Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq25087 93.3 1e-14 seq19206 93.3 1e-14 seq19205 93.3 1e-14 >seq25087 Length=6214 Score = 93.3 bits (102), Expect = 1e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 37376 TCGAGTGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCG-GCTTACAAGGACATC 37434 |||||||||| | || ||||| || | ||||| ||||| ||| || |||||||||||| Sbjct 4624 TCGAGTGCCGACACGACGCCGACCTGCTTGACGAAACGCC-GCGCGCCTACAAGGACATC 4566 Query 37435 GATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTC 37494 || || |||||| || || || | ||| || || ||||||||||||| || ||| Sbjct 4565 GACGCCGTCATGCTGGCCCAGTCGGACCTCGTCGAGGTCGTGCACACGCTCAAGCAGGTC 4506 Query 37495 GTTTGCGTGAAGGGTTGA 37512 | ||||| ||||||||| Sbjct 4505 CTGTGCGTCAAGGGTTGA 4488 >seq19206 Length=6174 Score = 93.3 bits (102), Expect = 1e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 37376 TCGAGTGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCG-GCTTACAAGGACATC 37434 |||||||||| | || ||||| || | ||||| ||||| ||| || |||||||||||| Sbjct 3485 TCGAGTGCCGACACGACGCCGACCTGCTTGACGAAACGCC-GCGCGCCTACAAGGACATC 3427 Query 37435 GATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTC 37494 || || |||||| || || || | ||| || || ||||||||||||| || ||| Sbjct 3426 GACGCCGTCATGCTGGCCCAGTCGGACCTCGTCGAGGTCGTGCACACGCTCAAGCAGGTC 3367 Query 37495 GTTTGCGTGAAGGGTTGA 37512 | ||||| ||||||||| Sbjct 3366 CTGTGCGTCAAGGGTTGA 3349 >seq19205 Length=6178 Score = 93.3 bits (102), Expect = 1e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 37376 TCGAGTGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCG-GCTTACAAGGACATC 37434 |||||||||| | || ||||| || | ||||| ||||| ||| || |||||||||||| Sbjct 3485 TCGAGTGCCGACACGACGCCGACCTGCTTGACGAAACGCC-GCGCGCCTACAAGGACATC 3427 Query 37435 GATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTC 37494 || || |||||| || || || | ||| || || ||||||||||||| || ||| Sbjct 3426 GACGCCGTCATGCTGGCCCAGTCGGACCTCGTCGAGGTCGTGCACACGCTCAAGCAGGTC 3367 Query 37495 GTTTGCGTGAAGGGTTGA 37512 | ||||| ||||||||| Sbjct 3366 CTGTGCGTCAAGGGTTGA 3349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139239885362256