Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F000826285.1_202015-01- 07] 79,048 sequences; 66,025,675 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq79005 515 7e-141 seq71326 376 5e-99 seq68661 367 2e-96 seq77627 241 2e-58 seq4177 87.8 3e-12 >seq79005 Length=17376 Score = 515 bits (570), Expect = 7e-141 Identities = 1119/1663 (67%), Gaps = 65/1663 (4%) Strand=Plus/Plus Query 243959 GTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTG 244018 |||||||||| ||||| || || |||| | | |||||| ||| |||||||| ||| Sbjct 1 GTCTTGTAGAGCTTCTTGATGTCGTCAGGGATCTCGTCGATGCGCTGGACCGAGCCGTTG 60 Query 244019 TGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCG 244078 || || ||||| | | | | | ||| ||||| |||| | | |||| Sbjct 61 TGCTGGACGAGCTTGTTCTTGAGCTGCGGGGACCAGAGGCC---GCGCAGCTGGAGCTCG 117 Query 244079 ---ACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGG 244135 | ||||||| ||| || || || || || | || | ||||||| ||||| | Sbjct 118 CGCAACAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCAAGGATGCGGCGCGTGTAGATG 177 Query 244136 TTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTC 244195 ||| | || ||||| | || ||| ||||||| || ||||||| || |||||| Sbjct 178 TTGGTCGTGTAGGGCTCAAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTCGAGGCAGTC 237 Query 244196 GGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGC 244255 |||||||||| || ||||| ||| | | |||||| | ||| | | || Sbjct 238 GGCATGGGCGCGACGAGCAGCGAGTTGCGGAGGCCGTGGCGGGCAATGTTGGCGCGCAGA 297 Query 244256 TCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGC 244315 | |||||||||| | |||| || | || |||||| | ||| |||| Sbjct 298 GTGGTCCAGTCCCAACGGTCCGACGGGAC---------GACGCCCCAGAGGTCGGGCTGC 348 Query 244316 AGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCC 244375 ||| ||||| | | || ||| ||||||| ||||| || ||| ||||||| Sbjct 349 AGCTTGCCCTTCGAGGCCGGCGAGCCGGGGTAGGTCTCGTAGGTGCCCTCGACCTGGGCC 408 Query 244376 AGCTTACAGCTCTCGTCGAGG---GCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTC 244432 |||| | || | | | | ||||| |||||||||||||| ||||| ||| Sbjct 409 AGCTC---GTTCGAGGCCACGCAAGCGGCATAGTAGATGGTCTCAAAGATGGCGCGGTTG 465 Query 244433 ATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGT 244492 | |||||||||| | ||| | ||| | || |||||||||||||||||||| Sbjct 466 AGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGACGCAGGATCATGAAGACGTCGGCCAGG 525 Query 244493 CCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACG 244552 ||||||||||| ||||||||||| | ||| |||| ||| ||| ||| |||||||| Sbjct 526 CCCTGCACGCCAATGCCGATGGGGCGGTGGCGCTGGTTCGAGGTGCGGGCCTCGGGCACC 585 Query 244553 GGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCG 244612 ||||| ||||| ||||||||||||||||||||| ||||| | ||| ||||| Sbjct 586 GGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTTGGTGACGACCTTGACCACGTCA 645 Query 244613 GCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCG 244672 |||| ||| || ||| | | ||| ||||| |||| | Sbjct 646 AACAGCTTCTGGTGATCAAACTGGCCG------TCGACGATG------------AACTTG 687 Query 244673 TTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACA 244732 ||||||| |||||||||||| |||||||| || || | ||||||||||| Sbjct 688 