Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq20556 165 1e-35 seq20316 165 1e-35 seq18771 165 1e-35 seq18770 165 1e-35 seq25559 104 3e-17 >seq20556 Length=15276 Score = 165 bits (182), Expect = 1e-35 Identities = 862/1361 (63%), Gaps = 36/1361 (3%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| |||| ||||||||| | ||||| |||| Sbjct 12918 CGGAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCATAGAAGTGCATCGAGGTG 12977 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||||| | | || ||||| ||| ||| | ||| || || ||| || Sbjct 12978 AGCTTGGCAAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCAATGTAG 13037 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || ||||| || || | | | || |||||||| || || Sbjct 13038 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGGGGAATCTCCCACACGGTCTTG 13097 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACC-TGCCTT 115796 || || |||| || || || ||||| ||| |||| |||| |||||| ||| Sbjct 13098 TACAGCCTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACAGAGCCGTTGTGCGAA 13157 Query 115797 --GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACG 115854 || | || | ||| | | | |||||| || || ||||| || || Sbjct 13158 ACGAGCTTG---TTCTTGAGGGCAGGCGTCCAGAGGCCGCGCTCGTTGAGCTCACGCAGC 13214 Query 115855 AGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTC 115914 || || | ||||| || || || || |||||| |||| | |||||||||| Sbjct 13215 AGATGGTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGAG 13274 Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 115974 ||||| ||||| |||||||| ||||| || | ||| || | || || || ||||||||| Sbjct 13275 GTGTAGGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTCGAAGCCGTGGGCATG 13334 Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCC 116034 || |||| ||| || ||| | |||||| | | ||| | ||||| | || Sbjct 13335 GGCGCCACGAGGAGCGAGTTCCTGAGACCGTGCTCGGCGATGTTGGCGCGGAGGGTGGCC 13394 Query 116035 CAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGAC 116094 ||||| | || | | | | ||| | || |||||| | || || || Sbjct 13395 CAGTCCCACATGTCCGAGGGAGTGACGTTCCAGAGGTCGGGCTGGAGCCTGCCCTGCGAG 13454 Query 116095 GCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTC 116151 || ||||| ||||| | |||| || | |||||| |||| ||||| ||| ||| Sbjct 13455 GCGGGCGAACCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGAGCCAACTCGTTCGAG--- 13511 Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAAT-GCGAGCATTCATTGCCTTGGCCTC 116210 || ||||||| |||| || || ||||| || || ||| | || | | ||||| Sbjct 13512 GCAACGAGGGCGGCGTAGTAGATGGTCTCGAAGATCGCGCG-GTTGAGCTCGCGAGCCTC 13570 Query 116211 GTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 116270 | || ||| | |||| | || || || || || ||||| || || |||| Sbjct 13571 AGGGCTCTCCCACGGGTGACGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCGAT 13630 Query 116271 GCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATT 116327 ||| || || | || | ||| || || || || || ||| ||| || || | || Sbjct 13631 GCCGATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGATCACCGGGTAGTAGTT 13687 Query 116328 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 | ||||| ||| | || || || || ||||| ||||| | || || ||||| | Sbjct 13688 GATGTCGATCACCTTGTTGAGGTTCTTAGTGACGACCTTGACAACGTCGTGCAGCTTCTT 13747 Query 116388 GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 116447 || ||||| ||| | | ||| |||| || ||||||| || |||| || Sbjct 13748 GTGGTCAAACTTGC------CGTTGGTGATGAACTTGGGCAGGGCGAGCGAGGCCAAGTT 13801 Query 116448 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 116507 ||||| | ||| || ||||||| | || || || |||| || || Sbjct 13802 GCACACGGCCACCTCGTCGGGCGACGTGTACTGCACAACCTCAGTGCACAGGTTCGACGA 13861 Query 116508 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCAT 116567 || |||||||| | || || || || ||||| ||| || || |||||||| ||||| Sbjct 