Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F000826285.1_202015-01- 07] 79,048 sequences; 66,025,675 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq19532 131 1e-25 seq4060 127 1e-24 seq44834 122 6e-23 seq40142 122 6e-23 seq31831 122 6e-23 seq15018 122 6e-23 seq14013 122 6e-23 seq54042 120 2e-22 seq1194 120 2e-22 seq44917 118 7e-22 seq44835 118 7e-22 seq28182 118 7e-22 seq12422 118 7e-22 seq56406 111 1e-19 seq69527 107 1e-18 seq18086 105 4e-18 seq51422 102 5e-17 seq3381 102 5e-17 seq56762 100 2e-16 seq54443 100 2e-16 seq48426 100 2e-16 seq46438 100 2e-16 seq43073 100 2e-16 seq37286 100 2e-16 seq35107 100 2e-16 seq32755 100 2e-16 seq28479 100 2e-16 seq23326 100 2e-16 seq15276 100 2e-16 seq8599 100 2e-16 seq6677 100 2e-16 seq2993 100 2e-16 seq66934 96.9 2e-15 seq79045 95.1 8e-15 seq48225 95.1 8e-15 seq37249 93.3 3e-14 seq35994 93.3 3e-14 seq24374 93.3 3e-14 seq24197 91.5 1e-13 seq62001 89.7 3e-13 seq59809 89.7 3e-13 seq23302 89.7 3e-13 seq77962 87.8 1e-12 seq59810 87.8 1e-12 seq56890 86.0 4e-12 seq36427 86.0 4e-12 seq36426 86.0 4e-12 seq921 86.0 4e-12 seq59838 84.2 1e-11 seq56216 84.2 1e-11 seq20123 84.2 1e-11 seq8937 84.2 1e-11 seq5206 84.2 1e-11 seq26699 82.4 5e-11 seq7371 82.4 5e-11 >seq19532 Length=127 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| | | |||||||||| ||||||||||| Sbjct 115 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGTAATCTCGT 56 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 55 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 21 >seq4060 Length=127 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| | | |||||||||| || |||||||| Sbjct 31 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTTGTAGATAGGGACAGTGGGAATCTCGT 90 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 91 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 125 >seq44834 Length=119 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| | | ||||||| || || |||||||| Sbjct 15 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTGGTAGATATGGACAGTGGGAATCTCGT 74 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 75 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 109 >seq40142 Length=127 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| | | |||||||| | || |||||||| Sbjct 22 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTGGTAGATAGTGACAGTGGGAATCTCGT 81 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 82 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 116 >seq31831 Length=127 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| | | |||||||||| || ||| |||| Sbjct 9 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATATCGT 68 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 69 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 103 >seq15018 Length=127 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| | | |||||||||| || ||||| || Sbjct 121 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATCTAGT 62 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 61 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 27 >seq14013 Length=127 Score = 122 bits (134), Expect = 6e-23 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG----GT-AATCTCGT 25956 ||||||||||||||||||||||||||||| | | |||||||||| || |||||||| Sbjct 14 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGTGAATCTCGT 73 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 74 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 108 >seq54042 Length=127 Score = 120 bits (132), Expect = 2e-22 Identities = 83/94 (88%), Gaps = 5/94 (5%) Strand=Plus/Minus Query 25903 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTT 25957 |||||||||||||||||||||||||||| | | |||||||||| || ||||||||| Sbjct 127 AGCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATCTCGTT 68 Query 25958 AATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| | |||||||||||||||||||||||||||| Sbjct 67 AATACATTCATGCGCGTCACTAATTAGATGACGA 34 >seq1194 Length=127 Score = 120 bits (132), Expect = 2e-22 Identities = 83/94 (88%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| | |||||||||| || |||||||| Sbjct 34 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGTGTGGTAGATAGGGACAGTGGGAATCTCGT 