Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq20556 174 2e-38 seq20316 174 2e-38 seq18771 174 2e-38 seq18770 174 2e-38 seq25559 152 6e-32 seq25649 96.9 4e-15 >seq20556 Length=15276 Score = 174 bits (192), Expect = 2e-38 Identities = 555/843 (66%), Gaps = 32/843 (4%) Strand=Plus/Minus Query 55106 AAGCTTCACGAAGT-GACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAA 55164 ||||| ||||| || | | | || || ||| |||||| ||| ||| ||||||| || Sbjct 13744 AAGCTGCACGACGTTGTCAAG-GTCGTCACTAAGAACCTCAACAAGGTGATCGACATCAA 13686 Query 55165 TTACTACCCGACTGAA-GCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCG 55223 ||||||||| ||| | ||| ||||| || ||| | || ||| ||||||||| ||||| Sbjct 13685 CTACTACCCGG-TGATCGAGGCCCGCAACTCGAACATGCGCCACAGGCCCATCGGCATCG 13627 Query 55224 GTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTCGGAACCTG 55283 | || ||||| |||||||| |||||||||| || | || | || | |||| Sbjct 13626 GAGTGCAGGGTCTGGCCGACGTCTTCATGATCCTGCGTCACCCGTGGGA---GAGCCCTG 13570 Query 55284 ---CTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGAG 55339 |||| || | |||| | |||||| || | |||||||| || || |||| | Sbjct 13569 AGGCTCGCGAGCTCAACCGCGCGATCTTCGAGAC-CATCTACTACGCCGCCCTCGTTGCC 13511 Query 55340 TCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCTGAC 55399 ||| | ||||| | |||||| |||||| |||| | | | |||||| || Sbjct 13510 TCGAACGAGTTGGCTCAGGTCGAGGGCACCTACCAGACCTACGAGGGTTCGCCCGCCTCG 13451 Query 55400 AAGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCTGACCC-----CATGTTTGACAAGT 55454 |||| |||||| ||| || ||| | ||| ||| ||||| ||| | Sbjct 13450 CAGGGCAGGCTCCAGCCCGACCTCTGGAAC--GTCACTCCCTCGGACATGTGGGACTGGG 13393 Query 55455 TGAAGCATG------ACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGGCGCCAA 55508 | | |||| | | || || | ||||| || ||||||||||| | Sbjct 13392 CCACCCTCCGCGCCAACATCGCCGAGCACGGTCTCAGGAACTCGCTCCTCGTGGCGCCCA 13333 Query 55509 TGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGTACACGA 55568 |||| || || ||||| | |||||| | |||||||||||| |||||||| ||||| Sbjct 13332 TGCCCACGGCTTCGACCTCGCAGATCCTCGGCAACAACGAGTGCTTCGAGCCCTACACCT 13273 Query 55569 CCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAGCACCTCG 55628 ||||||||||| ||||| | ||| || || || || | | ||||| | || || Sbjct 13272 CCAACATCTACACCCGCCGCATCCTCGCCGGCGACTTCACCGTCGTCAACGACCATCTGC 13213 Query 55629 TCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGATCAAGACGGATATTGTGCGGA 55688 | || || | || | | |||| || |||||| | | || | Sbjct 13212 TGCGTGAGCTCAACGAGCGCGGCCTCTGGACGCCTGCCCTCAAGAACAAGCTCGTTTCGC 13153 Query 55689 ACGGGGGGTCCGTCCAGA--ATCT-GGAGATTCCTCTGCGTC-TCAAGGAGATTTACCGG 55744 || || || |||||| ||| |||||| || | || | ||||| | | ||| | Sbjct 13152 ACAACGGCTCTGTCCAGCGCATCGAGGAGATCCC-CGACGACATCAAGAGGCTGTACAAG 13094 Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTC-TGATTGACATGAGTGCTGATCGTGGTGCGTA 55803 || |||||||||||||| ||| | ||| | || |||||| || ||||| || || Sbjct 13093 ACCGTGTGGGAGATTCCCCAGC-GCGTCATCATCGACATGGCCGCCGATCGCTCGGCCTA 13035 Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863 ||| |||||| |||||| || ||| ||| ||||| | || || | |||||| | | Sbjct 13034 CATTGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCCTCGTTTGCCAAGCTCAC 12975 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 |||||||||||| || | ||| ||||| |||||||| || |||||||| || || || Sbjct 12974 CTCGATGCACTTCTATGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTACCTCCGCAC 12915 Query 55924 CCG 55926 ||| Sbjct 12914 CCG 12912 Score = 145 bits (160), Expect = 8e-30 Identities = 176/237 (74%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 |||||||||||||| | || | ||| ||| || | | |||| || ||||| ||| Sbjct 14697 TCATGCGCGTCGCCATCGGCCTGCACAAGGACAACATCCCCGCG-GTGATCGAGACCTAC 14639 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 ||| | | || || ||| || |||||||| || |||||||||||||| || || Sbjct 14638 GACCTGCTCTCGCAGCAGCTCTTCACCCACGCCACCCCGACCCTGTTCAACGCCGGCACT 14579 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | ||| ||| ||||| |||||||| || |||||||||| ||||||||||| ||| Sbjct 14578 CCGCGCCCGCAGCTGTCGTCGTGCTTCCTCCTGACGATGAAGGAGGACTCGATCGAGGGC 14519 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428 ||||| || || |||||| |||| |||| ||||||||||| | | || || |||||| Sbjct 14518 ATCTATGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGGCGGCATCGGT 14462 Score = 105 bits (116), Expect = 7e-18 Identities = 279/417 (67%), Gaps = 12/417 (3%) Strand=Plus/Minus Query 53546 GGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATT 53605 || || || ||||||||||| | || ||||||||||||||||| |||||||| ||||| Sbjct 14269 GGAGGCGGCAAGCGCAAGGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCGGACATC 14210 Query 53606 ATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTG 53665 | || || ||| | || ||| || || | || |||| ||| ||| || || Sbjct 14209 TTTGACTTCCTCAACCTCAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTC 14150 Query 53666 TT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTG 53724 || ||| || || ||||| || || ||||||||| | |||||| | | || || Sbjct 14149 TTCTACGGC-CTCTGGATCCCCGATCTCTTCATGAAGCGCGTGGAGTCTGGTGGCGACTG 14091 Query 53725 GTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTC---TACGGTGAGGAGTT 53781 || || | ||||| |||||| ||| || || | || | | ||| ||| || Sbjct 14090 GTCGCTCTTCTGCCCCAACGAGGCCCCTGGTCT---GTTTGACTCGTGGGGTAAGGTCTT 14034 Query 53782 TAACGAGATGTATCGGACG-TACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 | |||| ||| || || |||| || | |||||||| | ||||||||| Sbjct 14033 CGAGGAGAAGTA-CGAGCGCTACG-AGAGCGAGGGCCGCGCCCGCCGCGTGGTCAAGGCC 13976 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | ||| | ||| || |||||| || ||| | ||||| || ||||| |||||| Sbjct 13975 CAGGAGCTGTGGTTCGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTG 13916 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCG 53956 |||||||| | ||||| ||| ||||||| || || ||||| |||| | ||| Sbjct 13915 TACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCG 13859 >seq20316 Length=17165 Score = 174 bits (192), Expect = 2e-38 Identities = 555/843 (66%), Gaps = 32/843 (4%) Strand=Plus/Plus Query 55106 AAGCTTCACGAAGT-GACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAA 55164 ||||| ||||| || | | | || || ||| |||||| ||| ||| ||||||| || Sbjct 6124 AAGCTGCACGACGTTGTCAAG-GTCGTCACTAAGAACCTCAACAAGGTGATCGACATCAA 6182 Query 55165 TTACTACCCGACTGAA-GCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCG 55223 ||||||||| ||| | ||| ||||| || ||| | || ||| ||||||||| ||||| Sbjct 6183 CTACTACCCGG-TGATCGAGGCCCGCAACTCGAACATGCGCCACAGGCCCATCGGCATCG 6241 Query 55224 GTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTCGGAACCTG 55283 | || ||||| |||||||| |||||||||| || | || | || | |||| Sbjct 6242 