13862 CTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCAT 13921 Query 116568 ATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--T 116625 || ||||| || ||||| | || |||| ||| || || ||| | || ||| | Sbjct 13922 GTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTT 13981 Query 116626 GGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCT 116685 | | | |||| ||| || ||||| |||||| ||| |||| || | Sbjct 13982 GACCACGCGGCG--GGCGCGGCCCTCGCTCTCGTAGCGCTCGTACTTCTCCTCGAAGACC 14039 Query 116686 TCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCA 116745 | |||| | || | || || || |||| | || |||||||| ||||| | ||| Sbjct 14040 TTACCCCACGAGTCAAACAGACCAGGGGCCTCGTTGGGGCAGAAGAGCGACCAGTCGCCA 14099 Query 116746 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCG 116804 || ||| || |||||||||||||| || ||||||||||| |||| |||||||||| || Sbjct 14100 CCAGACTCCACGCGCTTCATGAAGAGATCGGGGATCCAGAG-GCCGTAGAAGAGATCGCG 14158 Query 116805 ACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 116862 ||| | |||| || | || || || | | | ||||| | ||| ||| Sbjct 14159 --GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTGAGGTTGAGGAAGTCAAAGATGTCC 14216 Query 116863 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 |||||||| || || ||||| | || | | |||||||| Sbjct 14217 GCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCCTTGCG 14257 Score = 136 bits (150), Expect = 5e-27 Identities = 252/368 (68%), Gaps = 4/368 (1%) Strand=Plus/Plus Query 116914 TGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGAT 116973 |||| ||||| | ||| || |||| | ||||| ||||| || |||| ||| | || Sbjct 14346 TGGTCGACATAGCGCGCAGTGTCGTTGTACACGCGGAGCATGGGGATGAGACCGTTCGAG 14405 Query 116974 TGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATAC 117031 ||| || || || ||||| ||||| ||| ||| | || |||| || || Sbjct 14406 GTGCCGTTGGTGCCGCGAATGTACGAG--TTGGAGGCGCGGATGCGGTGGCAAGCCAGAC 14463 Query 117032 CAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCAT 117091 | || || || ||| |||| ||||| | ||||||| | |||| || | ||||| || | Sbjct 14464 CGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCATAGATGCCCT 14523 Query 117092 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTAC 117151 |||||||||| |||| | | | ||||||||| ||||| || || | || || | Sbjct 14524 CGATCGAGTCCTCCTTCATCGTCAGGAGGAAGCACGACGACAGCTGCGGGCGCGGAGTGC 14583 Query 117152 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGG 117211 | |||||||| ||||| || || |||||| |||| | || || | | ||||||| Sbjct 14584 CGGCGTTGAACAGGGTCGGGGTGGCGTGGGTGAAGAGCTGCTGCGAGAGCAGGTCGTAGG 14643 Query 117212 TCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271 |||| | || | ||| |||| ||| ||| | ||||| | ||| ||||| | ||||| Sbjct 14644 TCTCGATCACCGCGGGGATGTTGTCCTTGTGCAGGCCGATGGCGACGCGCATGAGCATGT 14703 Query 117272 ATTGGGGT 117279 |||||| Sbjct 14704 GCTGGGGT 14711 >seq20316 Length=17165 Score = 165 bits (182), Expect = 1e-35 Identities = 862/1361 (63%), Gaps = 36/1361 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| |||| ||||||||| | ||||| |||| Sbjct 6950 CGGAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCATAGAAGTGCATCGAGGTG 6891 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||||| | | || ||||| ||| ||| | ||| || || ||| || Sbjct 6890 AGCTTGGCAAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCAATGTAG 6831 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || ||||| || || | | | || |||||||| || || Sbjct 6830 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGGGGAATCTCCCACACGGTCTTG 6771 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACC-TGCCTT 115796 || || |||| || || || ||||| ||| |||| |||| |||||| ||| Sbjct 6770 TACAGCCTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACAGAGCCGTTGTGCGAA 6711 Query 115797 --GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACG 115854 || | || | ||| | | | |||||| || || ||||| || || Sbjct 6710 ACGAGCTTG---TTCTTGAGGGCAGGCGTCCAGAGGCCGCGCTCGTTGAGCTCACGCAGC 6654 Query 115855 AGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTC 115914 || || | ||||| || || || || |||||| |||| | |||||||||| Sbjct 6653 AGATGGTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGAG 6594 Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 115974 ||||| ||||| |||||||| ||||| || | ||| || | || || || ||||||||| Sbjct 6593 GTGTAGGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTCGAAGCCGTGGGCATG 6534 Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCC 116034 || |||| ||| || ||| | |||||| | | ||| | ||||| | || Sbjct 6533 GGCGCCACGAGGAGCGAGTTCCTGAGACCGTGCTCGGCGATGTTGGCGCGGAGGGTGGCC 6474 Query 116035 CAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGAC 116094 ||||| | || | | | | ||| | || |||||| | || || || Sbjct 6473 CAGTCCCACATGTCCGAGGGAGTGACGTTCCAGAGGTCGGGCTGGAGCCTGCCCTGCGAG 6414 Query 116095 GCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTC 116151 || ||||| ||||| | |||| || | |||||| |||| ||||| ||| ||| Sbjct 6413 GCGGGCGAACCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGAGCCAACTCGTTCGAG--- 6357 Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAAT-GCGAGCATTCATTGCCTTGGCCTC 116210 || ||||||| |||| || || ||||| || || ||| | || | | ||||| Sbjct 6356 GCAACGAGGGCGGCGTAGTAGATGGTCTCGAAGATCGCGCG-GTTGAGCTCGCGAGCCTC 6298 Query 116211 GTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 116270 | || ||| | |||| | || || || || || ||||| || || |||| Sbjct 6297 AGGGCTCTCCCACGGGTGACGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCGAT 6238 Query 116271 GCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATT 116327 ||| || || | || | ||| || || || || || ||| ||| || || | || Sbjct 6237 GCCGATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGATCACCGGGTAGTAGTT 6181 Query 116328 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 | ||||| ||| | || || || || ||||| ||||| | || || ||||| | Sbjct 6180 GATGTCGATCACCTTGTTGAGGTTCTTAGTGACGACCTTGACAACGTCGTGCAGCTTCTT 6121 Query 116388 GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 116447 || ||||| ||| | | ||| |||| || ||||||| || |||| || Sbjct 6120 GTGGTCAAACTTGC------CGTTGGTGATGAACTTGGGCAGGGCGAGCGAGGCCAAGTT 6067 Query 116448 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 116507 ||||| | ||| || ||||||| | || || || |||| || || Sbjct 6066 GCACACGGCCACCTCGTCGGGCGACGTGTACTGCACAACCTCAGTGCACAGGTTCGACGA 6007 Query 116508 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCAT 116567 || |||||||| | || || || || ||||| ||| || || |||||||| ||||| Sbjct 6006 CTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCAT 5947 Query 116568 ATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--T 116625 || ||||| || ||||| | || |||| ||| || || ||| | || ||| | Sbjct 5946 GTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTT 5887 Query 116626 GGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCT 116685 | | | |||| ||| || ||||| |||||| ||| |||| || | Sbjct 5886 GACCACGCGGCG--GGCGCGGCCCTCGCTCTCGTAGCGCTCGTACTTCTCCTCGAAGACC 5829 Query 116686 TCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCA 116745 | |||| | || | || || || |||| | || |||||||| ||||| | ||| Sbjct 5828 TTACCCCACGAGTCAAACAGACCAGGGGCCTCGTTGGGGCAGAAGAGCGACCAGTCGCCA 5769 Query 116746 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCG 116804 || ||| || |||||||||||||| || ||||||||||| |||| |||||||||| || Sbjct 5768 CCAGACTCCACGCGCTTCATGAAGAGATCGGGGATCCAGAG-GCCGTAGAAGAGATCGCG 5710 Query 116805 ACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 116862 ||| | |||| || | || || || | | | ||||| | ||| ||| Sbjct 5709 --GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTGAGGTTGAGGAAGTCAAAGATGTCC 5652 Query 