Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F000826285.1_202015-01-
07] 79,048 sequences; 66,025,675 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq69527 143 2e-29
seq79045 140 3e-28
seq66934 129 5e-25
seq66207 129 5e-25
seq78127 120 3e-22
seq78417 118 9e-22
seq76656 118 9e-22
seq67883 118 9e-22
seq48106 118 9e-22
seq24034 113 4e-20
seq28013 105 6e-18
seq36372 104 2e-17
seq77962 102 7e-17
seq76450 100 2e-16
seq60859 98.7 9e-16
seq30245 98.7 9e-16
seq11945 96.9 3e-15
seq16531 95.1 1e-14
seq12680 95.1 1e-14
seq30341 93.3 4e-14
seq8679 91.5 1e-13
seq62930 89.7 4e-13
seq69685 87.8 2e-12
seq26282 82.4 7e-11
seq22740 82.4 7e-11
>seq69527
Length=538
Score = 143 bits (158), Expect = 2e-29
Identities = 158/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||||| || || |||||||| || | ||||| |||||
Sbjct 307 CACCAAGTGGAGGGTGGACTCCTTCTGNATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTC 248
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || ||| ||||||| |||||||| |||||||| ||||||||||||||
Sbjct 247 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 188
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| ||||| || || | |||| ||| || || ||| ||||||| || | || ||
Sbjct 187 GATCTTTTGCTTCACGTTCTCGATGGTATCGCTGGACTCAACCTCGAGCGTAATAGTCTT 128
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| ||||| || || || || |||||||||
Sbjct 127 GCCAGTCAGCGTCTTGACGAAGATCTGCATG 97
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| || ||||| ||||| ||||| || ||
Sbjct 522 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCG 463
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| ||||||| |||||||| || ||||| || ||||||||||| || || || ||
Sbjct 462 GCGAAGATGAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTCTGCTTC 403
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | ||||||||||| || | ||| || || || || ||
Sbjct 402 ACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGCGTAATCGTCTTACCCGTAAGGGTC 343
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 342 TTGACGAAGATCTGCATG 325
>seq79045
Length=6779
Score = 140 bits (154), Expect = 3e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| || || || ||||||||||| || |||
Sbjct 3462 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCA 3521
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| ||||||| |||||||| || ||||| || ||||||||||| || || || ||
Sbjct 3522 GCGAAGATGAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTC 3581
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | |||||||| | ||||||||||| || | || ||||||||||||||
Sbjct 3582 ACGTTCTCAATGGTGTCCGAGGACTCGACCTCGAGCGTAATGGTCTTGCCGGTCAGAGTC 3641
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 3642 TTGACGAAGATCTGCAT 3658
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| || ||||| ||||||||||| || |||
Sbjct 3234 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 3293
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| ||||||| |||||||| || || || |||||||||||||| || || || ||
Sbjct 3294 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 3353
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | ||| ||||||| || | ||| || || || || |||
Sbjct 3354 ACGTTCTCGATCGTGTCGGACGACTCTACCTCGAGCGTAATCGTCTTACCCGTAAGGGTT 3413
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 3414 TTCACGAAGATCTGCAT 3430
Score = 109 bits (120), Expect = 5e-19
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||| ||||| || || ||| ||||||| |||||||| ||||| || |||||||| |||
Sbjct 3780 TCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCTTTG 3839
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
|| || || || || || | |||| ||||||| | ||||||||||| || |
Sbjct 3840 TCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGGACTCGACCTCGAGCGTAATG 3899
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||||||| || || || || || ||||||||
Sbjct 3900 GTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 3934
>seq66934
Length=1683
Score = 129 bits (142), Expect = 5e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||| || ||||| |||||||||||
Sbjct 289 GTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCGAGCTG 230
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| ||||| ||||||| |||||||| || || || |||||||||||||| || ||
Sbjct 229 CTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 170
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||| || || | |||| ||| || | ||||||||||| || | || ||||| ||
Sbjct 169 TTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGCGTAATAGTCTTGCCAGT 110
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
||| || || || || ||||||||
Sbjct 109 CAGCGTCTTGACGAAGATCTGCAT 86
>seq66207
Length=742
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || ||||| || || |||||||| || | ||||| ||||||
Sbjct 252 ACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCG 193
