Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq25559 228 2e-54 seq20556 159 6e-34 seq20316 159 6e-34 seq18771 159 6e-34 seq18770 159 6e-34 >seq25559 Length=72922 Score = 228 bits (252), Expect = 2e-54 Identities = 452/657 (69%), Gaps = 24/657 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | || |||||||||||| ||| | || ||| Sbjct 47176 ATCTGGGAGATGTACAAGAAGGCCGAGGCTTCGTTCTGGACCGCCGAGGAGGTCGACCTG 47235 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | ||||||| || |||| | | || ||| |||||| ||| || ||||| || Sbjct 47236 AGCGCGGACATGAACCACTGGGCCTCGCTCAGCAACGACGAGAGGCACTTCATCAAGCAC 47295 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 ||| | || ||||| || ||| || || || || ||||| || || | ||| Sbjct 47296 GTGCTCGCCTTCTTCGCCGCCAGCGACGGCATCGTCGCGGAGAACCTCGCCGGCCGCTTC 47355 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAA 25716 | | ||| |||||| |||||| || |||||||| |||||||| || ||||| Sbjct 47356 ATGAAGGAGGTGCAGGTGCCGGAGGCGCGCTGCTTCTACGGCTTCCAGATCGCGATCGAG 47415 Query 25717 AATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGTCGCC 25773 || | ||||| ||| |||| | ||| || || |||||| | | ||| || | Sbjct 47416 AACATCCACTCGGAGATGTA---CTCGCTCCTCATCGACACGTACGTCAAGGACCCCGTC 47472 Query 25774 GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGG 25833 |||| || | || || | |||||||| | | ||| ||||||||||||| Sbjct 47473 GAGAAGGACCACCTCTTCCGCGCCATCGACACCGTGCCCTCGGTCAAGAGGAAGGCCGAC 47532 Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAG---CGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 ||||||||| ||||||||||| || | || || |||| |||||| || || | Sbjct 47533 TGGGCCATGCGGTGGATCAACAAGGAGGGCGTCGAGACCTTTGCCGAGCGTCTCGTCGGG 47592 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTC-AGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 || ||||| || ||||||||||| ||| | | | | ||| |||||||||||||||| Sbjct 47593 TTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCAGCTTCTGC-TCCATCTTCTGGCTCAA 47651 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || ||||||||| ||| ||| ||||| | |||||| | |||||||| Sbjct 47652 GAAGCGCGGCCTCATGCCCGGCCTGGCCTTCAGTAACGAAATGATCAGCCGCGACGAGGG 47711 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA--CTTGCTCCACAAACCTTCT 26067 |||||| | || ||||| ||||| ||||||| ||| || | || |||| || || Sbjct 47712 CCTCCACTGCGACTTTGCGTGCCTCCTCTACA----CCATGCTCG-TCAACAAGCC--CT 47764 Query 26068 CAAGAGAC-CGTCTA--CAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121 | | ||| | | | ||| |||||| ||||| || |||||||||||||||||| Sbjct 47765 CCACCGACGTGCCCAAGCAG-ATCATCCTCGAGGCCGTCGAGATCGAGAAGGAGTTT 47820 >seq20556 Length=15276 Score = 159 bits (176), Expect = 6e-34 Identities = 307/449 (68%), Gaps = 24/449 (5%) Strand=Plus/Plus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGA 221478 ||||| |||| |||||||||||| |||||| |||||| ||| | ||||| || Sbjct 13518 AGGGCGGCGTAGTAGATGGTCTCGAAGATCGCGCGGTTGAG-CTCGCGAGCCTCAGGGCT 13576 Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 | || |||||| ||| |||||||||||||| ||||| |||||||| ||||| Sbjct 13577 CTCCCACGGGTGACGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCGATGCCGAT 13636 Query 221539 