116863 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 |||||||| || || ||||| | || | | |||||||| Sbjct 5651 GCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCCTTGCG 5611 Score = 136 bits (150), Expect = 5e-27 Identities = 252/368 (68%), Gaps = 4/368 (1%) Strand=Plus/Minus Query 116914 TGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGAT 116973 |||| ||||| | ||| || |||| | ||||| ||||| || |||| ||| | || Sbjct 5522 TGGTCGACATAGCGCGCAGTGTCGTTGTACACGCGGAGCATGGGGATGAGACCGTTCGAG 5463 Query 116974 TGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATAC 117031 ||| || || || ||||| ||||| ||| ||| | || |||| || || Sbjct 5462 GTGCCGTTGGTGCCGCGAATGTACGAG--TTGGAGGCGCGGATGCGGTGGCAAGCCAGAC 5405 Query 117032 CAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCAT 117091 | || || || ||| |||| ||||| | ||||||| | |||| || | ||||| || | Sbjct 5404 CGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCATAGATGCCCT 5345 Query 117092 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTAC 117151 |||||||||| |||| | | | ||||||||| ||||| || || | || || | Sbjct 5344 CGATCGAGTCCTCCTTCATCGTCAGGAGGAAGCACGACGACAGCTGCGGGCGCGGAGTGC 5285 Query 117152 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGG 117211 | |||||||| ||||| || || |||||| |||| | || || | | ||||||| Sbjct 5284 CGGCGTTGAACAGGGTCGGGGTGGCGTGGGTGAAGAGCTGCTGCGAGAGCAGGTCGTAGG 5225 Query 117212 TCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271 |||| | || | ||| |||| ||| ||| | ||||| | ||| ||||| | ||||| Sbjct 5224 TCTCGATCACCGCGGGGATGTTGTCCTTGTGCAGGCCGATGGCGACGCGCATGAGCATGT 5165 Query 117272 ATTGGGGT 117279 |||||| Sbjct 5164 GCTGGGGT 5157 >seq18771 Length=17162 Score = 165 bits (182), Expect = 1e-35 Identities = 862/1361 (63%), Gaps = 36/1361 (3%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| |||| ||||||||| | ||||| |||| Sbjct 10216 CGGAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCATAGAAGTGCATCGAGGTG 10275 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||||| | | || ||||| ||| ||| | ||| || || ||| || Sbjct 10276 AGCTTGGCAAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCAATGTAG 10335 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || ||||| || || | | | || |||||||| || || Sbjct 10336 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGGGGAATCTCCCACACGGTCTTG 10395 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACC-TGCCTT 115796 || || |||| || || || ||||| ||| |||| |||| |||||| ||| Sbjct 10396 TACAGCCTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACAGAGCCGTTGTGCGAA 10455 Query 115797 --GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACG 115854 || | || | ||| | | | |||||| || || ||||| || || Sbjct 10456 ACGAGCTTG---TTCTTGAGGGCAGGCGTCCAGAGGCCGCGCTCGTTGAGCTCACGCAGC 10512 Query 115855 AGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTC 115914 || || | ||||| || || || || |||||| |||| | |||||||||| Sbjct 10513 AGATGGTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGAG 10572 Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 115974 ||||| ||||| |||||||| ||||| || | ||| || | || || || ||||||||| Sbjct 10573 GTGTAGGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTCGAAGCCGTGGGCATG 10632 Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCC 116034 || |||| ||| || ||| | |||||| | | ||| | ||||| | || Sbjct 10633 GGCGCCACGAGGAGCGAGTTCCTGAGACCGTGCTCGGCGATGTTGGCGCGGAGGGTGGCC 10692 Query 116035 CAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGAC 116094 ||||| | || | | | | ||| | || |||||| | || || || Sbjct 10693 CAGTCCCACATGTCCGAGGGAGTGACGTTCCAGAGGTCGGGCTGGAGCCTGCCCTGCGAG 10752 Query 116095 GCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTC 116151 || ||||| ||||| | |||| || | |||||| |||| ||||| ||| ||| Sbjct 10753 GCGGGCGAACCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGAGCCAACTCGTTCGAG--- 10809 Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAAT-GCGAGCATTCATTGCCTTGGCCTC 116210 || ||||||| |||| || || ||||| || || ||| | || | | ||||| Sbjct 10810 GCAACGAGGGCGGCGTAGTAGATGGTCTCGAAGATCGCGCG-GTTGAGCTCGCGAGCCTC 10868 Query 116211 GTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 116270 | || ||| | |||| | || || || || || ||||| || || |||| Sbjct 10869 AGGGCTCTCCCACGGGTGACGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCGAT 10928 Query 116271 GCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATT 116327 ||| || || | || | ||| || || || || || ||| ||| || || | || Sbjct 10929 GCCGATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGATCACCGGGTAGTAGTT 10985 Query 116328 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 | ||||| ||| | || || || || ||||| ||||| | || || ||||| | Sbjct 10986 GATGTCGATCACCTTGTTGAGGTTCTTAGTGACGACCTTGACAACGTCGTGCAGCTTCTT 11045 Query 116388 GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 116447 || ||||| ||| | | ||| |||| || ||||||| || |||| || Sbjct 11046 GTGGTCAAACTTGC------CGTTGGTGATGAACTTGGGCAGGGCGAGCGAGGCCAAGTT 11099 Query 116448 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 116507 ||||| | ||| || ||||||| | || || || |||| || || Sbjct 11100 GCACACGGCCACCTCGTCGGGCGACGTGTACTGCACAACCTCAGTGCACAGGTTCGACGA 11159 Query 116508 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCAT 116567 || |||||||| | || || || || ||||| ||| || || |||||||| ||||| Sbjct 11160 CTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCAT 11219 Query 116568 ATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--T 116625 || ||||| || ||||| | || |||| ||| || || ||| | || ||| | Sbjct 11220 GTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTT 11279 Query 116626 GGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCT 116685 | | | |||| ||| || ||||| |||||| ||| |||| || | Sbjct 11280 GACCACGCGGCG--GGCGCGGCCCTCGCTCTCGTAGCGCTCGTACTTCTCCTCGAAGACC 11337 Query 116686 TCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCA 116745 | |||| | || | || || || |||| | || |||||||| ||||| | ||| Sbjct 11338 TTACCCCACGAGTCAAACAGACCAGGGGCCTCGTTGGGGCAGAAGAGCGACCAGTCGCCA 11397 Query 116746 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCG 116804 || ||| || |||||||||||||| || ||||||||||| |||| |||||||||| || Sbjct 11398 CCAGACTCCACGCGCTTCATGAAGAGATCGGGGATCCAGAG-GCCGTAGAAGAGATCGCG 11456 Query 116805 ACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 116862 ||| | |||| || | || || || | | | ||||| | ||| ||| Sbjct 11457 --GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTGAGGTTGAGGAAGTCAAAGATGTCC 11514 Query 116863 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 |||||||| || || ||||| | || | | |||||||| Sbjct 11515 GCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCCTTGCG 11555 Score = 136 bits (150), Expect = 5e-27 Identities = 252/368 (68%), Gaps = 4/368 (1%) Strand=Plus/Plus Query 116914 TGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGAT 116973 |||| ||||| | ||| || |||| | ||||| ||||| || |||| ||| | || Sbjct 11644 TGGTCGACATAGCGCGCAGTGTCGTTGTACACGCGGAGCATGGGGATGAGACCGTTCGAG 11703 Query 116974 TGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATAC 117031 ||| || || || ||||| ||||| ||| ||| | || |||| || || Sbjct 11704 GTGCCGTTGGTGCCGCGAATGTACGAG--TTGGAGGCGCGGATGCGGTGGCAAGCCAGAC 11761 Query 117032 CAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCAT 117091 | || || || ||| |||| ||||| | ||||||| | |||| || | ||||| || | Sbjct 11762 CGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCATAGATGCCCT 11821 Query 117092 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTAC 117151 |||||||||| |||| | | | ||||||||| ||||| || || | || || | Sbjct 11822 CGATCGAGTCCTCCTTCATCGTCAGGAGGAAGCACGACGACAGCTGCGGGCGCGGAGTGC 