GGCAGGGCGATCGAGGCCAGGTTGCACACGGCCACTTCGTCGGGCGAGGTGTACTGGATG 747 Query 244733 ATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCG 244792 | ||| ||||| ||||| ||| ||| |||||||||||||| || || |||||| | Sbjct 748 ACCTCCGTGCACAGGTTCGACGACTGGATCGTGCCCAGGTGCTGCTGGTTCGACTTGCTG 807 Query 244793 TTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-C 244851 |||||||||||||||||||||||| ||||| || ||||||| ||| | |||||| | Sbjct 808 TTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCCAGTCTCGATCTGCGACTCGAGGATC 867 Query 244852 GCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCG 244911 || |||||| ||| ||||||||| || ||| || |||||| ||||||||| Sbjct 868 GC-AAACCAGAGCTCCTGGGCCTTGACCACCCGGCGGGCGCGGCCCTCCAGCTCGTAGCG 926 Query 244912 GGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACG-CCG 244970 ||| | || ||||| |||||| || ||||| |||| | || | Sbjct 927 CTCATACTTCTCTTCAAACTCCTTGCCCCACGAGTCAAACAGGCC-GGGCGCCTCGTTGG 985 Query 244971 GGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCC 245030 |||| | ||| ||| |||||||| || ||| | || |||||||||||||||||||| Sbjct 986 GGCAGAAGAGCGACCAGTCGCCGCCAGACTCGACGCGCTTCATGAAGAGGTCGGGGATCC 1045 Query 245031 AGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCT 245090 | ||| | | ||||||||| | | | | ||| ||| ||| ||||||| | |||| Sbjct 1046 ACAGGCCGTAGAAGAGGTCGCGAGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTGAGCT 1105 Query 245091 CCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCC 245150 ||||||||||||||| |||| ||||||| ||||| | |||| || | |||||| | Sbjct 1106 CCAAAAAGTCAAAGATGTCGGCGTGCCACGGCTCGAGATAGATGGCAAAGGCGCCCTTGC 1165 Query 245151 GCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTA 245206 ||||| ||| |||||||| | | | || ||| ||||| ||| |||||| | Sbjct 1166 GCTTGCCGCCGCCCTGGTCGA----CGTAGCGGGCGGTGTCGTTGTAGACGCGCAGCATC 1221 Query 245207 GGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG 245266 || || | ||||| ||| |||||||||||| ||||| | | ||| | || Sbjct 1222 GGGACGAGACCGTTCGAGGTGCCGTTGGTGCCGCGAATGTACGAG---TTGGAGGCGCGG 1278 Query 245267 TTGCTGATGGAC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322 ||| | ||| | | ||| | ||||| || |||||||||||||||||| ||| Sbjct 1279 ATGC-GGTGGGCAGCGACGCCGATACCGCCAGCTGACTTGGAGATGAGGGCGCACTGCTT 1337 Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382 || ||||| || ||||| || |||| ||||||| |||| || ||||| || || Sbjct 1338 GAGCGTGTCGTAGATACCCTCGATCGAGTCCTCCTTCATGGTGAGGAGGAAGCACGACGA 1397 Query 245383 CAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCG 245442 ||||| || |||| ||| | |||||| || || || |||||||||| ||| ||| Sbjct 1398 AAGCTGCGGGCGGGGGGTGCCGGCGTTGAAGAGGGTCGGTGTGGCGTGGGTGAAG-AGCT 1456 Query 245443 GCT-CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCA 245501 | | |||||| || |||| |||| || | ||| ||||||||| ||| | | Sbjct 1457 GTTGCGAGAGCAAGTCGTAGGTCTCGATGACGGCGGGGATGTTGTCCATGTGAAGACCGA 1516 Query 245502 GGGCGCACCTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCG--GGTCCCTTGAG 245559 ||| | |||||| |||||||||| ||||| | ||| | ||| || Sbjct 1517 CGGCAACACGCATGAGCATGTGCTGGGGGCGCTCGACGATCTTGTCGTCGATCC--GGAA 1574 Query 245560 CATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAG 245602 | ||| || |||||||| ||||| || || ||||||| |||| Sbjct 1575 GAGGTAAGACCGCTCGAGGGTCTTAAATCCGAAGTACGTGTAG 1617 >seq71326 Length=3810 Score = 376 bits (416), Expect = 5e-99 Identities = 604/859 (70%), Gaps = 18/859 (2%) Strand=Plus/Plus Query 42292 ACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGA 42351 ||||| ||| ||| |||||||||||||| || ||| |||||||||||||||| Sbjct 1732 ACCAGCGCATTTGGGAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGG 1791 Query 42352 TTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCC 42411 | || || | |||| | ||||| || || | |||| ||| ||| Sbjct 1792 TCGATTTGAGCGCCGACATGAAGCACTGGGCTTCGCTCAACAACGACGAGAAGCACTTCA 1851 Query 42412 TCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCA 42471 |||| || | |||||||||||||||||| || ||||| ||| ||||||||||| Sbjct 1852 TCAAGCACGTGCTGGCCTTCTTCGCCGCCAGCGATGGCATCGTCGCCGAGAACCTGGCTG 1911 Query 42472 CCAGGTTCATGAAAGAGGTGC-AGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| || |||| ||| | ||||||||||||||||||||||||||||| Sbjct 1912 GCCGCTTCATGAAGGAAGTGCAAGTGC-CCGAGGCGCGCTGCTTCTACGGCTTCCAGATC 1970 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 || || |||||| | ||||| || ||||| | || || |||| ||| | ||| Sbjct 1971 GCTATCGAGAACATCCACTCGGAAATGTACTCGCTCCTCATCGACACCTACGTTAAAGAT 2030 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 || ||||| || || ||| |||||||||||| |||||| | ||||||||| Sbjct 2031 CCGATCGAGAAGGACCACCTCTTCCGGGCCATGGAGACTGTGCCCTCGGTGAAGAAGAAG 2090 Query 42651 GCGGACTGGGCGCTCAACTGGAT------CGAGAGTCCCGACGCAACGTTCGGCGAGAGG 42704 || || ||||| | |||||| ||| || | || || ||| |||| | Sbjct 2091 GCCGAGTGGGCCATGCGCTGGATTTGCAAGGAGGGT---GTCGAGACCTTCCCCGAGCGT 2147 Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || | | ||| |||| |||||||||||||||||||| ||| | ||| |||||||||| Sbjct 2148 CTCATCGGCTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGCTCTTTCTGCTCCATCTTC 2207 Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 ||||||||| || | ||||||||| || ||||| ||||| || |||||| | Sbjct 2208 TGGCTCAAGAAGCGCGGCCTGATGCCCGGTCTTGCCTTCAGCAACGAGCTTATCAGCCGC 2267 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884 |||||||| ||||| | |||||||| |||||||| | | | | ||| ||||| Sbjct 2268 GACGAGGGTCTGCACTGCGACTTTGCTTGCCTCCTCTACGGCATGCTGGTCA---ACAAG 2324 Query 42885 CCCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943 ||||||| || || | || || ||| || ||||| || ||||||||||||||||| Sbjct 2325 CCCTCGACCGA-CGTGCCCAAGCAGATCGTCCTTGAGGCTGTCGAGATCGAGAAGGAGTT 2383 Query 42944 CCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTA 43003 | ||||| | |||||||||||| | || | ||||||||| | ||||||||||| |||| Sbjct 2384 CGTCACGGAATCGCTGCCCGTGGCTCTTATTGGCATGAACGCCAACCTCATGTGCCAGTA 2443 Query 43004 CATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACA 43062 |||| ||| ||||||||||| || || || | || | | | | | ||||||| Sbjct 2444 CATCGAGTTCGTCGCCGACCGGCTTCTCGTCGCTCTCGGCTGTGA-CAAGCACTACAACT 2502 Query 43063 CGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCG 43122 | | ||| ||| | |||||| || ||| | || |||||||||||||| |||| Sbjct 2503 CATCCAACCCGTTCCCGTGGATGGAGCTTATTTCGCTTGAAGGCAAGACCAACTTCTTCG 2562 Query 43123 