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| ||||||| |||||||| || || || ||||||||||||||
Sbjct 192 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 133
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || || | || | |||||||| | ||||||||||| || | || |||
Sbjct 132 ATCTTCTGCTTCACGTTCTCAATGGTGTCCGAGGACTCGACCTCGAGCGTAATAGTCTTG 73
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || || ||||||||
Sbjct 72 CCAGTCAGGGTCTTGACGAAGATCTGCAT 44
>seq78127
Length=10502
Score = 120 bits (132), Expect = 3e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 118545 GACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCG 118604
||||| || || |||||||| || | ||||| ||||| ||||| || || |||
Sbjct 1 GACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCG 60
Query 118605 TAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACC 118664
||||||| |||||||| ||||| || |||||||||||||| || || || || ||
Sbjct 61 AAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACG 120
Query 118665 TGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTT 118724
| || | |||||||| | ||||||||||| || | || |||||||| || || ||
Sbjct 121 TTCTCAATGGTGTCCGAGGACTCGACCTCGAGCGTAATAGTCTTGCCGGTGAGGGTCTTC 180
Query 118725 ACAAAAATCTGCAT 118738
|| || ||||||||
Sbjct 181 ACGAAGATCTGCAT 194
>seq78417
Length=4549
Score = 118 bits (130), Expect = 9e-22
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| || | ||||| ||||| ||||| || ||
Sbjct 1077 GTTGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCG 1136
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| || |||||||| ||||| || |||||||||||||| ||| || || ||
Sbjct 1137 GCGAAGATAAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTC 1196
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||||| | ||||||||||| || | || |||||||| || ||
Sbjct 1197 ACGTTCTCAATSGTGTCCGAGGACTCGACCTCGAGCGTAATGGTCTTGCCGGTGAGGGTC 1256
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 1257 TTCACGAAGATCTGCAT 1273
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||| || ||||| |||||||||||
Sbjct 761 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCGAGCTG 820
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| ||||| ||||||| |||||||| || || || |||||||||||||| || ||
Sbjct 821 CTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 880
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || || | |||| ||||| | ||| ||||||| || | ||| || || ||
Sbjct 881 CTGCTTCACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGCGTGATCGTCTTTCCCGT 940
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||||||
Sbjct 941 AAGGGTCTTGACGAAGATCTGCAT 964
>seq76656
Length=3208
Score = 118 bits (130), Expect = 9e-22
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 118545 GACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCG 118604
||||| || || |||||||| || | || || ||||| ||||| || ||||||
Sbjct 253 GACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCG 312
Query 118605 TAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACC 118664
|||| || |||||||| ||||| || |||||||||||||| ||| || || || ||
Sbjct 313 AAGATAAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACG 372
Query 118665 TGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTT 118724
| || | ||||||| | ||||||||||| || | || |||||||| || || ||
Sbjct 373 TTCTCAATSGTGTCCGAGGACTCGACCTCGAGCGTAATGGTCTTGCCGGTGAGGGTCTTC 432
Query 118725 ACAAAAATCTGCAT 118738
|| || ||||||||
Sbjct 433 ACGAAGATCTGCAT 446
Score = 82.4 bits (90), Expect = 7e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 118614 CGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACG 118673
|||||||| || || || |||||||||||||| || || || || || | |||| |
Sbjct 2 CGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACATTCTCGATG 61
Query 118674 GTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATC 118733
||||| | ||||||||||| || | || ||||| |||||||| || || || |||
Sbjct 62 GTGTCGCTCGACTCGACCTCGAGCGTAATGGTCTTGCCAGTCAGAGTCTTGACGAAGATC 121
Query 118734 TGCAT 118738
|||||
Sbjct 122 TGCAT 126
>seq67883
Length=310
Score = 118 bits (130), Expect = 9e-22
Identities = 122/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||| || ||||| |||||||||||
Sbjct 151 GTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCGAGCTG 210
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||| ||||||||||| |||||||| |||||||||||||| || ||
Sbjct 211 CTTGCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 270
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCG 118694
|| || || | |||| |||||||| | ||| ||||||
Sbjct 271 CTGCTTCACGTTCTCGATGGTGTCCGAGGACTCAACCTCG 310
>seq48106
Length=172
Score = 118 bits (130), Expect = 9e-22
Identities = 116/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||| ||||| || || ||| ||||||| |||||||| |||||||| ||||||||||||
Sbjct 23 TCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTG 82