GGGCCTGTGTCTCCTGTTGGA--AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||||||||| | | |||| || |||| || || ||| || || |||||| |||| Sbjct 13637 GGGCCTGTGGCGCATGTTCGAGTTGCGG--GCCTCGATCACCGGGTAGTAGTTGATGTCG 13694 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 |||| |||||||||||| ||||| ||| || || || ||| |||||||| ||| | Sbjct 13695 ATCACCTTGTTGAGGTTCTTAGTGACGACCTTGACAACGTCGTGCAGCTTCTTGTGGT-- 13752 Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716 | |||| |||| | ||| | || | ||||| | |||| Sbjct 13753 ----CAAACTTGCCG--TTGGTG----------ATGAACTTGGGCAGGGCGAGCGAGGCC 13796 Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776 | ||| ||||||||||||||||| || ||||| | | ||| || || ||||| Sbjct 13797 AAGTTGCACACGGCCACCTCGTCGGGCGACGTGTACTGCACAACCTCAGTGCACAGGTTC 13856 Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAG 221836 ||| |||||| || ||||| | || || ||||||| ||| ||||||||||| Sbjct 13857 GACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTAC 13916 Query 221837 AGCATAAAGGGACCGCCAGTCTCCAGCTG 221865 ||||| |||| ||| ||||| | ||| Sbjct 13917 AGCATGTAGGGCGTGCCGGTCTCGATCTG 13945 Score = 114 bits (126), Expect = 2e-20 Identities = 289/431 (67%), Gaps = 14/431 (3%) Strand=Plus/Plus Query 222216 CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGT 222275 ||||| | | ||| || | || | || ||||| || ||||||||||| ||||| Sbjct 14368 CGTTGTACACGCGGAGCATGGGGATGAGACCGTTCGAGGTGCCGTTGGTGCCGCGAATGT 14427 Query 222276 ACGCACCGCCGGCCCTCAGGTTAC--TGGCA-GACATGCCGATACCACCGGCGTGTTTCG 222332 ||| | ||| | || | | ||||| | || ||||| || ||||| || | Sbjct 14428 ACGAGTTGGAGGCGC---GGATGCGGTGGCAAGCCAGACCGATGCCGCCGGCCGACTTGG 14484 Query 222333 AGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGT 222392 |||| | |||||| |||||| ||||| ||||||||| || ||||||||||| | Sbjct 14485 AGATGAGGGCGCACTGCTTGAGGGTGTCATAGATGCCCTCGATCGAGTCCTCCTTCATCG 14544 Query 222393 TCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGAC 222452 |||| || || || ||||||| ||| | | | | |||||| ||||| || || Sbjct 14545 TCAGGAGGAAGCACGACGACAGCTGCGGGCGCGGAGTGCCGGCGTTGAACAGGGTCGGGG 14604 Query 222453 TGGCGTGTGTAAAGTAGCCCCT-AGACATCAGATCGTACGTCTCTACGACTCTGGCGATG 222511 ||||||| || ||| ||| || || | ||| ||||| ||||| | || || |||| Sbjct 14605 TGGCGTGGGTGAAG-AGCTGCTGCGAGAGCAGGTCGTAGGTCTCGATCACCGCGGGGATG 14663 Query 222512 TTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGA 222571 |||||| ||| | |||||| | |||| ||||| |||||| | ||| || | Sbjct 14664 TTGTCCTTGTGCAGGCCGATGGCGACGCGCATGAGCATGTGCTGGGGTCGCTCGAC-GAT 14722 Query 222572 C---CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTG 222628 | || | || || || |||||| || || || |||||||| ||||||||| || Sbjct 14723 CTTGCCGTCGACCT--TGAACAGGTAGGAGCGCTCGAGCGTCTTGAAACCAAAGTAGGTG 14780 Query 222629 AGGTCAAAGTC 222639 || ||||| Sbjct 14781 TAGTTGAAGTC 14791 >seq20316 Length=17165 Score = 159 bits (176), Expect = 6e-34 Identities = 307/449 (68%), Gaps = 24/449 (5%) Strand=Plus/Minus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGA 221478 ||||| |||| |||||||||||| |||||| |||||| ||| | ||||| || Sbjct 6350 AGGGCGGCGTAGTAGATGGTCTCGAAGATCGCGCGGTTGAG-CTCGCGAGCCTCAGGGCT 6292 Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 | || |||||| ||| |||||||||||||| ||||| |||||||| ||||| Sbjct 6291 CTCCCACGGGTGACGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCGATGCCGAT 6232 Query 221539 GGGCCTGTGTCTCCTGTTGGAA--GCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||||||||| | | |||| || |||| || || ||| || || |||||| |||| Sbjct 6231 GGGCCTGTGGCGCATGTTCGAGTTGCGG--GCCTCGATCACCGGGTAGTAGTTGATGTCG 6174 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 |||| |||||||||||| ||||| ||| || || || ||| |||||||| ||| | Sbjct 6173 ATCACCTTGTTGAGGTTCTTAGTGACGACCTTGACAACGTCGTGCAGCTTCTTGTGGT-- 6116 Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716 | |||| |||| | ||| | || | ||||| | |||| Sbjct 6115 ----CAAACTTGCCG--TTGGTG----------ATGAACTTGGGCAGGGCGAGCGAGGCC 6072 Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776 | ||| ||||||||||||||||| || ||||| | | ||| || || ||||| Sbjct 6071 AAGTTGCACACGGCCACCTCGTCGGGCGACGTGTACTGCACAACCTCAGTGCACAGGTTC 6012 Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAG 221836 ||| |||||| || ||||| | || || ||||||| ||| ||||||||||| Sbjct 6011 GACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTAC 5952 Query 221837 AGCATAAAGGGACCGCCAGTCTCCAGCTG 221865 ||||| |||| ||| ||||| | ||| Sbjct 5951 AGCATGTAGGGCGTGCCGGTCTCGATCTG 5923 Score = 114 bits (126), Expect = 2e-20 Identities = 289/431 (67%), Gaps = 14/431 (3%) Strand=Plus/Minus Query 222216 CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGT 222275 ||||| | | ||| || | || | || ||||| || ||||||||||| ||||| Sbjct 5500 CGTTGTACACGCGGAGCATGGGGATGAGACCGTTCGAGGTGCCGTTGGTGCCGCGAATGT 5441 Query 222276 ACGCACCGCCGGCCCTCAGGTTAC--TGGCA-GACATGCCGATACCACCGGCGTGTTTCG 222332 ||| | ||| | || | | ||||| | || ||||| || ||||| || | Sbjct 5440 ACGAGTTGGAGGCGC---GGATGCGGTGGCAAGCCAGACCGATGCCGCCGGCCGACTTGG 5384 Query 222333 AGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGT 222392 |||| | |||||| |||||| ||||| ||||||||| || ||||||||||| | Sbjct 5383 AGATGAGGGCGCACTGCTTGAGGGTGTCATAGATGCCCTCGATCGAGTCCTCCTTCATCG 5324 Query 222393 TCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGAC 222452 |||| || || || ||||||| ||| | | | | |||||| ||||| || || Sbjct 5323 TCAGGAGGAAGCACGACGACAGCTGCGGGCGCGGAGTGCCGGCGTTGAACAGGGTCGGGG 5264 Query 222453 TGGCGTGTGTAAAGTAGCCCCT-AGACATCAGATCGTACGTCTCTACGACTCTGGCGATG 222511 ||||||| || ||| ||| || || | ||| ||||| ||||| | || || |||| Sbjct 5263 TGGCGTGGGTGAAG-AGCTGCTGCGAGAGCAGGTCGTAGGTCTCGATCACCGCGGGGATG 5205 Query 222512 TTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGA 222571 |||||| ||| | |||||| | |||| ||||| |||||| | ||| || | Sbjct 5204 TTGTCCTTGTGCAGGCCGATGGCGACGCGCATGAGCATGTGCTGGGGTCGCTCGAC-GAT 5146 Query 222572 C---CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTG 222628 | || | || || || |||||| || || || |||||||| ||||||||| || Sbjct 5145 CTTGCCGTCGACCT--TGAACAGGTAGGAGCGCTCGAGCGTCTTGAAACCAAAGTAGGTG 5088 Query 222629 AGGTCAAAGTC 222639 || ||||| Sbjct 5087 TAGTTGAAGTC 5077 >seq18771 Length=17162 Score = 159 bits (176), Expect = 6e-34 Identities = 307/449 (68%), Gaps = 24/449 (5%) Strand=Plus/Plus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGA 221478 ||||| |||| |||||||||||| |||||| |||||| ||| | ||||| || Sbjct 10816 AGGGCGGCGTAGTAGATGGTCTCGAAGATCGCGCGGTTGAG-CTCGCGAGCCTCAGGGCT 