AGAAGCGCGTCGCCGACTA 43141 | ||||| | ||| || Sbjct 2563 AACGCCGCGTTGGCGAGTA 2581 >seq68661 Length=10605 Score = 367 bits (406), Expect = 2e-96 Identities = 531/739 (72%), Gaps = 14/739 (2%) Strand=Plus/Minus Query 42292 ACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGA 42351 ||||| ||||||| |||||||||||||| || |||| |||||| ||||||||| Sbjct 2812 ACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACAGCCGAGGAGG 2753 Query 42352 TTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCC 42411 | || || | | | |||| | |||| | || || || | ||||| || ||| Sbjct 2752 TCGATCTCGGCGACGACATGAAGCACTGGCAATCTCTCTCAGCTGACGAACAGCACTTCA 2693 Query 42412 TCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCA 42471 |||| || | ||||| ||||| ||||| |||||||| || |||||| ||||| Sbjct 2692 TCAAGCACGTTCTGGCATTCTTTGCCGCTAGCGACGGCATTGTGGCGGAGAACTTGGCCG 2633 Query 42472 CCAGGTTCATGAAAGAGGTGCA-GTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | ||||||||||||||||| || | ||||| || |||||||| |||||||| || Sbjct 2632 GTCGCTTCATGAAAGAGGTGCAAGTGCCC-GAGGCACGATGCTTCTATGGCTTCCAAATC 2574 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||| | || || | || ||| || ||| Sbjct 2573 GCCATCGAGAACATCCACTCAGAGACCTACTCGCTCCTCCTGGATACCTACGTCAAGGAC 2514 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 ||||||||| | || ||||| ||||| || ||| |||||| | ||||||||| Sbjct 2513 CCCGTCGAGAAGGCCCATCTCTTCAATGCCATCGAAACGGTGCCCTCGGTGAAGAAGAAG 2454 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || || |||||| | |||||| | ||| || | || || | |||| | || Sbjct 2453 GCCGAGTGGGCGATGCGATGGATCAACAAGGAG-GGCGTTGACACCTTTGCCGAGCGCCT 2395 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | ||| |||| |||||||||||||||||||||||| ||||| ||||||||||| Sbjct 2394 CGTTGGGTTTGCCGCAGTCGAGGGCATCTTCTTCTCGGGCTCCTTCTGTTCCATCTTCTG 2335 Query 42767 GCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| | | | ||| |||||||| ||| ||||||| ||||| ||||||||| | | Sbjct 2334 GCTCAAG-AAACGCGGTCTCATGCCCGGCCTCGCCTTCTCCAACGAGCTCATCAGCCGCG 2276 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 ||||||| ||||| || |||||||||||| ||| | | || | |||||| Sbjct 2275 ACGAGGGCCTGCACGCCGAGTTTGCCTGCCTCTTGTAC---GGTATGCTTGTGAACAAGC 2219 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 | |||| || || | | ||| ||| || |||||||| ||||||||||||||||| Sbjct 2218 CGTCGAGCGA-CGTGCCAAGGCAGATCGTCCTCGAGGCCGTCGAGATCGAGAAGGAGTTT 2160 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 ||||| |||| || || ||| | || ||||||||||| | |||||||||| ||||| Sbjct 2159 GTCACGGAGTCACTCCCGGTGGCGCTCATCGGCATGAACGCAGGCCTCATGTGCCAGTAC 2100 Query 43005 ATCCAGTACGTCGCCGACC 43023 ||| ||| | |||||||| Sbjct 2099 ATCGAGTTTGCCGCCGACC 2081 Score = 145 bits (160), Expect = 1e-29 Identities = 186/257 (72%), Gaps = 12/257 (5%) Strand=Plus/Minus Query 243763 GGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTG 243822 ||||||||| | ||||||||||||||||||||||| || || ||| |||| || ||| Sbjct 1146 GGCCTTGGTGCGGAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAAGCGTAGAAGTG 1087 Query 243823 CATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAG 243882 ||| | ||||||||| | || |||||| || | ||||||||| Sbjct 1086 