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
|| ||| || || || || | |||| |||||||| | ||||||||||| || |
Sbjct 83 TCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTCGACCTCGAGCGTAATG 142
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATC 118733
|| |||||||| || || || || || |||
Sbjct 143 GTCTTGCCGGTGAGGGTCTTCACGAAGATC 172
>seq24034
Length=175
Score = 113 bits (124), Expect = 4e-20
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||||||||| || |||||| |||||||||||||||| || || || ||||||||||||
Sbjct 162 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTG 103
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
|| || || || || || | |||| ||| || || ||||||||||| || |
Sbjct 102 TCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTGGACTCGACCTCGAGCGTAATA 43
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| || || || || ||||||||
Sbjct 42 GTCTTACCAGTCAGGGTCTTGACGAAGATCTGCAT 8
>seq28013
Length=187
Score = 105 bits (116), Expect = 6e-18
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| || || || ||||||||||| || || ||| |||||
Sbjct 2 TTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATG 61
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
||||||||||| || || || || ||||||||||| || || || || || | |||
Sbjct 62 AGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCG 121
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| |||||| | ||||||||||| || | ||| || || || || || || || ||
Sbjct 122 ATGGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTACCCGTAAGGGTCTTGACGAAG 181
Query 118731 ATCTGC 118736
||||||
Sbjct 182 ATCTGC 187
>seq36372
Length=127
Score = 104 bits (114), Expect = 2e-17
Identities = 93/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || |||||||| ||| || || || ||||||
Sbjct 118 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCATCCTC 59
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|||||| || || ||| |||||||||||||||| || || || ||||||||||||||
Sbjct 58 GAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 2
>seq77962
Length=8127
Score = 102 bits (112), Expect = 7e-17
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||||||||| || || ||| |||||||||||||||| || || || || |||||||||
Sbjct 6475 TCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTG 6416
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
|| || || || || || | || | ||||||| ||||||||||| ||| |
Sbjct 6415 TCCTGGATCTTCTGCTTGACGTTCTCAATAGTGTCCGAAGACTCGACCTCGAGGGTGATG 6356
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| ||||| || || || || || || || ||||||
Sbjct 6355 GTCTTGCCAGTAAGGGTCTTGACGAAGATTTGCATG 6320
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || || || || || |||||||| ||| || || || ||||| |||||
Sbjct 6839 GTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTG 6780
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| | ||||| |||||||| || || || || |||||||| || ||| ||
Sbjct 6779 CTTGCCGGCGAAAATGAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATCTT 6720
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || || | |||| |||||||| ||||||||||| || | || || || ||
Sbjct 6719 CTGCTTCACGTTCTCGATGGTGTCCGACGACTCGACCTCGAGAGTAATAGTCTTACCCGT 6660
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || |||||
Sbjct 6659 CAAGGTCTTGACGAAGATTTGCAT 6636
>seq76450
Length=2916
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
|| |||||| | | | ||||||||||| || ||||| || || |||||||| |||
Sbjct 872 ACATCCGCGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTACTCGGC 931
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| ||||| | ||||||||||| || |||||| |||| | || ||||| ||||||||
Sbjct 932 GAGCGTGCGGCTCTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGTTGCTGGTCGGGAGG 991
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGA 118689
|| || |||||||| | || || || || |||| || ||| | | ||| |
Sbjct 992 AATTCCTTCCTTGTCCTGCAGCTTGTGCTTGACGGTCTCGATGGAGTCGGAGGAACTC-A 1050
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | | |||||||| || || || | || ||||||||
Sbjct 1051 CCTCCAGGGTGATGGACTTGCCGGTGAGGGTCTTGATGAAGATCTGCAT 1099
>seq60859
Length=127
Score = 98.7 bits (108), Expect = 9e-16
Identities = 98/127 (77%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||||||| || |||||| ||||||| |||||||| || || || ||||||||||||||
Sbjct 1 CTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 60
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
||| || || || || | |||| ||||||| | ||||||||||| || | ||
Sbjct 61 CTGAATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGGACTCGACCTCGAGCGTAATGGT 120
Query 118706 TTTGCCG 118712
||||||
Sbjct 121 CTTGCCG 127
>seq30245
Length=127
Score = 98.7 bits (108), Expect = 9e-16
Identities = 98/127 (77%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 118610 GAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTC 118669
|||||||||||| || || || |||||||||||||| || ||||| || || | ||