10874 Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 | || |||||| ||| |||||||||||||| ||||| |||||||| ||||| Sbjct 10875 CTCCCACGGGTGACGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCGATGCCGAT 10934 Query 221539 GGGCCTGTGTCTCCTGTTGGA--AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||||||||| | | |||| || |||| || || ||| || || |||||| |||| Sbjct 10935 GGGCCTGTGGCGCATGTTCGAGTTGCGG--GCCTCGATCACCGGGTAGTAGTTGATGTCG 10992 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 |||| |||||||||||| ||||| ||| || || || ||| |||||||| ||| | Sbjct 10993 ATCACCTTGTTGAGGTTCTTAGTGACGACCTTGACAACGTCGTGCAGCTTCTTGTGGT-- 11050 Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716 | |||| |||| | ||| | || | ||||| | |||| Sbjct 11051 ----CAAACTTGCCG--TTGGTG----------ATGAACTTGGGCAGGGCGAGCGAGGCC 11094 Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776 | ||| ||||||||||||||||| || ||||| | | ||| || || ||||| Sbjct 11095 AAGTTGCACACGGCCACCTCGTCGGGCGACGTGTACTGCACAACCTCAGTGCACAGGTTC 11154 Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAG 221836 ||| |||||| || ||||| | || || ||||||| ||| ||||||||||| Sbjct 11155 GACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTAC 11214 Query 221837 AGCATAAAGGGACCGCCAGTCTCCAGCTG 221865 ||||| |||| ||| ||||| | ||| Sbjct 11215 AGCATGTAGGGCGTGCCGGTCTCGATCTG 11243 Score = 114 bits (126), Expect = 2e-20 Identities = 289/431 (67%), Gaps = 14/431 (3%) Strand=Plus/Plus Query 222216 CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGT 222275 ||||| | | ||| || | || | || ||||| || ||||||||||| ||||| Sbjct 11666 CGTTGTACACGCGGAGCATGGGGATGAGACCGTTCGAGGTGCCGTTGGTGCCGCGAATGT 11725 Query 222276 ACGCACCGCCGGCCCTCAGGTTAC--TGGCA-GACATGCCGATACCACCGGCGTGTTTCG 222332 ||| | ||| | || | | ||||| | || ||||| || ||||| || | Sbjct 11726 ACGAGTTGGAGGCGC---GGATGCGGTGGCAAGCCAGACCGATGCCGCCGGCCGACTTGG 11782 Query 222333 AGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGT 222392 |||| | |||||| |||||| ||||| ||||||||| || ||||||||||| | Sbjct 11783 AGATGAGGGCGCACTGCTTGAGGGTGTCATAGATGCCCTCGATCGAGTCCTCCTTCATCG 11842 Query 222393 TCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGAC 222452 |||| || || || ||||||| ||| | | | | |||||| ||||| || || Sbjct 11843 TCAGGAGGAAGCACGACGACAGCTGCGGGCGCGGAGTGCCGGCGTTGAACAGGGTCGGGG 11902 Query 222453 TGGCGTGTGTAAAGTAGCCCCT-AGACATCAGATCGTACGTCTCTACGACTCTGGCGATG 222511 ||||||| || ||| ||| || || | ||| ||||| ||||| | || || |||| Sbjct 11903 TGGCGTGGGTGAAG-AGCTGCTGCGAGAGCAGGTCGTAGGTCTCGATCACCGCGGGGATG 11961 Query 222512 TTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGA 222571 |||||| ||| | |||||| | |||| ||||| |||||| | ||| || | Sbjct 11962 TTGTCCTTGTGCAGGCCGATGGCGACGCGCATGAGCATGTGCTGGGGTCGCTCGAC-GAT 12020 Query 222572 C---CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTG 222628 | || | || || || |||||| || || || |||||||| ||||||||| || Sbjct 12021 CTTGCCGTCGACCT--TGAACAGGTAGGAGCGCTCGAGCGTCTTGAAACCAAAGTAGGTG 12078 Query 222629 AGGTCAAAGTC 222639 || ||||| Sbjct 12079 TAGTTGAAGTC 12089 >seq18770 Length=15255 Score = 159 bits (176), Expect = 6e-34 Identities = 307/449 (68%), Gaps = 24/449 (5%) Strand=Plus/Minus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGA 221478 ||||| |||| |||||||||||| |||||| |||||| ||| | ||||| || Sbjct 1759 AGGGCGGCGTAGTAGATGGTCTCGAAGATCGCGCGGTTGAG-CTCGCGAGCCTCAGGGCT 1701 Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 | || |||||| ||| |||||||||||||| ||||| |||||||| ||||| Sbjct 1700 CTCCCACGGGTGACGCAGGATCATGAAGACGTCGGCCAGACCCTGCACTCCGATGCCGAT 1641 Query 221539 GGGCCTGTGTCTCCTGTTGGAA--GCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||||||||| | | |||| || |||| || || ||| || || |||||| |||| Sbjct 1640 GGGCCTGTGGCGCATGTTCGAGTTGCGG--GCCTCGATCACCGGGTAGTAGTTGATGTCG 1583 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 |||| |||||||||||| ||||| ||| || || || ||| |||||||| ||| | Sbjct 1582 ATCACCTTGTTGAGGTTCTTAGTGACGACCTTGACAACGTCGTGCAGCTTCTTGTGGT-- 1525 Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716 | |||| |||| | ||| | || | ||||| | |||| Sbjct 1524 ----CAAACTTGCCG--TTGGTG----------ATGAACTTGGGCAGGGCGAGCGAGGCC 1481 Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776 | ||| ||||||||||||||||| || ||||| | | ||| || || ||||| Sbjct 1480 AAGTTGCACACGGCCACCTCGTCGGGCGACGTGTACTGCACAACCTCAGTGCACAGGTTC 1421 Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAG 221836 ||| |||||| || ||||| | || || ||||||| ||| ||||||||||| Sbjct 1420 GACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTAC 1361 Query 221837 AGCATAAAGGGACCGCCAGTCTCCAGCTG 221865 ||||| |||| ||| ||||| | ||| Sbjct 1360 AGCATGTAGGGCGTGCCGGTCTCGATCTG 1332 Score = 114 bits (126), Expect = 2e-20 Identities = 289/431 (67%), Gaps = 14/431 (3%) Strand=Plus/Minus Query 222216 CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGT 222275 ||||| | | ||| || | || | || ||||| || ||||||||||| ||||| Sbjct 909 CGTTGTACACGCGGAGCATGGGGATGAGACCGTTCGAGGTGCCGTTGGTGCCGCGAATGT 850 Query 222276 ACGCACCGCCGGCCCTCAGGTTAC--TGGCA-GACATGCCGATACCACCGGCGTGTTTCG 222332 ||| | ||| | || | | ||||| | || ||||| || ||||| || | Sbjct 849 ACGAGTTGGAGGCGC---GGATGCGGTGGCAAGCCAGACCGATGCCGCCGGCCGACTTGG 793 Query 222333 AGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGT 222392 |||| | |||||| |||||| ||||| ||||||||| || ||||||||||| | Sbjct 792 AGATGAGGGCGCACTGCTTGAGGGTGTCATAGATGCCCTCGATCGAGTCCTCCTTCATCG 733 Query 222393 TCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGAC 222452 |||| || || || ||||||| ||| | | | | |||||| ||||| || || Sbjct 732 TCAGGAGGAAGCACGACGACAGCTGCGGGCGCGGAGTGCCGGCGTTGAACAGGGTCGGGG 673 Query 222453 TGGCGTGTGTAAAGTAGCCCCT-AGACATCAGATCGTACGTCTCTACGACTCTGGCGATG 222511 ||||||| || ||| ||| || || | ||| ||||| ||||| | || || |||| Sbjct 672 TGGCGTGGGTGAAG-AGCTGCTGCGAGAGCAGGTCGTAGGTCTCGATCACCGCGGGGATG 614 Query 222512 TTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGA 222571 |||||| ||| | |||||| | |||| ||||| |||||| | ||| || | Sbjct 613 TTGTCCTTGTGCAGGCCGATGGCGACGCGCATGAGCATGTGCTGGGGTCGCTCGAC-GAT 555 Query 222572 C---CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTG 222628 | || | || || || |||||| || || || |||||||| ||||||||| || Sbjct 554 CTTGCCGTCGACCT--TGAACAGGTAGGAGCGCTCGAGCGTCTTGAAACCAAAGTAGGTG 497 Query 222629 AGGTCAAAGTC 222639 || ||||| Sbjct 496 TAGTTGAAGTC 486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928540742654720