GAGTGCAGGGTCTGGCCGACGTCTTCATGATCCTGCGTCACCCGTGGGA---GAGCCCTG 6298 Query 55284 ---CTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGAG 55339 |||| || | |||| | |||||| || | |||||||| || || |||| | Sbjct 6299 AGGCTCGCGAGCTCAACCGCGCGATCTTCGAGAC-CATCTACTACGCCGCCCTCGTTGCC 6357 Query 55340 TCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCTGAC 55399 ||| | ||||| | |||||| |||||| |||| | | | |||||| || Sbjct 6358 TCGAACGAGTTGGCTCAGGTCGAGGGCACCTACCAGACCTACGAGGGTTCGCCCGCCTCG 6417 Query 55400 AAGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCTGACCC-----CATGTTTGACAAGT 55454 |||| |||||| ||| || ||| | ||| ||| ||||| ||| | Sbjct 6418 CAGGGCAGGCTCCAGCCCGACCTCTGGAAC--GTCACTCCCTCGGACATGTGGGACTGGG 6475 Query 55455 TGAAGCATG------ACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGGCGCCAA 55508 | | |||| | | || || | ||||| || ||||||||||| | Sbjct 6476 CCACCCTCCGCGCCAACATCGCCGAGCACGGTCTCAGGAACTCGCTCCTCGTGGCGCCCA 6535 Query 55509 TGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGTACACGA 55568 |||| || || ||||| | |||||| | |||||||||||| |||||||| ||||| Sbjct 6536 TGCCCACGGCTTCGACCTCGCAGATCCTCGGCAACAACGAGTGCTTCGAGCCCTACACCT 6595 Query 55569 CCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAGCACCTCG 55628 ||||||||||| ||||| | ||| || || || || | | ||||| | || || Sbjct 6596 CCAACATCTACACCCGCCGCATCCTCGCCGGCGACTTCACCGTCGTCAACGACCATCTGC 6655 Query 55629 TCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGATCAAGACGGATATTGTGCGGA 55688 | || || | || | | |||| || |||||| | | || | Sbjct 6656 TGCGTGAGCTCAACGAGCGCGGCCTCTGGACGCCTGCCCTCAAGAACAAGCTCGTTTCGC 6715 Query 55689 ACGGGGGGTCCGTCCAGA--ATCT-GGAGATTCCTCTGCGTC-TCAAGGAGATTTACCGG 55744 || || || |||||| ||| |||||| || | || | ||||| | | ||| | Sbjct 6716 ACAACGGCTCTGTCCAGCGCATCGAGGAGATCCC-CGACGACATCAAGAGGCTGTACAAG 6774 Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTC-TGATTGACATGAGTGCTGATCGTGGTGCGTA 55803 || |||||||||||||| ||| | ||| | || |||||| || ||||| || || Sbjct 6775 ACCGTGTGGGAGATTCCCCAG-CGCGTCATCATCGACATGGCCGCCGATCGCTCGGCCTA 6833 Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863 ||| |||||| |||||| || ||| ||| ||||| | || || | |||||| | | Sbjct 6834 CATTGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCCTCGTTTGCCAAGCTCAC 6893 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 |||||||||||| || | ||| ||||| |||||||| || |||||||| || || || Sbjct 6894 CTCGATGCACTTCTATGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTACCTCCGCAC 6953 Query 55924 CCG 55926 ||| Sbjct 6954 CCG 6956 Score = 145 bits (160), Expect = 8e-30 Identities = 176/237 (74%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 |||||||||||||| | || | ||| ||| || | | |||| || ||||| ||| Sbjct 5171 TCATGCGCGTCGCCATCGGCCTGCACAAGGACAACATCCCCGCG-GTGATCGAGACCTAC 5229 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 ||| | | || || ||| || |||||||| || |||||||||||||| || || Sbjct 5230 GACCTGCTCTCGCAGCAGCTCTTCACCCACGCCACCCCGACCCTGTTCAACGCCGGCACT 5289 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | ||| ||| ||||| |||||||| || |||||||||| ||||||||||| ||| Sbjct 5290 CCGCGCCCGCAGCTGTCGTCGTGCTTCCTCCTGACGATGAAGGAGGACTCGATCGAGGGC 5349 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428 ||||| || || |||||| |||| |||| ||||||||||| | | || || |||||| Sbjct 5350 ATCTATGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGGCGGCATCGGT 5406 