Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq22622 123 2e-23 seq15340 118 9e-22 seq21073 116 3e-21 seq25702 114 1e-20 seq24868 109 5e-19 seq17601 109 5e-19 seq25697 107 2e-18 seq25321 104 2e-17 seq23693 98.7 9e-16 seq18580 93.3 4e-14 seq11928 91.5 1e-13 seq18353 86.0 5e-12 seq21899 82.4 7e-11 >seq22622 Length=4454 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1500 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 1441 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||||| || | || ||| |||||| ||| ||| Sbjct 1440 TTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 1381 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | |||||||||||||| || || | |||||| | || || ||| Sbjct 1380 TGCTTCACGTTCTCAATGGTATCGCTCGACTCAACCTCGAGCGTGATGGTCTTACCGGTC 1321 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 1320 AGAGTCTTGACGAAGATCTGCAT 1298 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 1033 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 974 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| || | || || |||||| ||| ||||| || | | Sbjct 973 GATCAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTT 914 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||| ||||| ||||| || || | || || | || ||||| || || || || Sbjct 913 TTCGATCGTGTCGCTGGACTCGACCTCGAGAGTAATGGTCTTACCCGTAAGGGTCTTGAC 854 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 853 GAAGATCTGCAT 842 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || |||| || ||||| ||||| || || Sbjct 1261 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1202 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 1201 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1142 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | | ||| || ||| ||| || || | || || | || ||||| ||||| || Sbjct 1141 CTCGATCGTGTCCGAGCT---CTCGACCTCGAGAGTAATGGTCTTACCCGTGAGCGTCTT 1085 Query 39270 AACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 1084 GACGAAGATCTGCAT 1070 >seq15340 Length=11482 Score = 118 bits (130), Expect = 9e-22 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || || ||| || || || || || ||||| || || || |||| || ||||| Sbjct 244 TGGAGSGTSGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 303 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||||| || | || ||| |||||| ||| ||| Sbjct 304 TTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 363 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||| |||||| || || | |||||| | || || ||| Sbjct 364 TGCTTCACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGCGTGATGGTCTTGCCAGTC 423 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || |||||||| ||||| Sbjct 424 AGGGTCTTGACAAAGATCTGCAT 446 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || |||||| ||| || || || || || ||||| || || || | Sbjct 687 GCGAAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCC 746 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || || || || ||||| ||||||||||| | || | || ||| || Sbjct 747 GTCCTCGAGCTGCTTACCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTT 806 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||||| || | || | | || ||||| ||||| || || | ||||| Sbjct 807 GTCCTGGATCTTCTGCTTCACGTTCTCAATGGTGTCGCTGGACTCGACCTCGAGGGTGAT 866 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || || || || ||||| ||||| Sbjct 867 GGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 902 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||| ||| || || || || || || || || || || |||| || ||||| Sbjct 472 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTACGGCCGTCCTCGAGCTGC 531 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || ||||| ||||||||||| | || | || || |||||| ||| ||| Sbjct 532 TTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTC 591 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| || |||||| || || | ||||| | ||||| ||| Sbjct 592 TGCTTCACGTTCTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCAGTC 651 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || |||||||| ||||| Sbjct 652 AGGGTCTTGACAAAGATCTGCAT 674 >seq21073 Length=984 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 793 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 852 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 853 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 912 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||||||||| || || | ||||| | || || ||||| || || || Sbjct 913 CTCAATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGAC 972 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 973 GAAGATCTGCAT 984 >seq25702 Length=8093 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || || || || || || |||| || ||||| Sbjct 2143 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCGTCCTCGAGCTGC 2202 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | | ||| |||||| ||| || Sbjct 2203 TTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTT 2262 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||||||||| || || | ||||| | || ||||| Sbjct 2263 TGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGAGTGATGGTCTTACCCGTG 2322 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || ||||| ||||| Sbjct 2323 AGCGTCTTGACGAAGATCTGCAT 2345 Score = 114 bits (126), Expect = 1e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 2705 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAA 2764 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| || || || | | Sbjct 2765 GATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTYTGCTTCACGTT 2824 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 2825 CTCGATCGTGTCGCTCGACTCGACCTCGAGAGTGATGGTCTTGCCAGTCAGGGTCTTCAC 