CATTGACGTCAGCTTGGGGAAGGTG------GGGTCGGCCATGTG------GAGGTTGAG 1039 Query 243883 GGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTG 243942 |||||||||||||||| | ||| || || || || |||||| ||||| | | ||| Sbjct 1038 CGACTGGCTCTGGTCGATGTAGGCCGAGCGGTCGGCAGCCATGTCGATGATGACGCGCTG 979 Query 243943 AGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTT 244002 || ||||| || | |||||||||| || |||||||| | |||| | |||||||| Sbjct 978 TGAGATCTCCCACACGGTCTTGTAGAGGGCCTTGAGGTCCGGAGGGATCTTGTCGATGTT 919 Query 244003 CTGCACCGAGCCCTTGT 244019 |||||| ||||| |||| Sbjct 918 CTGCACGGAGCCGTTGT 902 >seq77627 Length=171561 Score = 241 bits (266), Expect = 2e-58 Identities = 581/869 (67%), Gaps = 34/869 (4%) Strand=Plus/Plus Query 243735 CCACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCT 243794 ||||| ||| |||| ||| | | ||||||||| | ||||||||||||||||||| Sbjct 143677 CCACGGTGACCTGGTCGGCCTGGGCCTTGGCCTTGGTGCGGAGGTAGTACATGCCGGTCT 143736 Query 243795 TGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTG 243854 |||| || || |||||||| || |||||||| ||| ||||| | || | Sbjct 143737 TGAGGCCCTTGCGCCAGGCGTAGAAGTGCATGGACGTGAGCTTGGGGAAGGTG------G 143790 Query 243855 GGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCT 243914 | ||| || | |||||| || |||||||||||||| | | ||| || || | Sbjct 143791 GATCGGCCATGTG------GAGGTTCAGCGACTGGCTCTGGTCAATGTAGGCCGAGCGGT 143844 Query 243915 CTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCT 243974 | ||||| | | ||||| | | ||| || ||||| || | |||||||||| || || Sbjct 143845 CGGCGGCTAGGTCGATGATGACGCGCTGCGAGATCTCCCACACGGTCTTGTAGAGGGCCT 143904 Query 243975 TGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG- 244033 |||| | | |||| | | |||||| |||||| ||||| || | |||||| ||| Sbjct 143905 TGAGATCTTGCGGGATCTCGTCGATGCCCTGCACGGAGCCGTTATTCCCGATGA--TGGC 143962 Query 244034 GTGCG-CATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCG-ACCAGGTGCCTGT 244091 || | ||| || ||| ||| || || || || | | || || ||||| || Sbjct 143963 GTTCTTCATCTTCTCGGACCAGAGCCCTCTCTGCATGAG-GTCGCGCACGAGGTGTGGGT 144021 Query 244092 TCACCACC-TGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGC 244150 | |||||| ||||| || || |||||| ||||| ||||| |||| | || || Sbjct 144022 TGACCACCATGAAA-TCGCCTCCGAGCACGATGCGCTTGTAGATGTTGGTCGTGTAGGGT 144080 Query 244151 TCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACC 244210 |||| ||| ||| || || ||||||| ||| || || ||||| |||| |||| Sbjct 144081 TCGAACGCCTCGCAGTTACCGAGGATCTGCGACGTCGAAGCGGTGGGCATCGGCGCCACC 144140 Query 244211 AGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCAC 244270 |||||| || |||||||| || |||| | | || || |||||||||| Sbjct 144141 AGCAGAGAATTGTAGACGCCGTGGAGCTTGATGTTGGCACGAAGTGCGGCCCAGTCCCAC 144200 Query 244271 ATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTG 244330 || | || | | || |||||||||||| ||| || | ||| | | Sbjct 144201 ATATCGGACGGAAC---------GACGCCCCACATGTCCGGCTGAAGGACGCCCCGGGAG 144251 Query 244331 ACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTG---GGCCAGCTTACAGCTC 244387 ||||| ||| |||||||| ||| | | | || ||| ||||| || | Sbjct 144252 ACGGGCGAACCCGCGTAGGTCTCGTACGTCCGGCCGAGCTCCTTGGCCATCTCGTTGGAT 144311 Query 244388 TCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTG 244447 | ||||||| ||||| || ||||||||||||||| | || | |||||| || ||| Sbjct 144312 GCCTCGAGGGAGGCGTGGTGGATGGTCTCGAAGATGAGGCGATTGAGGTCGCGTGC-TTG 144370 Query 244448 CCGCAGGTGA-AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGAT 244506 | | || | ||| | ||| | ||||||||| || || || |||||||||||||| Sbjct 144371 CTGGCTGTCCCACGGGTAACGCATGAGCATGAAGACATCCGCTAGACCCTGCACGCCGAT 144430 Query 244507 GCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCC 244566 |||||||| ||||| ||| |||| ||| | ||| ||||| | ||||| |||||| Sbjct 144431 CCCGATGGGCCTGTGGCGCATGTTCGAGTGTCGGGCCTCGGGGATCGGGTAGTGGTTGCC 144490 Query 244567 GTCGATCACCTTGTTGAGGTTGCGGGTGA 244595 |||||| || ||||||| ||||||| Sbjct 144491 GTCGATGACTCGGTTGAGGCCTCGGGTGA 144519 Score = 190 bits (210), Expect = 4e-43 Identities = 246/337 (73%), Gaps = 11/337 (3%) Strand=Plus/Plus Query 42510 TGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTG 42569 ||||||||||||||||| || ||||| |||||| | ||||| ||| ||| | || Sbjct 136706 TGCTTCTACGGCTTCCAAATTGCCATCGAGAACATCCACTCGGAGACCTACTCGCTCCTC 136765 Query 42570 CTCAACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACG 42629 || |||| ||| || ||| || || || | || || || ||||| ||||| Sbjct 136766 CTGGACACCTACGTCAAGGACCCTGTAGAAAAAGCCCATCTCTTTAACGCCATCAAGACG 136825 Query 42630 ATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATC------GAGAGTCCC 42683 |||||| ||||||||||||| || ||||| | |||||| ||| ||| | Sbjct 136826 GTGCCCTCGGTCAAGAAGAAGGCCGAGTGGGCAATGCGGTGGATCAACAAGGAGGGTCTC 136885 Query 42684 GACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCG 42743 ||| || || | |||| | || || | || ||||||||||||| |||||||||||| Sbjct 136886 GAC---ACCTTTGCCGAGCGTCTCGTCGGATTCGCCGCCGTCGAGGGTATCTTCTTCTCG 136942 Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTT 42802 ||| ||||| |||||||||||||||||| | | | ||| |||||||| ||| |||| Sbjct 136943 GGCTCCTTCTGTTCCATCTTCTGGCTCAAG-AAACGCGGTCTCATGCCCGGCCTCGCCTT 137001 Query 42803 CTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839 ||| ||||| ||||||||| | |||||||| |||||| Sbjct 137002 CTCCAACGAGCTCATCAGCCGCGACGAGGGCCTGCAT 137038 Score = 154 bits (170), Expect = 3e-32 Identities = 208/284 (73%), Gaps = 7/284 (2%) Strand=Plus/Plus Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTC 42902 || |||||||||||||||| | || ||| | ||||||| |||| || || | | Sbjct 138629 GAGTTTGCCTGCCTCCTGTAC---AGTATGCTCGTGAACAAGCCGTCGAGCGA-CGTGCC 138684 Query 42903 CGGGCC-ATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 | || ||| || |||||||| ||||||||||||||||| ||||| ||||||| || Sbjct 138685 CAAGCAGATCGTCCTCGAGGCCGTCGAGATCGAGAAGGAGTTTGTCACGGAGTCGCTCCC 138744 Query 42962 CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGA 43021 ||| | || |||| |||||| | |||||||||| ||||||| ||| |||||||| Sbjct 138745 GGTGGCGCTCATCGGTATGAACGCGGGCCTCATGTGCCAGTACATTGAGTTTGTCGCCGA 138804 Query 43022 CCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACT 43080 || ||| || ||| || ||||| | | | ||||||| | || ||||||| || Sbjct 138805 CCGTCTGCTCGTGGCACTTGGGT-GCGACAAACACTACAACGCCACGAACCCCTTCCCCT 138863 Query 43081 TTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124 |||||| ||||| | ||||||||||||||||| |||||| Sbjct 138864 GGATGGAGCTGATCTCACTCGAGGGCAAGACCAACTTCTTCGAG 138907 Score = 143 bits (158), Expect = 5e-29 Identities = 273/395 (69%), Gaps = 8/395 (2%) Strand=Plus/Plus Query 244755 ACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCA 244814 ||| ||||||||| ||||||||||| || ||| ||||||| |||||||| ||||||| Sbjct 144729 ACTGGATGGTGCCAAGGTGCTGGTGGTTACTTTTGCCGTTGCATGCGTCCTTATAGAGCA 144788 Query 244815 TGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGCC 244873 | ||||| |||||||||| || | |||||| ||| | ||| || ||| ||| Sbjct 144789 TATAGGGCGTGCCGGTCTCGACTTGTGACTCGAGGATCGC-GAACCACAGCTCCTGTGCC 144847 Query 244874 TTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCG 244933 |||| || | || || ||| || ||| || ||| |||| || ||||||||| | Sbjct 144848 TTGATGGTGCGTCGGGCGCGGCCTTCCCGCTCATATCGGATGTAGAGTTCCTCGAACTGG 144907 Query 244934 GGGCCCCAGACCTCGTCTAG-GCCGGGGCACGACGCCGG--GCACATGAGACTCCACTCG 244990 ||||| || || | || |||| || | || | ||| | || ||| | | Sbjct 144908 TCTCCCCAAACGTCCTGAAGACCCGGTGCTTCATTGGGGTCGAACA-GCGA--CCAGTAG 144964 Query 244991 CCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCC 245050 || || ||| ||| | || |||||| || || |||| ||| ||||| | ||||||||| Sbjct 144965 CCACCAGCCTCGACGCGCTTCATGAATAGATCCGGGACCCACAGGGCGTAGAAGAGGTCG 145024 Query 245051 CTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCG 245110 | | | | ||| ||| ||| ||||||| | || || | || ||||||| ||| Sbjct 145025 CGAGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTGAGATCGAGGAACTCAAAGATGTCC 145084 Query 245111 ACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCC 245145 ||||||||||||| ||||| |||| ||| || Sbjct 145085 GAATGCCAGGGCTCCAGGTAGATCGCGAAGGCTCC 145119 Score = 89.7 bits (98), Expect = 1e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 42292 ACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGA 42351 ||||| ||| ||| |||||||||||||| || |||| |||||||||||||||| Sbjct 136415 ACCAGCGCATTTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGG 136474 Query 42352 TTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCC 42411 | || || | | |||| | |||| | || || | | ||||| | ||| Sbjct 136475 TCGATCTCGGTGACGACATGAAGCACTGGCAATCTCTCACGGCCGACGAACGGCACTTCA 136534 Query 42412 TCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCA 42471 |||| || | ||||| ||||| ||||| |||||||| || | ||||||||||| Sbjct 136535 TCAAGCACGTTCTGGCATTCTTTGCCGCTAGCGACGGCATCGTGACAGAGAACCTGGCGG 136594 Query 42472 CCAGGTTCATGAAAGAGGTGCA 42493 | ||||||||||||||||| Sbjct 136595 GTCGCTTCATGAAAGAGGTGCA 136616 >seq4177 Length=147 Score = 87.8 bits (96), Expect = 3e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 245077 GTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGC 245136 ||||||| | ||||||||||||||||||| |||| ||||||| ||||| | ||||| || Sbjct 135 GTTCTTCTTGAGCTCCAAAAAGTCAAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGC 76 Query 245137 GAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC 245172 | |||||| |||||| ||| |||||||| || Sbjct 75 AAAGGCGCCCTTGCGCTTGCCGCCGCCCTGGTCGAC 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943406098436480