93 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACG 25990 |||||| ||||||||||||||||||||||||||| Sbjct 94 TAATCCATTCATGCGCGTCACTAATTAGATGACG 127 >seq44917 Length=107 Score = 118 bits (130), Expect = 7e-22 Identities = 82/93 (88%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 ||||||||||||||||||||||||||||| | | |||||||||| | |||||||| Sbjct 15 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTTGGTGGTAGATAGGGACAGTTGGAATCTCGT 74 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 |||||| |||||||||||||||||||||||||| Sbjct 75 TAATCCATTCATGCGCGTCACTAATTAGATGAC 107 >seq44835 Length=119 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 ||||||||||||||||||||||||||||| | | ||||||| || | |||||||| Sbjct 15 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTGGTAGATATGGACAGTTGGAATCTCGT 74 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 75 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 109 >seq28182 Length=127 Score = 118 bits (130), Expect = 7e-22 Identities = 82/93 (88%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 ||||||||||||||||||||||||||| | | |||||||||| || |||||||||| Sbjct 127 GCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATCTCGTTA 68 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||||||||||| Sbjct 67 ATCAATTCATGCGCGTCACTAATTAGATGACGA 35 >seq12422 Length=107 Score = 118 bits (130), Expect = 7e-22 Identities = 82/93 (88%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 ||||||||||||||||||||||||||||| | | |||||||||| | |||||||| Sbjct 15 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTTGGAATCTCGT 74 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 |||||| |||||||||||||||||||||||||| Sbjct 75 TAATCCATTCATGCGCGTCACTAATTAGATGAC 107 >seq56406 Length=127 Score = 111 bits (122), Expect = 1e-19 Identities = 78/89 (88%), Gaps = 5/89 (6%) Strand=Plus/Minus Query 25908 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCC 25962 ||||||||||||||||||||||| | | |||||||||| || |||||||||||||| Sbjct 127 GTTCCCTTGGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATCTCGTTAATCC 68 Query 25963 TTTCATGCGCGTCACTAATTAGATGACGA 25991 || ||||||||||||||||||||||||| Sbjct 67 ATTAATGCGCGTCACTAATTAGATGACGA 39 >seq69527 Length=538 Score = 107 bits (118), Expect = 1e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167 |||||| || || ||| |||||| || || ||||| |||| | || |||| || Sbjct 307 CACCAAGTGGAGGGTGGACTCCTTCTGNATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTC 248 Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 | || || ||||| || || ||||| || || |||| |||| ||| || |||||| Sbjct 247 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 188 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 || ||||||||||| |||| || ||||| | ||||| || | |||||||| || Sbjct 187 GATCTTTTGCTTCACGTTCTCGATGGTATCGCTGGACTCAACCTCGAGCGTAATAGTCTT 128 Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || |||| || || ||||| ||||||||| Sbjct 127 GCCAGTCAGCGTCTTGACGAAGATCTGCATG 97 >seq18086 Length=127 Score = 105 bits (116), Expect = 4e-18 Identities = 75/86 (87%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 25911 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTT 25965 |||||||||||||||||||| | | |||||||||| || |||||||||||||| || Sbjct 1 CCCTTGGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 60 Query 25966 CATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||||| Sbjct 61 CATTCGCGTCACTAATTAGATGACGA 86 >seq51422 Length=127 Score = 102 bits (112), Expect = 5e-17 Identities = 69/77 (90%), Gaps = 3/77 (4%) Strand=Plus/Minus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG- 20007 |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| || Sbjct 127 CTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCGC 68 Query 20008 --GTAATATTTAGCCTT 20022 | ||||||||||||| Sbjct 67 TTGAAATATTTAGCCTT 51 >seq3381 Length=127 Score = 102 bits (112), Expect = 5e-17 Identities = 73/84 (87%), Gaps = 5/84 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||| |||||||| | | |||||||||| || |||||||| Sbjct 44 AAGCCCGTTCCCTTGGCTGTTGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATCTCGT 103 Query 25957 TAATCCTTTCATGCGCGTCACTAA 25980 |||||| ||||||||||||||||| Sbjct 104 TAATCCATTCATGCGCGTCACTAA 127 >seq56762 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||| | Sbjct 86 CTCTCTTTTCAAAGTCCTTTTCCCCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 27 Query 20007 G---GTAATATTTAGCCTT 20022 | | ||||||||||||| Sbjct 26 GCTTGCAATATTTAGCCTT 8 >seq54443 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||||||||||||||||| ||||||||||||||| | Sbjct 22 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTTTTCGCTATCGGTCTCTC 81 Query 20007 G---GTAATATTTAGCCTT 20022 | | ||||||||||||| Sbjct 82 GCTTGCAATATTTAGCCTT 100 >seq48426 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||||||||||||||||||||||||||| ||||| | Sbjct 12 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCTGTCTCTC 71 Query 20007 G---GTAATATTTAGCCTT 20022 | | ||||||||||||| Sbjct 72 GCTTGCAATATTTAGCCTT 90 >seq46438 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||||| |||||||||||||||||||||| | Sbjct 29 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACTGTACTTGTTCGCTATCGGTCTCTC 88 Query 20007 G---GTAATATTTAGCCTT 20022 | | ||||||||||||| Sbjct 89 GCTTGCAATATTTAGCCTT 107 >seq43073 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 71/79 (90%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTC--TC 20004 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| || Sbjct 121 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTATC 62 Query 20005 GC-GGTAATATTTAGCCTT 20022 || | ||||||||||||| Sbjct 61 GCTTGCAATATTTAGCCTT 43 >seq37286 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||| | |||||||||||||||||||||||||||||||||| | Sbjct 85 CTCTCTTTTCAAAGTCCTTTTAACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 26 Query 20007 G---GTAATATTTAGCCTT 20022 | | ||||||||||||| Sbjct 25 GCTTGCAATATTTAGCCTT 7 >seq35107 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 71/79 (90%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTC-- 20004 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 123 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTA 64 Query 20005 GC-GGTAATATTTAGCCTT 20022 || | ||||||||||||| Sbjct 63 GCTTGCAATATTTAGCCTT 45 >seq32755 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||| |||||||||||||||||||||||||||| | Sbjct 93 CTCTCTTTTCAAAGTCCTTTTCACCTTTCACTCACGGTACTTGTTCGCTATCGGTCTCTC 34 Query 20007 G---GTAATATTTAGCCTT 20022 | | ||||||||||||| Sbjct 33 GCTTGCAATATTTAGCCTT 15 >seq28479 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| | Sbjct 88 CTCTCTTTTCAAAGTCCTTTTCACATTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 29 Query 20007 G---GTAATATTTAGCCTT 20022 | | ||||||||||||| Sbjct 28 GCTTGCAATATTTAGCCTT 10 >seq23326 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||| | Sbjct 96 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTAACGGTACTTGTTCGCTATCGGTCTCTC 37 Query 20007 G---GTAATATTTAGCCTT 20022 | | ||||||||||||| Sbjct 36 GCTTGCAATATTTAGCCTT 18 >seq15276 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||||||||||||||||||||| |||||| | Sbjct 115 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATAGGTCTCTC 56 Query 20007 G---GTAATATTTAGCCTT 20022 | | ||||||||||||| Sbjct 55 GCTTGCAATATTTAGCCTT 37 >seq8599 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||| | Sbjct 80 CTCTCTTTTCAAAGTCATTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 21 Query 20007 G---GTAATATTTAGCCTT 20022 | | ||||||||||||| Sbjct 20 GCTTGCAATATTTAGCCTT 2 >seq6677 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 71/79 (90%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG--TCTC 20004 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||| |||| Sbjct 119 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTATCTC 60 Query 20005 GC-GGTAATATTTAGCCTT 20022 || | ||||||||||||| Sbjct 59 GCTTGCAATATTTAGCCTT 41 >seq2993 Length=127 Score = 100 bits (110), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||||| ||||||||||||||||||||||||||| | Sbjct 94 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCATCACGGTACTTGTTCGCTATCGGTCTCTC 35 Query 20007 G---GTAATATTTAGCCTT 20022 | | ||||||||||||| Sbjct 34 GCTTGCAATATTTAGCCTT 16 >seq66934 Length=1683 