Sbjct 1 GAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTC 60
Query 118670 GACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
|| ||||||| | ||||||||||| || | || |||||||||||||| || || ||
Sbjct 61 GATCGTGTCCGAGGACTCGACCTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAA 120
Query 118730 AATCTGC 118736
||||||
Sbjct 121 GATCTGC 127
>seq11945
Length=157
Score = 96.9 bits (106), Expect = 3e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642
|||||||||||| || || ||| |||||||||||||||| || || || |||||||||||
Sbjct 142 ATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTT 83
Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702
||| || ||||| || || | |||| ||||| | ||||||||| | || |
Sbjct 82 GTCCTGGATCTTTTGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCAAGAGTGAT 23
Query 118703 CGTTTTGCCGGTCAGAGTTTT 118723
|| ||||| ||||| || ||
Sbjct 22 GGTCTTGCCAGTCAGGGTCTT 2
>seq16531
Length=127
Score = 95.1 bits (104), Expect = 1e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||||||||| || |||||| |||||||||||||||| || || || || |||||||||
Sbjct 14 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTG 73
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGA 118695
|| || || || || || | || | |||||||| | |||||||||||
Sbjct 74 TCCTGGATCTTCTGCTTCACGTTCTCAATGGTGTCCGAGGACTCGACCTCGA 125
>seq12680
Length=217
Score = 95.1 bits (104), Expect = 1e-14
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||||| || || |||||||| ||| || ||||| |||||
Sbjct 79 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGACCGTCCTC 138
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|||||| || || || ||||||| |||||||| || || || || |||||||||||
Sbjct 139 GAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 195
>seq30341
Length=157
Score = 93.3 bits (102), Expect = 4e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642
|||||||||||| || || ||| |||||||||||||||| || || || || ||||||||
Sbjct 142 ATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATTCCCTCCTT 83
Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702
||| || || || || || | || | ||||||| ||||||||||| ||| |
Sbjct 82 GTCCTGGATCTTCTGCTTCACGTTCTCAATAGTGTCCGAAGACTCGACCTCGAGGGTGAT 23
Query 118703 CGTTTTGCCGGTCAGAGTTTT 118723
|| ||||| || || || ||
Sbjct 22 GGTCTTGCCAGTAAGGGTCTT 2
>seq8679
Length=193
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||||||||| || || ||| ||||||| |||||||| || || || |||||||||||
Sbjct 189 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTA 130
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
|| || || || || || | || | || || || ||||||||||| || | |
Sbjct 129 TCCTGGATCTTCTGCTTGACATTCTCAATAGTATCGCTGGACTCGACCTCGAGCGTGATC 70
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || || || || ||||||||
Sbjct 69 GTCTTACCCGTAAGGGTCTTGACGAAGATCTGCAT 35
>seq62930
Length=430
Score = 89.7 bits (98), Expect = 4e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| || | || || |||||||||||| || ||
Sbjct 183 GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCG 124
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| || |||||||| || || || |||||||||||||| || || || ||
Sbjct 123 GCGAAGATAAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 64
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | ||||||||| | || | || ||||| ||||| ||
Sbjct 63 ACGTTCTCGATCGTGTCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTC 4
Query 118722 TT 118723
||
Sbjct 3 TT 2
>seq69685
Length=5022
Score = 87.8 bits (96), Expect = 2e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||| | || || |||||||||||
Sbjct 112 GTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTG 53
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| || ||| |||||||||||||||| || || || ||||||||||||||
Sbjct 52 CTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 2
>seq26282
Length=103
Score = 82.4 bits (90), Expect = 7e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642
|||||||||||| || |||||| ||||||| |||||||| ||||| || |||||||||||
Sbjct 22 ATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTT 81
Query 118643 GTC 118645
|||
Sbjct 82 GTC 84
>seq22740
Length=148
Score = 82.4 bits (90), Expect = 7e-11
Identities = 96/130 (74%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 118610 GAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTC 118669
||| |||||||| ||||| || |||||||||||||| ||| || || || || | ||
Sbjct 1 GAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTC 60
Query 118670 GACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| ||||||| | ||||||||| | || | ||| || || || || || || || ||
Sbjct 61 AATAGTGTCCGAGGACTCGACCTCAAGCGTGATCGTCTTACCCGTAAGGGTCTTGACGAA 120
Query 118730 AATCTGCATG 118739
|||||||||
Sbjct 121 GATCTGCATG 130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433412448877216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |