Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq26184 96.9 7e-15 seq26134 96.9 7e-15 seq26078 96.9 7e-15 seq25598 96.9 7e-15 seq25509 96.9 7e-15 seq25170 96.9 7e-15 seq24811 96.9 7e-15 seq23556 96.9 7e-15 seq23408 96.9 7e-15 seq23401 96.9 7e-15 seq23018 96.9 7e-15 seq22810 96.9 7e-15 seq21805 96.9 7e-15 seq20813 96.9 7e-15 seq20601 96.9 7e-15 seq19657 96.9 7e-15 seq19543 96.9 7e-15 seq19542 96.9 7e-15 seq18053 96.9 7e-15 seq17386 96.9 7e-15 seq17385 96.9 7e-15 seq17113 96.9 7e-15 seq15724 96.9 7e-15 seq15640 96.9 7e-15 seq15142 96.9 7e-15 seq14859 96.9 7e-15 seq14858 96.9 7e-15 seq14808 96.9 7e-15 seq14501 96.9 7e-15 seq11119 93.3 9e-14 seq12049 87.8 4e-12 seq25033 84.2 4e-11 seq22501 84.2 4e-11 seq18569 84.2 4e-11 seq18298 84.2 4e-11 seq3682 84.2 4e-11 >seq26184 Length=46741 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 20775 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 20718 >seq26134 Length=8942 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 2759 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 2702 >seq26078 Length=43418 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 6113 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 6056 >seq25598 Length=2443 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 762 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 705 >seq25509 Length=2262 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 1535 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 1478 >seq25170 Length=8188 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 3117 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 3060 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 3920 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 3977 >seq24811 Length=89996 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 49118 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 49061 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 58653 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 58596 >seq23556 Length=12266 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 11544 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 11487 >seq23408 Length=2000 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 1057 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 1114 >seq23401 Length=141224 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 67742 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 67799 >seq23018 Length=970 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 830 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 887 >seq22810 Length=15108 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 9711 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 9654 >seq21805 Length=1961 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 940 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 883 >seq20813 Length=3292 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 904 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 961 >seq20601 Length=6111 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 5922 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 5865 >seq19657 Length=3278 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 2383 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 2326 >seq19543 Length=1942 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 1941 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 1884 >seq19542 Length=2690 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 1945 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 1888 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 2546 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 2489 >seq18053 Length=7615 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 1485 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 1428 >seq17386 Length=2346 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 877 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 820 >seq17385 Length=2367 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 888 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 831 >seq17113 Length=10578 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 261 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 318 >seq15724 Length=1106 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 843 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 786 >seq15640 Length=1411 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 684 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 627 >seq15142 Length=596 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 199 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 256 >seq14859 Length=2396 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 737 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 680 >seq14858 Length=2299 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 678 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 621 >seq14808 Length=1381 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 659 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 602 >seq14501 Length=900 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 687 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 630 >seq11119 Length=177 Score = 93.3 bits (102), Expect = 9e-14 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCC 142566 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 56 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCC 1 >seq12049 Length=157 Score = 87.8 bits (96), Expect = 4e-12 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 105 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 157 >seq25033 Length=6729 Score = 84.2 bits (92), Expect = 4e-11 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 51 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGA 1 >seq22501 Length=4165 Score = 84.2 bits (92), Expect = 4e-11 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 51 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGA 1 >seq18569 Length=4163 Score = 84.2 bits (92), Expect = 4e-11 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 4113 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGA 4163 >seq18298 Length=2423 Score = 84.2 bits (92), Expect = 4e-11 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2373 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGA 2423 >seq3682 Length=177 Score = 84.2 bits (92), Expect = 4e-11 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 142518 GTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 ||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 1 GTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027491926064108