11881 Query 117152 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGG 117211 | |||||||| ||||| || || |||||| |||| | || || | | ||||||| Sbjct 11882 CGGCGTTGAACAGGGTCGGGGTGGCGTGGGTGAAGAGCTGCTGCGAGAGCAGGTCGTAGG 11941 Query 117212 TCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271 |||| | || | ||| |||| ||| ||| | ||||| | ||| ||||| | ||||| Sbjct 11942 TCTCGATCACCGCGGGGATGTTGTCCTTGTGCAGGCCGATGGCGACGCGCATGAGCATGT 12001 Query 117272 ATTGGGGT 117279 |||||| Sbjct 12002 GCTGGGGT 12009 >seq18770 Length=15255 Score = 165 bits (182), Expect = 1e-35 Identities = 862/1361 (63%), Gaps = 36/1361 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| |||| ||||||||| | ||||| |||| Sbjct 2359 CGGAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCATAGAAGTGCATCGAGGTG 2300 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||||| | | || ||||| ||| ||| | ||| || || ||| || Sbjct 2299 AGCTTGGCAAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCAATGTAG 2240 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || ||||| || || | | | || |||||||| || || Sbjct 2239 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGGGGAATCTCCCACACGGTCTTG 2180 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACC-TGCCTT 115796 || || |||| || || || ||||| ||| |||| |||| |||||| ||| Sbjct 2179 TACAGCCTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACAGAGCCGTTGTGCGAA 2120 Query 115797 --GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACG 115854 || | || | ||| | | | |||||| || || ||||| || || Sbjct 2119 ACGAGCTTG---TTCTTGAGGGCAGGCGTCCAGAGGCCGCGCTCGTTGAGCTCACGCAGC 2063 Query 115855 AGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTC 115914 || || | ||||| || || || || |||||| |||| | |||||||||| Sbjct 2062 AGATGGTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGAG 2003 Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 115974 ||||| ||||| |||||||| ||||| || | ||| || | || || || ||||||||| Sbjct 2002 GTGTAGGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTCGAAGCCGTGGGCATG 1943 Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCC 116034 || |||| ||| || ||| | |||||| | | ||| | ||||| | || Sbjct 1942 GGCGCCACGAGGAGCGAGTTCCTGAGACCGTGCTCGGCGATGTTGGCGCGGAGGGTGGCC 1883 Query 116035 CAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGAC 116094 ||||| | || | | | | ||| | || |||||| | || || || Sbjct 1882 CAGTCCCACATGTCCGAGGGAGTGACGTTCCAGAGGTCGGGCTGGAGCCTGCCCTGCGAG 1823 Query 116095 GCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTC 116151 || ||||| ||||| | |||| || | |||||| |||| ||||| ||| ||| Sbjct 1822 GCGGGCGAACCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGAGCCAACTCGTTCGAG--- 1766 Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAAT-GCGAGCATTCATTGCCTTGGCCTC 116210 || ||||||| |||| || || ||||| || || ||| | || | | ||||| Sbjct 1765 GCAACGAGGGCGGCGTAGTAGATGGTCTCGAAGATCGCGCG-GTTGAGCTCGCGAGCCTC 1707 Query 116211 GTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 116270 | || ||| | |||| | || || || || || ||||| || || |||| Sbjct 1706 AGGGCTCTCCCACGGGTGACGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCGAT 1647 Query 116271 GCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATT 116327 ||| || || | || | ||| || || || || || ||| ||| || || | || Sbjct 1646 GCCGATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGATCACCGGGTAGTAGTT 1590 Query 116328 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 | ||||| ||| | || || || || ||||| ||||| | || || ||||| | Sbjct 1589 GATGTCGATCACCTTGTTGAGGTTCTTAGTGACGACCTTGACAACGTCGTGCAGCTTCTT 1530 Query 116388 GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 116447 || ||||| ||| | | ||| |||| || ||||||| || |||| || Sbjct 1529 GTGGTCAAACTTGC------CGTTGGTGATGAACTTGGGCAGGGCGAGCGAGGCCAAGTT 1476 Query 