Score = 105 bits (116), Expect = 7e-18 Identities = 279/417 (67%), Gaps = 12/417 (3%) Strand=Plus/Plus Query 53546 GGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATT 53605 || || || ||||||||||| | || ||||||||||||||||| |||||||| ||||| Sbjct 5599 GGAGGCGGCAAGCGCAAGGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCGGACATC 5658 Query 53606 ATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTG 53665 | || || ||| | || ||| || || | || |||| ||| ||| || || Sbjct 5659 TTTGACTTCCTCAACCTCAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTC 5718 Query 53666 TT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTG 53724 || ||| || || ||||| || || ||||||||| | |||||| | | || || Sbjct 5719 TTCTACGGC-CTCTGGATCCCCGATCTCTTCATGAAGCGCGTGGAGTCTGGTGGCGACTG 5777 Query 53725 GTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTC---TACGGTGAGGAGTT 53781 || || | ||||| |||||| ||| || || | || | | ||| ||| || Sbjct 5778 GTCGCTCTTCTGCCCCAACGAGGCCCCTGGTCT---GTTTGACTCGTGGGGTAAGGTCTT 5834 Query 53782 TAACGAGATGTATCGGACG-TACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 | |||| ||| || || |||| || | |||||||| | ||||||||| Sbjct 5835 CGAGGAGAAGTA-CGAGCGCTACG-AGAGCGAGGGCCGCGCCCGCCGCGTGGTCAAGGCC 5892 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | ||| | ||| || |||||| || ||| | ||||| || ||||| |||||| Sbjct 5893 CAGGAGCTGTGGTTCGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTG 5952 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCG 53956 |||||||| | ||||| ||| ||||||| || || ||||| |||| | ||| Sbjct 5953 TACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCG 6009 >seq18771 Length=17162 Score = 174 bits (192), Expect = 2e-38 Identities = 555/843 (66%), Gaps = 32/843 (4%) Strand=Plus/Minus Query 55106 AAGCTTCACGAAGT-GACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAA 55164 ||||| ||||| || | | | || || ||| |||||| ||| ||| ||||||| || Sbjct 11042 AAGCTGCACGACGTTGTCAAG-GTCGTCACTAAGAACCTCAACAAGGTGATCGACATCAA 10984 Query 55165 TTACTACCCGACTGAA-GCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCG 55223 ||||||||| ||| | ||| ||||| || ||| | || ||| ||||||||| ||||| Sbjct 10983 CTACTACCCGG-TGATCGAGGCCCGCAACTCGAACATGCGCCACAGGCCCATCGGCATCG 10925 Query 55224 GTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTCGGAACCTG 55283 | || ||||| |||||||| |||||||||| || | || | || | |||| Sbjct 10924 GAGTGCAGGGTCTGGCCGACGTCTTCATGATCCTGCGTCACCCGTGGGA---GAGCCCTG 10868 Query 55284 ---CTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGAG 55339 |||| || | |||| | |||||| || | |||||||| || || |||| | Sbjct 10867 AGGCTCGCGAGCTCAACCGCGCGATCTTCGAGAC-CATCTACTACGCCGCCCTCGTTGCC 10809 Query 55340 TCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCTGAC 55399 ||| | ||||| | |||||| |||||| |||| | | | |||||| || Sbjct 10808 TCGAACGAGTTGGCTCAGGTCGAGGGCACCTACCAGACCTACGAGGGTTCGCCCGCCTCG 10749 Query 55400 AAGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCTGACCC-----CATGTTTGACAAGT 55454 |||| |||||| ||| || ||| | ||| ||| ||||| ||| | Sbjct 10748 CAGGGCAGGCTCCAGCCCGACCTCTGGAAC--GTCACTCCCTCGGACATGTGGGACTGGG 10691 Query 55455 TGAAGCATG------ACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGGCGCCAA 55508 | | |||| | | || || | ||||| || ||||||||||| | Sbjct 10690 CCACCCTCCGCGCCAACATCGCCGAGCACGGTCTCAGGAACTCGCTCCTCGTGGCGCCCA 10631 Query 55509 TGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGTACACGA 55568 |||| || || ||||| | |||||| | |||||||||||| |||||||| ||||| Sbjct 10630 TGCCCACGGCTTCGACCTCGCAGATCCTCGGCAACAACGAGTGCTTCGAGCCCTACACCT 10571 Query 55569 CCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAGCACCTCG 55628 ||||||||||| ||||| | ||| || || || || | | ||||| | || || Sbjct 10570 CCAACATCTACACCCGCCGCATCCTCGCCGGCGACTTCACCGTCGTCAACGACCATCTGC 10511 Query 55629 TCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGATCAAGACGGATATTGTGCGGA 55688 | || || | || | | |||| || |||||| | | || | Sbjct 10510 TGCGTGAGCTCAACGAGCGCGGCCTCTGGACGCCTGCCCTCAAGAACAAGCTCGTTTCGC 10451 Query 55689 ACGGGGGGTCCGTCCAGA--ATCT-GGAGATTCCTCTGCGTC-TCAAGGAGATTTACCGG 55744 || || || |||||| ||| |||||| || | || | ||||| | | ||| | Sbjct 10450 ACAACGGCTCTGTCCAGCGCATCGAGGAGATCCC-CGACGACATCAAGAGGCTGTACAAG 10392 Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTC-TGATTGACATGAGTGCTGATCGTGGTGCGTA 55803 || |||||||||||||| ||| | ||| | || |||||| || ||||| || || Sbjct 10391 ACCGTGTGGGAGATTCCCCAGC-GCGTCATCATCGACATGGCCGCCGATCGCTCGGCCTA 10333 Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863 ||| |||||| |||||| || ||| ||| ||||| | || || | |||||| | | Sbjct 10332 CATTGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCCTCGTTTGCCAAGCTCAC 10273 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 |||||||||||| || | ||| ||||| |||||||| || |||||||| || || || Sbjct 10272 CTCGATGCACTTCTATGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTACCTCCGCAC 10213 Query 55924 CCG 55926 ||| Sbjct 10212 CCG 10210 Score = 145 bits (160), Expect = 8e-30 Identities = 176/237 (74%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 |||||||||||||| | || | ||| ||| || | | |||| || ||||| ||| Sbjct 11995 TCATGCGCGTCGCCATCGGCCTGCACAAGGACAACATCCCCGCG-GTGATCGAGACCTAC 11937 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 ||| | | || || ||| || |||||||| || |||||||||||||| || || Sbjct 11936 GACCTGCTCTCGCAGCAGCTCTTCACCCACGCCACCCCGACCCTGTTCAACGCCGGCACT 11877 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | ||| ||| ||||| |||||||| || |||||||||| ||||||||||| ||| Sbjct 11876 CCGCGCCCGCAGCTGTCGTCGTGCTTCCTCCTGACGATGAAGGAGGACTCGATCGAGGGC 11817 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428 ||||| || || |||||| |||| |||| ||||||||||| | | || || |||||| Sbjct 11816 ATCTATGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGGCGGCATCGGT 11760 Score = 105 bits (116), Expect = 7e-18 Identities = 279/417 (67%), Gaps = 12/417 (3%) Strand=Plus/Minus Query 53546 GGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATT 53605 || || || ||||||||||| | || ||||||||||||||||| |||||||| ||||| Sbjct 11567 GGAGGCGGCAAGCGCAAGGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCGGACATC 11508 Query 53606 ATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTG 53665 | || || ||| | || ||| || || | || |||| ||| ||| || || Sbjct 11507 TTTGACTTCCTCAACCTCAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTC 11448 Query 53666 TT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTG 53724 || ||| || || ||||| || || ||||||||| | |||||| | | || || Sbjct 11447 TTCTACGGC-CTCTGGATCCCCGATCTCTTCATGAAGCGCGTGGAGTCTGGTGGCGACTG 11389 Query 53725 GTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTC---TACGGTGAGGAGTT 53781 || || | ||||| |||||| ||| || || | || | | ||| ||| || Sbjct 11388 