Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F000826285.1_202015-01- 07] 79,048 sequences; 66,025,675 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq77892 96.9 2e-15 >seq77892 Length=46295 Score = 96.9 bits (106), Expect = 2e-15 Identities = 112/145 (77%), Gaps = 6/145 (4%) Strand=Plus/Plus Query 71418 GGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTT 71477 |||||| | || || |||||||| ||||||||||||| ||||||| || || || Sbjct 32701 GGTCATGCGCGACGGGAAGGCGTGCGGGTTGATGATGACGTCGGGCGACATGCCCGACTC 32760 Query 71478 GTCGAAGGGCATGTCCTCCTGGGTCAGGACAGCTCCG-CATGTC-CCCTTTTGCGCCGTG 71535 | ||||||||||| |||||| | | |||||| || |||| | |||||||| |||||| Sbjct 32761 GCTGAAGGGCATGTTCTCCTGAGGC--CACAGCTGCGACATGACGCCCTTTTG-GCCGTG 32817 Query 71536 -AATGACGCAAACTTGTCGCCCATC 71559 ||||||||||||||||| ||| Sbjct 32818 TCGCGACGCAAACTTGTCGCCAATC 32842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338438434838592