Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq25087 89.7 7e-13 seq19206 89.7 7e-13 seq19205 89.7 7e-13 >seq25087 Length=6214 Score = 89.7 bits (98), Expect = 7e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 140010 CCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCC 140069 ||||| ||||||| || ||||||||||| ||| ||||||| ||| || || | |||| Sbjct 5408 CCGATTCTGTTGCCCACTCCGCGCGAGCCGCTGTGAAGCATCAGCCACACACGATCGTCC 5467 Query 140070 TCGTCGAGGCAGACCTCGATGAAGTGGTTGCC 140101 ||||| || || | |||||||||||||||||| Sbjct 5468 TCGTCCAGACACATCTCGATGAAGTGGTTGCC 5499 >seq19206 Length=6174 Score = 89.7 bits (98), Expect = 7e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 140010 CCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCC 140069 ||||| ||||||| || ||||||||||| ||| ||||||| ||| || || | |||| Sbjct 4269 CCGATTCTGTTGCCCACTCCGCGCGAGCCGCTGTGAAGCATCAGCCACACACGATCGTCC 4328 Query 140070 TCGTCGAGGCAGACCTCGATGAAGTGGTTGCC 140101 ||||| || || | |||||||||||||||||| Sbjct 4329 TCGTCCAGACACATCTCGATGAAGTGGTTGCC 4360 >seq19205 Length=6178 Score = 89.7 bits (98), Expect = 7e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 140010 CCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCC 140069 ||||| ||||||| || ||||||||||| ||| ||||||| ||| || || | |||| Sbjct 4269 CCGATTCTGTTGCCCACTCCGCGCGAGCCGCTGTGAAGCATCAGCCACACACGATCGTCC 4328 Query 140070 TCGTCGAGGCAGACCTCGATGAAGTGGTTGCC 140101 ||||| || || | |||||||||||||||||| Sbjct 4329 TCGTCCAGACACATCTCGATGAAGTGGTTGCC 4360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715541690726400