Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq22801 82.4 7e-11 seq20208 82.4 7e-11 seq20207 82.4 7e-11 >seq22801 Length=3814 Score = 82.4 bits (90), Expect = 7e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 43869 CGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGTCC 43928 |||||||||||||||||||| |||||||||||||||||||| || | ||||||| | Sbjct 3272 CGCTGGAAGGTGCCGTCGAGCGCGGCCACGATGACGATCTTGCCGAGGCTCGCCATCAGC 3331 Query 43929 TCGCAGAA 43936 |||||||| Sbjct 3332 TCGCAGAA 3339 >seq20208 Length=9192 Score = 82.4 bits (90), Expect = 7e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 43869 CGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGTCC 43928 |||||||||||||||||||| |||||||||||||||||||| || | ||||||| | Sbjct 1145 CGCTGGAAGGTGCCGTCGAGCGCGGCCACGATGACGATCTTGCCGAGGCTCGCCATCAGC 1204 Query 43929 TCGCAGAA 43936 |||||||| Sbjct 1205 TCGCAGAA 1212 >seq20207 Length=2199 Score = 82.4 bits (90), Expect = 7e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 43869 CGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGTCC 43928 |||||||||||||||||||| |||||||||||||||||||| || | ||||||| | Sbjct 1145 CGCTGGAAGGTGCCGTCGAGCGCGGCCACGATGACGATCTTGCCGAGGCTCGCCATCAGC 1204 Query 43929 TCGCAGAA 43936 |||||||| Sbjct 1205 TCGCAGAA 1212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475885767782240