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | || ||| | || | || ||||| |||||| || || ||||| || | | Sbjct 312 CCACCACGCAGACGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 253 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || || || ||||| || ||||| || || || | |||| Sbjct 252 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGG 193 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTCAA 38268 | ||| || |||||| || ||||||||||| |||| || |||| ||| || || | Sbjct 192 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTATCGCTCGAC--TCGA 135 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | |||||||| || || |||| || || ||||| |||||||| Sbjct 134 CCTCGAGCGTAATAGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 86 >seq79045 Length=6779 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 |||||||| |||||| || || ||||| || | || || |||| || | || Sbjct 3228 TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 3287 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || || || || ||||| || || || | ||||| ||| || |||||| || || Sbjct 3288 TTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 3347 Query 38235 TGCTTCACATTCTGGACAGTATCT--CCACTTTCAACTTCTAATGTAATAGTTTTACCCG 38292 |||||||| |||| || || || | ||| | || || | ||||| || ||||||| Sbjct 3348 TGCTTCACGTTCTCGATCGTGTCGGACGACTCT--ACCTCGAGCGTAATCGTCTTACCCG 3405 Query 38293 TCAAGGTTTTCACGAATATCTGCAT 38317 | | |||||||||||| |||||||| Sbjct 3406 TAAGGGTTTTCACGAAGATCTGCAT 3430 >seq48225 Length=106 Score = 95.1 bits (104), Expect = 8e-15 Identities = 69/80 (86%), Gaps = 5/80 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||| |||||||||||| | | |||||||||| || |||||||| Sbjct 80 AAGCCCGTTCCCTTGGATGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATCTCGT 21 Query 25957 TAATCCTTTCATGCGCGTCA 25976 |||||| ||||||||||||| Sbjct 20 TAATCCATTCATGCGCGTCA 1 >seq37249 Length=66 Score = 93.3 bits (102), Expect = 3e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 62 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 3 Query 20007 G 20007 | Sbjct 2 G 2 >seq35994 Length=127 Score = 93.3 bits (102), Expect = 3e-14 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct 65 TTACTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 6 Query 20004 CGCG 20007 | || Sbjct 5 CTCG 2 >seq24374 Length=66 Score = 93.3 bits (102), Expect = 3e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 65 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 6 Query 20007 G 20007 | Sbjct 5 G 5 >seq24197 Length=127 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/78 (86%), Gaps = 5/78 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||| |||||||||||||| | | |||||||||| || |||||||| Sbjct 50 AAGCCCGTTCCCTTTGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATCTCGT 109 Query 25957 TAATCCTTTCATGCGCGT 25974 |||||| ||||||||||| Sbjct 110 TAATCCATTCATGCGCGT 127 >seq62001 Length=65 Score = 89.7 bits (98), Expect = 3e-13 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct 57 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 1 >seq59809 Length=64 Score = 89.7 bits (98), Expect = 3e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| || Sbjct 64 CTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCG 6 >seq23302 Length=127 Score = 89.7 bits (98), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 3/73 (4%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| || ||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 55 CTCTCTTTTAAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 114 Query 20007 G---GTAATATTT 20016 | | ||||||| Sbjct 115 GCTTGCAATATTT 127 >seq77962 Length=8127 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||| || || ||||| || | || ||| |||| || | || || ||||| || Sbjct 6826 TCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAA 6767 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || ||||| || || || | ||| | || || || ||| ||| || |||||||| ||| Sbjct 6766 ATGAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATCTTCTGCTTCACGTTC 6707 Query 38247 TGGACAGTATCTCCACTT-TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305 | || || || | || || || || | |||||||| |||||||||||||| || || Sbjct 6706 TCGATGGTGTC-CGACGACTCGACCTCGAGAGTAATAGTCTTACCCGTCAAGGTCTTGAC 