Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq23635 93.3 2e-14 >seq23635 Length=26547 Score = 93.3 bits (102), Expect = 2e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 31076 GCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACATGTCCGCCAGG 31135 |||||||| | ||||||||| ||||| | || ||||| || || |||| |||| || | Sbjct 12336 GCGATCTGTTGTGTGAGCCGCTCCTGGATCTGGAGGCGTCGCGCGAACATCTCCGACACG 12277 Query 31136 CGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTGATCGTGACCGTG 31195 || | ||||||||| ||||| | | ||| || ||||||| ||| |||| || Sbjct 12276 CGAGCCAGCTTGCTGAGGCCGAGCACCTTCTTGTTGGGGATGTAGCCGATGTGGACCTTG 12217 Query 31196 CCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGTCGCGCACCGTC 31255 ||| ||| || | ||| || ||||| | ||| ||| |||||||||||| | Sbjct 12216 CCGTAGAAGGGAATCATGTGGTGTTCGCACAGCGAGAAGAGATCGATGTCGCGCACGATG 12157 Query 31256 ACCATCTGGTCATGCTTCTCC 31276 ||||| | || || |||||| Sbjct 12156 ACCATGTCCTCGTGGTTCTCC 12136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187231356211968