Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq16052 82.4 6e-11 >seq16052 Length=5781 Score = 82.4 bits (90), Expect = 6e-11 Identities = 112/150 (75%), Gaps = 6/150 (4%) Strand=Plus/Plus Query 52761 CCAGAGATGGGCGACAAGTTTGCGTCGTT-CACGGCGCAAAAGGG-GACGTG-CGGAGCC 52817 |||| ||| || |||||||| |||||| |||||| |||||||| | | || || ||| Sbjct 4711 CCAGTGATCGGTGACAAGTTCGCGTCGAGGCACGGC-CAAAAGGGTGTCATGTCGCAGCT 4769 Query 52818 GTCCTGACCCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATC 52877 || | | |||||| ||||||||||| | || || || |||||| |||||||| Sbjct 4770 GTG--GCCGCAGGAGAACATGCCCTTCAGCGAGTCGGGCATGTCGCCCGATGTCATCATC 4827 Query 52878 AACCCCCACGCCTTTCCCTCCAGGATGACC 52907 ||||| |||||||| || || | |||||| Sbjct 4828 AACCCGCACGCCTTCCCTTCGCGTATGACC 4857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406180719433296