjct 2468 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 2422 >seq18353 Length=6497 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || ||||||||||||||| Sbjct 837 CCTCCACGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 896 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || || || || | || || ||||| |||||| || Sbjct 897 AGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 956 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG- 16886 | |||||| ||||| || | ||||| || | | | |||| ||| |||| || Sbjct 957 ATGCCCTCCTTGTCCTGGATCTTTTGCTTAACGTTCTCGATCGTGT--CCGAGCTCTCGA 1014 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || ||||| || || || || || ||||| || |||||||| Sbjct 1015 CCTCGAGAGTAATGGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1063 >seq21899 Length=10926 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | || | | ||||||| || Sbjct 1992 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCATCCTCCAGCTGC 1933 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| || ||| || | ||||| ||||| ||| | Sbjct 1932 TTGCCGGCGAAGATCAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGAATCTTT 1873 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||||| || | | | |||||| | ||| || | ||||||||| || || || Sbjct 1872 TGCTTGACATTCTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTACCCGTG 1813 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 1812 AGGGTCTTGACGAAGATCTGCAT 1790 >seq11928 Length=172 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||||||||| || |||||||||||||||| ||| | | ||||| | || Sbjct 156 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCATCCTCAAGCTGC 97 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | ||||| ||||| || || ||| | ||||| ||||| || | | Sbjct 96 TTGCCGGCGAAGATAAGACGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTC 37 Query 16853 TGCTTCAC 16860 |||||||| Sbjct 36 TGCTTCAC 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404958709582120