116448 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 116507 ||||| | ||| || ||||||| | || || || |||| || || Sbjct 1475 GCACACGGCCACCTCGTCGGGCGACGTGTACTGCACAACCTCAGTGCACAGGTTCGACGA 1416 Query 116508 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCAT 116567 || |||||||| | || || || || ||||| ||| || || |||||||| ||||| Sbjct 1415 CTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCAT 1356 Query 116568 ATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--T 116625 || ||||| || ||||| | || |||| ||| || || ||| | || ||| | Sbjct 1355 GTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTT 1296 Query 116626 GGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCT 116685 | | | |||| ||| || ||||| |||||| ||| |||| || | Sbjct 1295 GACCACGCGGCG--GGCGCGGCCCTCGCTCTCGTAGCGCTCGTACTTCTCCTCGAAGACC 1238 Query 116686 TCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCA 116745 | |||| | || | || || || |||| | || |||||||| ||||| | ||| Sbjct 1237 TTACCCCACGAGTCAAACAGACCAGGGGCCTCGTTGGGGCAGAAGAGCGACCAGTCGCCA 1178 Query 116746 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCG 116804 || ||| || |||||||||||||| || ||||||||||| |||| |||||||||| || Sbjct 1177 CCAGACTCCACGCGCTTCATGAAGAGATCGGGGATCCAGAG-GCCGTAGAAGAGATCGCG 1119 Query 116805 ACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 116862 ||| | |||| || | || || || | | | ||||| | ||| ||| Sbjct 1118 --GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTGAGGTTGAGGAAGTCAAAGATGTCC 1061 Query 116863 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 |||||||| || || ||||| | || | | |||||||| Sbjct 1060 GCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCCTTGCG 1020 Score = 136 bits (150), Expect = 5e-27 Identities = 252/368 (68%), Gaps = 4/368 (1%) Strand=Plus/Minus Query 116914 TGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGAT 116973 |||| ||||| | ||| || |||| | ||||| ||||| || |||| ||| | || Sbjct 931 TGGTCGACATAGCGCGCAGTGTCGTTGTACACGCGGAGCATGGGGATGAGACCGTTCGAG 872 Query 116974 TGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATAC 117031 ||| || || || ||||| ||||| ||| ||| | || |||| || || Sbjct 871 GTGCCGTTGGTGCCGCGAATGTACGAG--TTGGAGGCGCGGATGCGGTGGCAAGCCAGAC 814 Query 117032 CAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCAT 117091 | || || || ||| |||| ||||| | ||||||| | |||| || | ||||| || | Sbjct 813 CGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCATAGATGCCCT 754 Query 117092 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTAC 117151 |||||||||| |||| | | | ||||||||| ||||| || || | || || | Sbjct 753 CGATCGAGTCCTCCTTCATCGTCAGGAGGAAGCACGACGACAGCTGCGGGCGCGGAGTGC 694 Query 117152 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGG 117211 | |||||||| ||||| || || |||||| |||| | || || | | ||||||| Sbjct 693 CGGCGTTGAACAGGGTCGGGGTGGCGTGGGTGAAGAGCTGCTGCGAGAGCAGGTCGTAGG 634 Query 117212 TCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271 |||| | || | ||| |||| ||| ||| | ||||| | ||| ||||| | ||||| Sbjct 633 TCTCGATCACCGCGGGGATGTTGTCCTTGTGCAGGCCGATGGCGACGCGCATGAGCATGT 574 Query 117272 ATTGGGGT 117279 |||||| Sbjct 573 GCTGGGGT 566 >seq25559 Length=72922 Score = 104 bits (114), Expect = 3e-17 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || |||||| |||||||| ||| ||| | ||| || |||| ||| || Sbjct 47729 GCAAAGTCGCAGTGGAGGCCCTCGTCGCGGCTGATCATTTCGTTACTGAAGGCCAGGCCG 47670 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||||||| || |||||||| | |||||| || | || || ||| ||||||||||| Sbjct 47669 GGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCCGAGAAGAAGATG 47610 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 ||||| || |||||| | | |||||||||||||||| Sbjct 47609 CCCTCGACGGCAGCGAACCCGACGAGACGCTCGGCAAAGG 47570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613306368418080