Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq22622 170 5e-37 seq23693 167 6e-36 seq25321 159 8e-34 seq24868 158 3e-33 seq21073 152 1e-31 seq25697 150 4e-31 seq25702 149 1e-30 seq15340 143 6e-29 seq21899 134 3e-26 seq18580 131 4e-25 seq20369 118 3e-21 seq17696 118 3e-21 seq5102 109 1e-18 seq18353 104 6e-17 seq17601 102 2e-16 seq5915 93.3 1e-13 >seq22622 Length=4454 Score = 170 bits (188), Expect = 5e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || ||||| || | ||| || || ||||| || |||||||| Sbjct 1524 CCACCGCGCAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1465 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || ||||||||||||||||| || ||| Sbjct 1464 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGG 1405 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| |||||||| || || | ||||||||| || || Sbjct 1404 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATGGTATCGCTCGACTCAACC 1345 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| ||||| |||||||||||||||||||| |||||||| Sbjct 1344 TCGAGCGTGATGGTCTTACCGGTCAGAGTCTTGACGAAGATCTGCAT 1298 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| ||||| || | || || || ||||| || |||||||| Sbjct 1068 CCACCGCGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 1009 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||||||||||||||| || ||| Sbjct 1008 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGG 949 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| ||| ||||||||||| || | ||||| || || || Sbjct 948 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTCGCTGGACTCGACC 889 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || || || ||||||||||| |||||||| Sbjct 888 TCGAGAGTAATGGTCTTACCCGTAAGGGTCTTGACGAAGATCTGCAT 842 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 840 CCGCCGCGGAGACGGAGGACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGCG 781 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || || ||||| || ||||| ||| ||| Sbjct 780 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGG 721 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| |||||||| || || | ||||| || || || Sbjct 720 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTAGACTCGACC 661 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| ||||| ||||| || ||||| ||||| ||||||||| Sbjct 660 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 613 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| ||||| ||||| ||||| || | || || || |||||| Sbjct 1260 TCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 1201 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || ||||| || || || |||||||| ||| |||||||| Sbjct 1200 ATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 1141 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || ||||| || || ||||| || || || |||||| Sbjct 1140 TCGATCGTGTCCGAGCTC---TCGACCTCGAGAGTAATGGTCTTACCCGTGAGCGTCTTG 1084 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 1083 ACGAAGATCTGCAT 1070 >seq23693 Length=4026 Score = 167 bits (184), Expect = 6e-36 Identities = 177/232 (76%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | ||| ||||| || | ||| || || ||||| || |||| Sbjct 3110 CATG-CCGCCGCGGAGACGAAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGT 3168 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||||||||||||| ||||| || | || || || |||||||| || ||||| ||| Sbjct 3169 CGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGG 3228 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || |||||||| ||| |||||||| || || | ||||| || | Sbjct 3229 GAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACT 3288 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| ||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 3289 CGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3340 Score = 161 bits (178), Expect = 2e-34 Identities = 178/233 (76%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || || || | ||| ||||| || | ||| || || ||||| || |||| Sbjct 3338 CATG-CCTCCACGAAGGCGAAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 3396 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||||| ||||| ||||| || | || || || |||||||| || ||||| ||| | Sbjct 3397 CAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCAG 3456 Query 288362 CTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||||| ||||| || |||||||| ||| |||| |||||| || || | ||||||||| Sbjct 3457 GAGGGATGCCTTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATGGTATCGCTCGAC 3515 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || ||||| |||||||| ||||||||||| |||||||| Sbjct 3516 TCGACCTCGAGGGTAATGGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 3568 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| ||||| || || ||||| || | || || || |||||| Sbjct 3606 TCCTTATGGATGTTGTAGTCCGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 3665 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || ||||| || || || |||||||| ||| |||||||| Sbjct 3666 ATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 3725 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| || || ||||||||||| ||||| || || || ||||| ||| Sbjct 3726 TCGATGGTGTCGGACGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTCACG 3785 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 3786 AAGATCTGCATT 3797 >seq25321 Length=10237 Score = 159 bits (176), Expect = 8e-34 Identities = 180/236 (76%), Gaps = 9/236 (4%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | ||| ||||| || | || || || ||||| || |||| Sbjct 10138 CATG-CCACCGCGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGT 10080 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || ||||| ||||| || | || || || |||||||| |||||||| || | Sbjct 10079 CGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGG---T 10023 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTC 288417 | ||| || || || || |||||||| ||| |||| |||||| || || | ||||||| Sbjct 10022 CCGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATGGTATCGCTC 9964 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 9963 GACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 9908 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || ||||| |||| || || || ||||| || |||||||| || || || ||||| Sbjct 9891 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCC 9832 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || ||||||||||||||||| ||| ||||| || || || ||| Sbjct 9831 TCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCGGGAGGGATACCCTCCTTGTCC 9772 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| ||| ||||| || || || | ||| ||| || || ||||| ||||| ||| Sbjct 9771 TGGATCTTCTGCTTCACATTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 9712 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| |||||||| Sbjct 9711 TTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 9680 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 288310 GTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATT 288369 || || ||||| || | || || || ||||||||||||||||| ||| ||||| Sbjct 9502 GTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCGGGAGGGATA 9443 Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 || || || |||||||| ||| ||||| || || || | ||| ||| || || ||| Sbjct 9442 CCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATCGTGTCGGACGACTCGACCTCG 9383 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 9382 AGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 9339 >seq24868 Length=8702 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| |||| |||| || || ||||| || |||||||| Sbjct 7498 CCGCCGCGCAGACGGAGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 7439 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || |||||||| |||||||| || ||| Sbjct 7438 AGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 7379 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| ||| |||||||| || || | ||||| || || || Sbjct 7378 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTAGACTCGACC 7319 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| |||||||||||||||||||| |||||||| Sbjct 7318 TCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 7272 Score = 143 bits (158), Expect = 6e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| ||||| || | |||| || || ||||| || ||||| ||| Sbjct 7270 CCGCCACGCAGACGAAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCG 7211 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 7210 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 7151 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| ||| |||| |||||| || || | |||||||| || || Sbjct 7150 ATGCCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATCGTGTCGCTCGACTCGAC 7092 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 7091 CTCGAGAGTGATGGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 7044 >seq21073 Length=984 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | || || || ||||| || |||||||| Sbjct 758 CCGCCGCGCAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 817 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| |||||||| || ||| Sbjct 818 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 877 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| |||||||| || || | ||||||||| || || Sbjct 878 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATGGTATCGCTCGACTCGACC 937 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| |||||||||||||||||||| |||||||| Sbjct 938 TCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 984 >seq25697 Length=27391 Score = 150 bits (166), Expect = 4e-31 Identities = 172/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| ||||| |||| || || || ||||| || ||||||||| Sbjct 15221 CCACCGCGCAGACGAAGGACGAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 15162 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| || || ||| Sbjct 15161 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGG---TCCGGG 15105 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| ||| |||||||| || || | ||| ||| || Sbjct 15104 GGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGGACGACTCG 15045 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 15044 ACCTCGAGGGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 14995 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| |||| || || || ||||| || ||||| ||| Sbjct 14765 CCGCCGCGCAGACGGAGGACGAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCG 14706 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| |||||||| | || || || |||||||| |||||||| ||| ||| Sbjct 14705 AGCGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGGAGGG 14646 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| ||| |||||||| || || | ||| ||| || || Sbjct 14645 ATGCCCTCCTTATCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGGACGACTCGACC 14586 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 14585 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 14539 >seq25702 Length=8093 Score = 149 bits (164), Expect = 1e-30 Identities = 174/231 (75%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | |||| || || ||||| || ||||| ||| Sbjct 2119 CCGCCGCGCAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCG 2178 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||||||||||||||| || || ||| Sbjct 2179 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---GTCCGGG 2235 Query 288367 ---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || || || |||||||| ||| || |||||||| || || | |||||||| || Sbjct 2236 GGAATACCCTCCTTGTCCTGGATCTTTTGC-TTCACGTTCTCGATCGTGTCGCTCGACTC 2294 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 2295 GACCTCGAGAGTGATGGTCTTACCCGTGAGCGTCTTGACGAAGATCTGCAT 2345 Score = 141 bits (156), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| ||||| || | || || || ||||| || ||||||||| Sbjct 2670 CCGCCACGCAGACGAAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 2729 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || ||||||||||||||||| || ||| Sbjct 2730 AGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGG 2789 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || |||||||| || || | |||||||| || || Sbjct 2790 ATGCCCTCCTTGTCCTGGATCTTYTGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACC 2849 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 2850 TCGAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 2896 Score = 132 bits (146), Expect = 1e-25 Identities = 174/237 (73%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || || || | || ||||| |||| || || || ||||| || |||| Sbjct 2894 CATG-CCTCCACGAAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGT 2952 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||||||||||| ||||| || | || || || |||||||| || ||||| || Sbjct 2953 CAGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCG 3012 Query 288362 CTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||||| || || || |||||||| ||| || |||||||| || || | |||||||| Sbjct 3013 GGGGGATACCCTCCTTGTCCTGGATCTTTTGC-TTCACGTTCTCGATCGTGTCGCTCGAC 3071 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||| || || ||||| || || || ||||| ||||| ||||||||| || Sbjct 3072 TCGACCTCGAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATTGTG 3128 Score = 100 bits (110), Expect = 7e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| ||| |||||||| || || | ||| ||| || Sbjct 2559 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGGACGACTCA 2618 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| |||||||||||||||||||| |||||||| Sbjct 2619 ACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2668 Score = 89.7 bits (98), Expect = 1e-12 Identities = 110/149 (74%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| || | |||| || || ||||| ||||||||||| Sbjct 2347 CCACCGCGGAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTATAGTCGGCC 2406 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| ||| ||| Sbjct 2407 AGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCGGGAGGG 2466 Query 288367 ATTCCTTCTTTATCCTGGATTTTC-GCTT 288394 || || || || |||||||| ||| |||| Sbjct 2467 ATGCCCTCCTTGTCCTGGATCTTCTGCTT 2495 >seq15340 Length=11482 Score = 143 bits (158), Expect = 6e-29 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | || || || ||||| || |||||||| Sbjct 220 CCGCCGCGCAGGCGGAGSACGAGGTGGAGSGTSGACTCCTTCTGGATGTTGTAGTCGGCC 279 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| || ||| Sbjct 280 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGG 339 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| |||||||| || || | ||| ||| || ||| Sbjct 340 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGGACGACTCGACT 399 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| ||||| || ||||| |||||||| || |||||||| Sbjct 400 TCGAGCGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 446 Score = 141 bits (156), Expect = 2e-28 Identities = 172/233 (74%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | ||| ||||| || | |||| || || ||||| || |||| Sbjct 672 CATG-CCGCCGCGCAGGCGAAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGT 730 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || || || ||||| || | || || || |||||||| || ||||| || Sbjct 731 CGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGGCGCTGCTGGTCCG 790 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || |||||||| ||| |||||||| || || | ||||| || | Sbjct 791 GAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATGGTGTCGCTGGACT 850 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | || ||||| ||||| ||||| || || || ||||||||||| ||||||||| Sbjct 851 CGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATT 903 >seq21899 Length=10926 Score = 134 bits (148), Expect = 3e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| || | ||| || || ||||| || ||||| ||| Sbjct 2016 CCACCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCG 1957 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || ||||||||||||||||| ||| ||| Sbjct 1956 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCCGGGGGG 1897 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || ||||| || ||| |||| || || || || | ||| ||| || || Sbjct 1896 ATACCCTCCTTGTCCTGAATCTTTTGCTTG-ACATTCTCGATGGTGTCGGACGACTCAAC 1838 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 1837 CTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1790 >seq18580 Length=2690 Score = 131 bits (144), Expect = 4e-25 Identities = 169/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || || || | ||| ||||| |||| || || || ||||| || |||| Sbjct 2652 CATG-CCTCCACGAAGGCGAAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGT 2594 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||||||||||||| ||||| || | || || || |||||||| || ||||| || Sbjct 2593 CGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCG 2534 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || |||||||| ||| ||||| || || || | ||| ||| | Sbjct 2533 GGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATGGTGTCGGACGACT 2474 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 2473 CGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 2422 >seq20369 Length=2600 Score = 118 bits (130), Expect = 3e-21 Identities = 141/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||| ||||| || || ||||| || | || || || ||||||||| Sbjct 1782 TTCTGGATGTTGTAGTCAGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 1841 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTC 288404 |||||||| ||| ||||| || || || ||||| || ||| || || || || || Sbjct 1842 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGAATCTTTTGC-TTGACATTCTC 1900 Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | ||| ||| || || ||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 1901 GATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTACCGGTGAGGGTCTTCACGAA 1960 Query 288465 TATCTGCAT 288473 |||||||| Sbjct 1961 GATCTGCAT 1969 >seq17696 Length=2611 Score = 118 bits (130), Expect = 3e-21 Identities = 141/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||| ||||| || || ||||| || | || || || ||||||||| Sbjct 819 TTCTGGATGTTGTAGTCAGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 760 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTC 288404 |||||||| ||| ||||| || || || ||||| || ||| || || || || || Sbjct 759 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGAATCTTTTGC-TTGACATTCTC 701 Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | ||| ||| || || ||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 700 GATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTACCGGTGAGGGTCTTCACGAA 641 Query 288465 TATCTGCAT 288473 |||||||| Sbjct 640 GATCTGCAT 632 >seq5102 Length=139 Score = 109 bits (120), Expect = 1e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| ||| |||||||| || || | |||||| || || Sbjct 23 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATGGTATCGCTGGACTCG 82 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| |||||||||||||||||||| |||||||| Sbjct 83 ACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 132 >seq18353 Length=6497 Score = 104 bits (114), Expect = 6e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| ||||| || | || || || ||||| || |||||||| Sbjct 837 CCTCCACGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 896 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 897 AGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 956 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || || || || |||||||| ||| |||| ||||| || || | || |||| || Sbjct 957 ATGCCCTCCTTGTCCTGGATCTTTTGCTTA-ACGTTCTCGATCGTGTCCGAGCTC---TC 1012 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| || || || ||||||||||| |||||||| Sbjct 1013 GACCTCGAGAGTAATGGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1063 >seq17601 Length=6497 Score = 102 bits (112), Expect = 2e-16 Identities = 164/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| ||||| || | || || || ||||| || ||||| ||| Sbjct 5661 CCTCCACGCAGGCGAAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCG 5602 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || || ||| Sbjct 5601 AGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGG---TCCGGG 5545 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || |||||||| ||| |||||||| || || | || |||| Sbjct 5544 GGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGCTC--- 5488 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| || || || ||||||||||| |||||||| Sbjct 5487 TCGACCTCAAGAGTAATGGTCTTACCCGTGAGCGTCTTGACGAAGATCTGCAT 5435 >seq5915 Length=124 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 || || |||||||| ||| |||||||| || || | ||| ||| || || ||||| Sbjct 123 TCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGA 64 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||||||||||||||| |||||||| Sbjct 63 GTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179258586135464