2884 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 2885 GAAGATCTGCAT 2896 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || |||| || ||||| ||||| || || Sbjct 2933 CTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 2992 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | | ||| |||||| ||| || || || | | Sbjct 2993 GATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 3052 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | || || | || || || || || || || Sbjct 3053 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTAATGGTCTTGCCAGTGAGGGTCTTCAC 3112 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 3113 GAAGATCTGCAT 3124 >seq24868 Length=8702 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || | || || ||||| Sbjct 7474 TGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCATCCTCGAGCTGC 7415 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||||| || | || || |||||| ||| ||| Sbjct 7414 TTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTC 7355 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||| ||||| || || | ||||| | || || ||| Sbjct 7354 TGCTTCACGTTCTCGATCGTGTCGCTAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 7295 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 7294 AGAGTCTTGACGAAGATCTGCAT 7272 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || || || || || || |||| || ||||| Sbjct 7246 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGC 7187 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || || || || || ||||||||||| | ||| | || ||| |||||| ||| || Sbjct 7186 TTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTT 7127 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||||||||| || || | ||||| | || ||||| Sbjct 7126 TGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGAGTGATGGTCTTACCCGTG 7067 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 7066 AGGGTCTTGACGAAGATCTGCAT 7044 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || || || || Sbjct 7007 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 6948 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| |||| || | || ||| |||||| || || || |||| | Sbjct 6947 GATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTTTGCTTGACATT 6888 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||| |||||| || || | ||||| | || || || || || || || Sbjct 6887 CTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 6828 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 6827 GAAGATCTGCAT 6816 >seq17601 Length=6497 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 39067 AAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGT 39126 ||||| | ||| | || |||||| ||| || || || || || ||||| || || || Sbjct 5424 AAGCGAAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGG 5365 Query 39127 TCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCT 39186 |||| || ||||| ||||| || || || |||||||||||||| | ||| | || || Sbjct 5364 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCC 5305 Query 39187 TTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTG 39246 |||||| ||| ||||| || | || | | || ||||| ||||| || || | ||| Sbjct 5304 TTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTAGACTCGACCTCGAGGGTG 5245 Query 39247 ATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | || || || || || || || ||||| ||||| Sbjct 5244 ATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 5207 >seq25697 Length=27391 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || || || || Sbjct 14958 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 14899 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | | ||| |||||| ||| || || |||| | Sbjct 14898 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTTTGCTTGACGTT 14839 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || ||||| ||||| || || Sbjct 14838 CTCAATGGTGTCGCTCGACTCGACCTCGAGAGTGATGGTCTTACCCGTGAGCGTCTTCAC 14779 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 14778 GAAGATCTGCAT 14767 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| |||||||| || || || || Sbjct 15186 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAA 15127 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 15126 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 15067 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||| |||||| || || | ||||| | || || || ||||| || || Sbjct 15066 CTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGCGTCTTGAC 15007 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 15006 GAAGATCTGCAT 14995 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || |||| || ||||| ||||| || || Sbjct 14730 CTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 14671 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| |||| || | || ||| || ||| ||| ||||| || | | Sbjct 14670 GATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTATCCTGGATCTTCTGCTTCACGTT 14611 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||| |||||| || || | ||||| | || || || || || || || Sbjct 14610 CTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 14551 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 14550 GAAGATCTGCAT 14539 >seq25321 Length=10237 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || || || || Sbjct 10099 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 10040 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | | ||| |||||| ||| || || || | | Sbjct 10039 GATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 9980 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||||||||| || || | ||||| | || || ||||| || || || Sbjct 9979 CTCGATGGTATCGCTCGACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAGGGTCTTGAC 9920 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 9919 GAAGATCTGCAT 9908 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 9871 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 9812 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| |||| || | | ||| |||||| ||| ||||| || | | Sbjct 9811 GATCAGACGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACATT 9752 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||| |||||| || || | ||||| | || || || || || || || Sbjct 9751 CTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 9692 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 9691 GAAGATCTGCAT 9680 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 39128 CGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTT 39187 |||| || ||||| ||||| || || || ||||||||||| |||| || | | ||| | Sbjct 9495 CGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCGGGAGGGATACCCTCCT 9436 Query 39188 TGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 ||||| ||| ||||| || | || | | ||| ||| |||||| || || | |||| Sbjct 9435 TGTCCTGGATCTTCTGCTTCACATTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGA 9376 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | || || || || || || || ||||| ||||| Sbjct 9375 TAGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 9339 >seq23693 Length=4026 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || |||| || ||||| ||||| || || Sbjct 3605 CTCCTTATGGATGTTGTAGTCCGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 3664 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 3665 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 3724 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||| |||||| || || | |||||| | || || || || || || || Sbjct 3725 CTCGATGGTGTCGGACGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTCAC 3784 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 3785 GAAGATCTGCAT 3796 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| | | ||| | ||| | || || ||| ||| || || || || || || Sbjct 3338 CATGCCTCCACGAAGGCGAAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 3397 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 || || || || |||| || ||||| || || || || || || |||||||| || | Sbjct 3398 AGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCAGG 3457 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 || | || || |||||| ||| || || || | || | | |||||||||||||| Sbjct 3458 AGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTATCGCTCGACTC 3517 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || | || || | || || ||||| || || || ||||| ||||| Sbjct 3518 GACCTCGAGGGTAATGGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 3568 >seq18580 Length=2690 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| | | ||| | ||| | || || || ||| || || || || || || Sbjct 2652 CATGCCTCCACGAAGGCGAAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 2593 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||| || || || |||| || ||||| ||||| || || || || ||||||||||| | Sbjct 2592 GGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGG 2533 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 ||| | | ||| |||||| ||| ||||| || | || | | || ||| |||||| Sbjct 2532 GGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATGGTGTCGGACGACTC 2473 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || | ||||| | || || || || || || || ||||| ||||| Sbjct 2472 GACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 2422 >seq11928 Length=172 Score = 91.5 bits (100), Expect = 1e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 39067 AAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGT 39126 ||||| | ||| | || |||||| ||| || || || || || ||||| || || || Sbjct 171 AAGCGAAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGG 112 Query 39127 TCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCT 39186 | || |||||||| ||||| || || |||||||||||||| |||| || | | ||| Sbjct 111 CCATCCTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCGGGAGGGATACCCTCC 52 Query 39187 TTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236 |||||| ||| ||||| || | || | | ||| ||| |||||| || Sbjct 51 TTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGGACGACTCGAC 2 >seq18353 Length=6497 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || |||| || ||||| || || || || Sbjct 1100 CTCCTTCTGGATGTTGTAGTCCGCGAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 1159 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | | ||| |||||| ||| ||||| || | | Sbjct 1160 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1219 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||| |||||| || || | ||||| | || || || || || || || Sbjct 1220 CTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 1279 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 1280 GAAGATCTGCAT 1291 >seq21899 Length=10926 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || | || || ||||| Sbjct 1992 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCATCCTCCAGCTGC 1933 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || ||||||||||| || | ||| | | ||| |||||| || || Sbjct 1932 TTGCCGGCGAAGATCAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGAATCTTT 1873 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || |||| || | | || ||| |||||| || || | ||||| | || ||||| Sbjct 1872 TGCTTGACATTCTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTACCCGTG 1813 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 1812 AGGGTCTTGACGAAGATCTGCAT 1790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429408503541644