GTCGCTCTTCTGCCCCAACGAGGCCCCTGGTCT---GTTTGACTCGTGGGGTAAGGTCTT 11332 Query 53782 TAACGAGATGTATCGGACG-TACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 | |||| ||| || || |||| || | |||||||| | ||||||||| Sbjct 11331 CGAGGAGAAGTA-CGAGCGCTACG-AGAGCGAGGGCCGCGCCCGCCGCGTGGTCAAGGCC 11274 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | ||| | ||| || |||||| || ||| | ||||| || ||||| |||||| Sbjct 11273 CAGGAGCTGTGGTTCGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTG 11214 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCG 53956 |||||||| | ||||| ||| ||||||| || || ||||| |||| | ||| Sbjct 11213 TACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCG 11157 >seq18770 Length=15255 Score = 174 bits (192), Expect = 2e-38 Identities = 555/843 (66%), Gaps = 32/843 (4%) Strand=Plus/Plus Query 55106 AAGCTTCACGAAGT-GACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAA 55164 ||||| ||||| || | | | || || ||| |||||| ||| ||| ||||||| || Sbjct 1533 AAGCTGCACGACGTTGTCAAG-GTCGTCACTAAGAACCTCAACAAGGTGATCGACATCAA 1591 Query 55165 TTACTACCCGACTGAA-GCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCG 55223 ||||||||| ||| | ||| ||||| || ||| | || ||| ||||||||| ||||| Sbjct 1592 CTACTACCCGG-TGATCGAGGCCCGCAACTCGAACATGCGCCACAGGCCCATCGGCATCG 1650 Query 55224 GTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTCGGAACCTG 55283 | || ||||| |||||||| |||||||||| || | || | || | |||| Sbjct 1651 GAGTGCAGGGTCTGGCCGACGTCTTCATGATCCTGCGTCACCCGTGGGA---GAGCCCTG 1707 Query 55284 ---CTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGAG 55339 |||| || | |||| | |||||| || | |||||||| || || |||| | Sbjct 1708 AGGCTCGCGAGCTCAACCGCGCGATCTTCGAGAC-CATCTACTACGCCGCCCTCGTTGCC 1766 Query 55340 TCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCTGAC 55399 ||| | ||||| | |||||| |||||| |||| | | | |||||| || Sbjct 1767 TCGAACGAGTTGGCTCAGGTCGAGGGCACCTACCAGACCTACGAGGGTTCGCCCGCCTCG 1826 Query 55400 AAGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCTGACCC-----CATGTTTGACAAGT 55454 |||| |||||| ||| || ||| | ||| ||| ||||| ||| | Sbjct 1827 CAGGGCAGGCTCCAGCCCGACCTCTGGAAC--GTCACTCCCTCGGACATGTGGGACTGGG 1884 Query 55455 TGAAGCATG------ACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGGCGCCAA 55508 | | |||| | | || || | ||||| || ||||||||||| | Sbjct 1885 CCACCCTCCGCGCCAACATCGCCGAGCACGGTCTCAGGAACTCGCTCCTCGTGGCGCCCA 1944 Query 55509 TGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGTACACGA 55568 |||| || || ||||| | |||||| | |||||||||||| |||||||| ||||| Sbjct 1945 TGCCCACGGCTTCGACCTCGCAGATCCTCGGCAACAACGAGTGCTTCGAGCCCTACACCT 2004 Query 55569 CCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAGCACCTCG 55628 ||||||||||| ||||| | ||| || || || || | | ||||| | || || Sbjct 2005 CCAACATCTACACCCGCCGCATCCTCGCCGGCGACTTCACCGTCGTCAACGACCATCTGC 2064 Query 55629 TCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGATCAAGACGGATATTGTGCGGA 55688 | || || | || | | |||| || |||||| | | || | Sbjct 2065 TGCGTGAGCTCAACGAGCGCGGCCTCTGGACGCCTGCCCTCAAGAACAAGCTCGTTTCGC 2124 Query 55689 ACGGGGGGTCCGTCCAGA--ATCT-GGAGATTCCTCTGCGTC-TCAAGGAGATTTACCGG 55744 || || || |||||| ||| |||||| || | || | ||||| | | ||| | Sbjct 2125 ACAACGGCTCTGTCCAGCGCATCGAGGAGATCCC-CGACGACATCAAGAGGCTGTACAAG 2183 Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTC-TGATTGACATGAGTGCTGATCGTGGTGCGTA 55803 || |||||||||||||| ||| | ||| | || |||||| || ||||| || || Sbjct 2184 ACCGTGTGGGAGATTCCCCAG-CGCGTCATCATCGACATGGCCGCCGATCGCTCGGCCTA 2242 Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863 ||| |||||| |||||| || ||| ||| ||||| | || || | |||||| | | Sbjct 2243 CATTGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCCTCGTTTGCCAAGCTCAC 2302 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 |||||||||||| || | ||| ||||| |||||||| || |||||||| || || || Sbjct 2303 CTCGATGCACTTCTATGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTACCTCCGCAC 2362 Query 55924 CCG 55926 ||| Sbjct 2363 CCG 2365 Score = 145 bits (160), Expect = 8e-30 Identities = 176/237 (74%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 |||||||||||||| | || | ||| ||| || | | |||| || ||||| ||| Sbjct 580 TCATGCGCGTCGCCATCGGCCTGCACAAGGACAACATCCCCGCG-GTGATCGAGACCTAC 638 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 ||| | | || || ||| || |||||||| || |||||||||||||| || || Sbjct 639 GACCTGCTCTCGCAGCAGCTCTTCACCCACGCCACCCCGACCCTGTTCAACGCCGGCACT 698 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | ||| ||| ||||| |||||||| || |||||||||| ||||||||||| ||| Sbjct 699 CCGCGCCCGCAGCTGTCGTCGTGCTTCCTCCTGACGATGAAGGAGGACTCGATCGAGGGC 758 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428 ||||| || || |||||| |||| |||| ||||||||||| | | || || |||||| Sbjct 759 ATCTATGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGGCGGCATCGGT 815 Score = 105 bits (116), Expect = 7e-18 Identities = 279/417 (67%), Gaps = 12/417 (3%) Strand=Plus/Plus Query 53546 GGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATT 53605 || || || ||||||||||| | || ||||||||||||||||| |||||||| ||||| Sbjct 1008 GGAGGCGGCAAGCGCAAGGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCGGACATC 1067 Query 53606 ATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTG 53665 | || || ||| | || ||| || || | || |||| ||| ||| || || Sbjct 1068 TTTGACTTCCTCAACCTCAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTC 1127 Query 53666 TT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTG 53724 || ||| || || ||||| || || ||||||||| | |||||| | | || || Sbjct 1128 TTCTACGGC-CTCTGGATCCCCGATCTCTTCATGAAGCGCGTGGAGTCTGGTGGCGACTG 1186 Query 53725 GTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTC---TACGGTGAGGAGTT 53781 || || | ||||| |||||| ||| || || | || | | ||| ||| || Sbjct 1187 GTCGCTCTTCTGCCCCAACGAGGCCCCTGGTCT---GTTTGACTCGTGGGGTAAGGTCTT 1243 Query 53782 TAACGAGATGTATCGGACG-TACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 | |||| ||| || || |||| || | |||||||| | ||||||||| Sbjct 1244 CGAGGAGAAGTA-CGAGCGCTACG-AGAGCGAGGGCCGCGCCCGCCGCGTGGTCAAGGCC 1301 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | ||| | ||| || |||||| || ||| | ||||| || ||||| |||||| Sbjct 1302 CAGGAGCTGTGGTTCGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTG 1361 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCG 53956 |||||||| | ||||| ||| ||||||| || || ||||| |||| | ||| Sbjct 1362 TACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCG 1418 >seq25559 Length=72922 Score = 152 bits (168), Expect = 6e-32 Identities = 466/708 (66%), Gaps = 32/708 (5%) Strand=Plus/Minus Query 74577 AGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGT 74636 ||||| ||||| || || | |||||||| ||| | || | |||||||||||| Sbjct 47903 AGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGCGGCGTTCATGCCGATGAGG 47844 Query 74637 TTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATC 74696 | || || | |||||||| |||||| |||| | |||| ||| ||| ||| Sbjct 47843 GCGACGGGGAGCGACTCGGTGACAAACTCCTTCTCGATCTCGACGGCCTCGAGGATGATC 47784 Query 74697 T---TGTGAATGTCTTTGGAAGGGCACTTTTCCCTCA-GGTG-AGAGTAAAGCGTCACGG 74751 | || | | ||| |||| || || | || |||| |||| | | |||| Sbjct 47783 TGCTTGGGCACGTCGGTGGAGGGCTTGTTGACGAGCATGGTGTAGAGGA----GGCACG- 47729 Query 74752 CAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAG 74811 |||| || || ||| || || | ||| |||| ||| || || | ||||| | Sbjct 47728 CAAAGTCGCAGTGGAGGCCCTCGTCGCGGCTGATCATTTCGTTACTGAAGGCCAGGCCGG 47669 Query 74812 GCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGC 74871 |||| || || |||||||| | ||| ||||||| |||||| || ||||||||||| Sbjct 47668 GCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCCGAGAAGAAGATGC 47609 Query 74872 CTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTCATCCAAG 74931 | ||||| || || |||| || || | || || ||| ||| | | | ||| | Sbjct 47608 CCTCGACGGCAGCGAACCCGACGAGACGCTCGGCAAA-GGTC--TCG-ACGCCCTCCTTG 47553 Query 74932 TCTGA-----------GCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGC 74980 | ||| ||||| || || || | ||||||| || || || ||||| || Sbjct 47552 T-TGATCCACCGCATGGCCCAGTCGGCCTTCCTCTTGACCGAGGGCACGGTGTCGATGGC 47494 Query 74981 TTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTA 75040 |||||||| ||||||| |||| ||||||||| | |||| || | || ||||| Sbjct 47493 GCGGAAGAGGTGGTCCTTCTCGACGGGGTCCTTGACGTACGTGTCGATGAGGAGCGAGTA 47434 Query 75041 CGTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTG 75099 | ||||||| || || |||| | ||| |||| | ||||||| | |||||||| | Sbjct 47433 CATCTCCGAGTGGATGTTCTCGATCG-CGATCTGGAAGCCGTAGAAGCAGCGCGCCTCCG 47375 Query 75100 CAATCTGTACATCCTT--TGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGA 75157 | ||| || ||||| |||| | | ||| |||||| |||||||||||| Sbjct 47374 GCACCTGCACCTCCTTCATGAAGCGGCC--GGCGAGGTTCTCCGCGACGATGCCGTCGCT 47317 Query 75158 GGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTC 75217 ||||||||| || || || || ||||| ||||| | ||| |||| |||| | | Sbjct 47316 GGCGGCGAAGAAGGCGAGCACGTGCTTGATGAAGTGCCTCTCGTCGTTGCTGAGCGAGGC 47257 Query 75218 CCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 ||| | |||| |||| | || || | ||||||| | |||||||| Sbjct 47256 CCAGTGGTTCATGTCCGCGCTCAGGTCGACCTCCTCGGCGGTCCAGAA 47209 >seq25649 Length=214954 Score = 96.9 bits (106), Expect = 4e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 117350 CGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTT 117409 |||||||| || ||||| ||| | | || | |||||||| ||| ||| ||| Sbjct 10803 CGCGTACCAAACTGTCCCGCCGGGTAGAGAAGCGGAACGTTGTTGGAGCCTGGAAAATTT 10862 Query 117410 TGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGC 117469 || |||| || || || || || || |||||| || ||||| || ||||||||| Sbjct 10863 TGGGCCATGTGAACGATGGTCGAGTGAAGTGACGCCTCGCCGTGGTGGTAGGCCGTCTGC 10922 Query 117470 TCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGT-CAGGTTCTTCTTGAG 117528 || | ||| ||||| |||||||||||||||||||| || | || ||| || ||||| Sbjct 10923 TCGGACACATAGCCGGCCAGCTGAGCCACCTTCATTTC-GCTGTGCAGCTTTCGCTTGAA 10981 Query 117529 GCAGGCATAAATCACCT 117545 ||| ||||| | |||| Sbjct 10982 GCACGCATACAAGACCT 10998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547036868842400