Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq25728 93.3 5e-14 >seq25728 Length=6319 Score = 93.3 bits (102), Expect = 5e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 15047 ACGCCCGAGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGCACGTGCGGCAT 15105 ||||| |||||||||||||||| | || || |||| |||||||||||| ||||| Sbjct 4625 ACGCCTCAGATTGGCGACAAGTTCAGTTCGCGTCATGG-ACAAAAGGGCACGGTGGGCAT 4683 Query 15106 GATTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCAT 15165 || | || || || ||||||||||| | | |||||| || |||||||| ||| | Sbjct 4684 CATGTACCGACAAGAGGACATGCCCTTCAACATCGAAGGCATCACCCCCGACATCATCGT 4743 Query 15166 CAACCCCAACTGCATCCCGTCCCGCATGACCAT 15198 ||| ||| || ||||| || || |||||||| Sbjct 4744 CAATCCCCACGCTATCCCTTCTCGAATGACCAT 4776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611191860828800