Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq25559 127 5e-24 >seq25559 Length=72922 Score = 127 bits (140), Expect = 5e-24 Identities = 293/433 (68%), Gaps = 10/433 (2%) Strand=Plus/Plus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348 ||||| ||||||||||||| | | ||| || || || | || || || || ||| Sbjct 47572 TTTGCCGAGCGTCTCGTCGGGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCAGCTTC 47631 Query 243349 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTC--TAACG 243406 ||| ||||||| ||||| ||| || | ||||| ||||| || || || ||||| Sbjct 47632 TGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCT-GGCCT-TCAGTAACG 47689 Query 243407 AGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCG-GTGAGCTTATGTATTCAAAG 243465 | | ||||| |||||||||||||| ||| | || | ||| || | || | | | Sbjct 47690 AAATGATCAGCCGCGACGAGGGCCTCCACTGCGACTTTGCGTGC-CTCCTCTACACCATG 47748 Query 243466 CTCCAGAACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAAC 243525 ||| ||||||| | ||| | ||| || |||||| || || || || | | Sbjct 47749 CTCGTCAACAAGCCCTCCACCGACGTGCCCAAGCAGATCATCCTCGAGGCCGTCGAGATC 47808 Query 243526 GAAAAGGAATTCATTTGCGA--CGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAAC 243583 || ||||| || | ||| |||| | ||| || || ||||||||| | | | Sbjct 47809 GAGAAGGAGTTTGTCACCGAGTCGCTCCCCGTCGCC--CTCATCGGCATGAACGCCGCGC 47866 Query 243584 TCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGA 243643 ||||| | ||||||||||| ||||| || |||||| || || |||| || || | || | Sbjct 47867 TCATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTTCTCGTCGCTCTCGGCTGCGACA 47926 Query 243644 AAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAA 243703 | |||||| | ||||| || ||| |||||||||||||| || | || || | Sbjct 47927 AGCACTACAACCAGACCAACCCGTTCCCCTGGATGGAGCTCATTTCCCTCGAGGGCAAGA 47986 Query 243704 CTAACTTCTTCGA 243716 | ||||||||||| Sbjct 47987 CCAACTTCTTCGA 47999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102509946537800