6648 Query 38306 GAATATCTGCAT 38317 ||| || ||||| Sbjct 6647 GAAGATTTGCAT 6636 >seq59810 Length=127 Score = 87.8 bits (96), Expect = 1e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 || ||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 66 CTATCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 7 Query 20007 G 20007 | Sbjct 6 G 6 >seq56890 Length=127 Score = 86.0 bits (94), Expect = 4e-12 Identities = 64/75 (85%), Gaps = 5/75 (7%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||| ||||||||||||||||| | | |||||||||| || |||||||| Sbjct 75 AAGCCCGTTCCATTGGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATCTCGT 16 Query 25957 TAATCCTTTCATGCG 25971 |||||| |||||||| Sbjct 15 TAATCCATTCATGCG 1 >seq36427 Length=127 Score = 86.0 bits (94), Expect = 4e-12 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGT 20001 |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct 55 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGT 1 >seq36426 Length=64 Score = 86.0 bits (94), Expect = 4e-12 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGT 20001 |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct 55 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGT 1 >seq921 Length=66 Score = 86.0 bits (94), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 3/66 (5%) Strand=Plus/Minus Query 19957 AAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG---GTAATA 20013 ||||| ||||||| |||||||||||||||||||||||||||||||||| || | |||| Sbjct 66 AAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCGCTTGCAATA 7 Query 20014 TTTAGC 20019 |||||| Sbjct 6 TTTAGC 1 >seq59838 Length=127 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/74 (85%), Gaps = 5/74 (7%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||| |||||||||||||||||| | | |||||||||| || |||||||| Sbjct 74 AAGCCCGTTCACTTGGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATCTCGT 15 Query 25957 TAATCCTTTCATGC 25970 |||||| ||||||| Sbjct 14 TAATCCATTCATGC 1 >seq56216 Length=127 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 74 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGG 127 >seq20123 Length=66 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/62 (90%), Gaps = 3/62 (5%) Strand=Plus/Minus Query 19964 TTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG---GTAATATTTAGCC 20020 |||||| |||||||||||||||||||||||||||||||||| || | ||||||||||| Sbjct 66 TTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCGCTTGCAATATTTAGCC 7 Query 20021 TT 20022 || Sbjct 6 TT 5 >seq8937 Length=127 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/62 (90%), Gaps = 3/62 (5%) Strand=Plus/Plus Query 19964 TTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG---GTAATATTTAGCC 20020 |||||| |||||||||||||||||||||||||||||||||| || | ||||||||||| Sbjct 1 TTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCGCTTGCAATATTTAGCC 60 Query 20021 TT 20022 || Sbjct 61 TT 62 >seq5206 Length=65 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 54 CTCTCTTTTCAAAGTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGG 1 >seq26699 Length=127 Score = 82.4 bits (90), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 3/66 (5%) Strand=Plus/Minus Query 19960 GTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG---GTAATATTT 20016 || ||||||| |||||||||||||||||||||||||||||||||| || | ||||||| Sbjct 127 GTCCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCGCTTGCAATATTT 68 Query 20017 AGCCTT 20022 ||| || Sbjct 67 AGCATT 62 >seq7371 Length=127 Score = 82.4 bits (90), Expect = 5e-11 Identities = 96/128 (75%), Gaps = 4/128 (3%) Strand=Plus/Minus Query 38190 AGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGG 38249 ||||| || || || | ||||| ||| || |||||| || ||||||||||| |||| | Sbjct 126 AGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCG 67 Query 38250 ACAGTAT--CTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGA 38307 | ||| | ||| || ||||| || | |||||||| || ||||||| || || |||| Sbjct 66 ATAGTGTCGCTCGAC--TCAACCTCGAGCGTAATAGTCTTGCCCGTCAGCGTCTTGACGA 9 Query 38308 ATATCTGC 38315 | |||||| Sbjct 8 AGATCTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334624512704888