Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F000826285.1_202015-01- 07] 79,048 sequences; 66,025,675 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq79005 307 2e-78 seq71326 271 1e-67 seq68661 208 1e-48 seq77627 116 7e-21 seq4177 91.5 3e-13 >seq79005 Length=17376 Score = 307 bits (340), Expect = 2e-78 Identities = 982/1502 (65%), Gaps = 77/1502 (5%) Strand=Plus/Plus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||| | ||| | ||||||||||| | || ||||||||| || || ||||| | || Sbjct 171 GTAGATGTTGGTCGTGTAGGGCTCAAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTCGA 230 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGA-GGC 213066 ||| || |||||||| || || || || ||| | | ||||| | | ||| ||| Sbjct 231 GGCAGTCGGCATGGGCGCGACGAGCAGCGAGTTGCGGAGGCCGTGGCGGGCAATGTTGGC 290 Query 213067 GCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGT 213126 || | || | ||||||||| | | | ||| || | || || || | || Sbjct 291 GC-GCAGAGTGGTCCAGTCCCAACGGTCCGACGGGACGACGCCC---------CAGAGGT 340 Query 213127 CAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCT 213186 | ||||| |||| || | || ||| |||| | ||||| ||| | Sbjct 341 CGGGCTGCAGCTTGCCCTTCGAGGCCGGCGAGCCGGGGTAGGTCTCGTAGGTGCCCTCGA 400 Query 213187 CCTTGGCCAGCTCGCAGGACGCCT-GCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCC 213245 ||| |||||||||| || ||| ||| | | || ||||||||||| ||||| || | Sbjct 401 CCTGGGCCAGCTCGTTCGAGGCCACGCAAG-CGGCATAGTAGATGGTCTCAAAGATGGCG 459 Query 213246 CTGTTGAGCTTCTTGGCCTCTGGGG------ACGTGAAGGGCATCATCATGCGTTGGAAC 213299 | |||||||| |||||| | ||| | ||| |||||| || Sbjct 460 CGGTTGAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGACGCAGGATCATG------AAG 513 Query 213300 ACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAG 213359 || || ||||| ||||| || || ||||||||||| | ||| | | |||| || || | Sbjct 514 ACGTCGGCCAGGCCCTGCACGCCAATGCCGATGGGGCGGTGGCGCTGGTTCGAGGTGCGG 573 Query 213360 CACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACT 213419 ||| || ||||| ||||| |||||| | |||||||||||| |||| | || Sbjct 574 GCCTCGGGCACCGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTTGGTGACGACC 633 Query 213420 TTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCA 213479 ||| || | ||| | || ||||| ||| | ||||| | |||| Sbjct 634 TTGACCACGTCAAACAGCTTCTGGTGATCAAACTGG------CCGTCGACGATGAACTTG 687 Query 213480 GGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT---GAGAGTCTGTGTACTCC 213536 ||||||||||| |||||||||||| |||||||| || | | ||| ||||||| Sbjct 688 GGCAGGGCGATCGAGGCCAGGTTGCACACGGCCACTTCGTCGGGCGAG---GTGTACTGG 744 Query 213537 ATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTT 213596 |||| ||| ||||||||||| | |||| |||||||||| ||| ||||| ||||| Sbjct 745 ATGACCTCCGTGCACAGGTTCGACGACTGGATCGTGCCCAGGTGCTGCTGGTTCGACTTG 804 Query 213597 GCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGT 213656 |||| | |||||||||||||||||||| | || ||||| | ||| ||| | || Sbjct 805 CTGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCCAGTCTCGATCTGCGACTCGAGG 864 Query 213657 ATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGT--AGCCT 213714 ||| |||||| | | ||||||||||||||| | | | ||| | | || || Sbjct 865 ATCGCAAACCAGAGCTCCTGGGCCTTGACCACCCGGCGGGC----GCGGCCCTCCAG-CT 919 Query 213715 CGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTC---CAGTCCCG--G 213769 |||| | || || ||| | || || | |||||| | ||| ||| || | | Sbjct 920 CGTAGCGCTCATACTTCTCTTCAAACTCCTTGCCCCA---CGAGTCAAACAGGCCGGGCG 976 Query 213770 ACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCA-TCTCTGACTCTCTGCATGAACA 213828 | | | ||| || | ||| |||||| ||| || ||| ||| | || |||||| | Sbjct 977 CCTCGTT--GGGGCAGAAGAGCGACCAGTCGCCGCCAGACTC-GACGCGCTTCATGAAGA 1033 Query 213829 GGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGT 213888 |||| |||| |||||| || ||| ||||| | | | |||| ||| || || Sbjct 1034 GGTCGGGGATCCACAGGCCGTAGAAGAGGTCGCGAGCGCGGTTCTCCTCCTTGCCGTGGT 1093 Query 213889 TTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAA 213948 | || || || | ||||||||||||||| |||||||||||||| | |||||||||| Sbjct 1094 TCTTCTTGAGCTCCAAAAAGTCAAAGATGTCGGCGTGCCACGGCTCGAGATAGATGGCAA 1153 Query 213949 AGGCGCCCGGCCTCTT---GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGC 214005 |||||||| | ||| |||||||||||| || | ||| |||| ||| || Sbjct 1154 AGGCGCCCTTGCGCTTGCCGCCGCCCTGGTCGACGTAGCGGGCGGTGTCGTTGTAGACGC 1213 Query 214006 GCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGG 214065 |||| | || || || ||||| || |||||||| || || |||||| ||||| Sbjct 1214 GCAGCATCGGGACGAGACCGTTCGAGGTGCCGTTGGTGCCGCGAATGTACGAGTTGGAGG 1273 Query 214066 CCCTCAGGTTGCTCATGGAGAGC----CCTATGCCACCGGCGTACTTGGAGATCATGGCG 214121 | | || ||| ||| ||| || || || || || |||||||||| | |||| Sbjct 1274 CGC---GGATGC-GGTGGGCAGCGACGCCGATACCGCCAGCTGACTTGGAGATGAGGGCG 1329 Query 214122 CAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAG 214181 || || | | || || ||| || | || ||| || | | | | || | |||| Sbjct 1330 CACTGCTTGAGCGTGTCGTAGATACCCTCGATCGAGTCCTCCTTCATGGTGAGGAGGAAG 1389 Query 214182 CAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATC 214241 || ||| ||||| || | || | ||| | |||||| || || || |||| ||| | Sbjct 1390 CACGACGAAAGCTGCGGGCGGGGGGTGCCGGCGTTGAAGAGGGTCGGTGTGGCGTGGGTG 1449 Query 214242 ATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTG- 214300 | | || | ||||| | ||||||||| | ||| | |||||||| || | |||| Sbjct 1450 AAGAGCTGTTGCGAGAGCAAGTCGTAGGTCTCGATGACGGCGGGGATGTTGTCCATGTGA 1509 Query 214301 -GATCTGTAGAGCGCA--CCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCT-TTGG 214356 || | || ||| | ||| |||||||||||||| | ||| | | || | | | Sbjct 1510 AGACC----GACGGCAACACGCATGAGCATGTGCTGGGGGCGCTCGA-CGATCTTGTCGT 1564 Query 214357 GGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAGGTATGAT 214416 | | || ||||| || ||||| || ||||| || || ||||| | |||| | | || Sbjct 1565 CGATCCGGAAGAGGTAAGACCGCTCGAGGGTCTTAAATCCGAAGTACGTGTAGTTGTAAT 1624 Query 214417 CG 214418 || Sbjct 1625 CG 1626 >seq71326 Length=3810 Score = 271 bits (300), Expect = 1e-67 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Minus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| || || | ||| || |||||| | |||| ||||||| | Sbjct 2563 TCGAAGAAGTTGGTCTTGCCTTCAAGCGAAATAAGCTCCATCCACGGGAACGGGTTGGAT 2504 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 | ||| || | ||||| ||| | | || || | || |||||| ||||||| Sbjct 2503 GAGTTGTAGTGCT-TGTCACAGCCGAGAGCGACGAGAAGCCGGTCGGCGACGAACTCGAT 2445 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| || ||||||||| || || | |||||||| | | |||| Sbjct 2444 GTACTGGCACATGAGGTTGGCGTTCATGCCAATAAGAGCCACGGGCAGCGATTCCGTGAC 2385 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTA---ACGCGGGACTCTGA 48096 ||||||||||| |||| || || || || |||||||| ||| || | || Sbjct 2384 GAACTCCTTCTCGATCTCGACAGCCTCAAGGACGATCTGCTTGGGCACGTCGGTC---GA 2328 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| ||| | || | ||||| | ||| |||||||| | ||||| || || Sbjct 2327 GGGCTTGTTGACCAG---CATGCCGTAGAGGAGGCAAGCAAAGTCGCAGTGCAGACCCTC 2271 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 ||| |||||||| ||| ||||| |||| ||||| ||||| | || | || ||||| Sbjct 2270 GTCGCGGCTGATAAGCTCGTTGCTGAAGGCAAGACCGGGCATCAGGCCGCGCTTCTTGAG 2211 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||||||||| ||||||||||||||||| || || ||||| || | Sbjct 2210 CCAGAAGATGGAGCAGAAAGAGCCGGAGAAGAAGATGCCCTCGACCGCGGCGAAGCCGAT 2151 Query 48277 GAGCCTCTCTCCGAAAG------AAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| ||| | | | | |||| | |||||| | ||||| || Sbjct 2150 GAGACGCTCGGGGAAGGTCTCGACACCCTCCTTG---CAAATCCAGCGCATGGCCCACTC 2094 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACC 48390 ||||||||||| | | |||| ||||| |||||||||||||| | | ||| Sbjct 2093 GGCCTTCTTCTTCACCGAGGGCACAGTCTCCATGGCCCGGAAGAGGTGGTCCTTCTCGAT 2034 Query 48391 TGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | || ||| ||||| |||| ||| | |||||| || ||||| | ||||| Sbjct 2033 CGGATCTTTAACGTAGGTGTCGATGAGGAGC---GAGTACATTTCCGAGTGGATGTTCTC 1977 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 |||||||||||||| ||||||||| | ||||| ||| |||||||| | ||| Sbjct 1976 GATAGCGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGGCACTTGCACTTCCTTCATGAA 1917 Query 48508 TCTCTCCAG-CAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | |||| ||| ||||| ||| || ||||| || || |||||||| || || | Sbjct 1916 GC-GGCCAGCCAGGTTCTCGGCGACGATGCCATCGCTGGCGGCGAAGAAGGCCAGCACGT 1858 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || ||||| || | |||| | | |||| || | ||| || || Sbjct 1857 GCTTGATGAAGTGCTTCTCGTCGTTGTTGAGCGAAGCCCAGTGCTTCATGTCGGCGCTCA 1798 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 || || || || | |||||||| || || || || |||||||| |||| ||| Sbjct 1797 AATCGACCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACATCTCCCAAATG 1739 >seq68661 Length=10605 Score = 208 bits (230), Expect = 1e-48 Identities = 484/723 (67%), Gaps = 20/723 (3%) Strand=Plus/Plus Query 47973 ACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCT 48032 |||||||||| | |||||||| ||||||||| ||||| | ||| || | | || Sbjct 2093 ACTCGATGTACTGGCACATGAGGCCTGCGTTCATGCCGATGAGCGCCACCGGGAGTGACT 2152 Query 48033 TTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGC-TTAACGCGGGAC 48091 |||| |||||||||||| |||| ||||| || || |||||| || | || | Sbjct 2153 CCGTGACAAACTCCTTCTCGATCTCGACGGCCTCGAGGACGATCTGCCTTGGCACGTCGC 2212 Query 48092 TCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAG 48151 || || || ||||| || || | | || | | ||||||||| || ||||| | Sbjct 2213 TC-GACGGCTTGTT---CACAAGCATACCGTACAAGAGGCAGGCAAACTCGGCGTGCAGG 2268 Query 48152 CCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGT 48211 || ||||| |||||||||||| ||||||||||| ||| || ||||||| || | | Sbjct 2269 CCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGCGAGGCCGGGCATGAGACCGCGTTTC 2328 Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271 ||||||||||| || | ||| ||||| ||||||||||||||||| ||||| || ||| Sbjct 2329 TTGAGCCAGAAGATGGAACAGAAGGAGCCCGAGAAGAAGATGCCCTCGACTGCGGCAAAC 2388 Query 48272 GCGGTGAGCCTCTCTCCGAAAG----AA--GCGTTCTTGTCTGAGATCCAGGAAAGCGCC 48325 | ||| | ||| | || | || | | ||||| |||||| | |||| Sbjct 2389 CCAACGAGGCGCTCGGCAAAGGTGTCAACGCCCTCCTTGT---TGATCCATCGCATCGCC 2445 Query 48326 CAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT---TCTTG 48382 || || ||||||||||| | | |||| ||| || ||||| |||||| | ||| Sbjct 2446 CACTCGGCCTTCTTCTTCACCGAGGGCACCGTTTCGATGGCATTGAAGAGATGGGCCTT- 2504 Query 48383 CACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACA 48442 ||| | | |||| || |||||| || || | ||| |||| ||||| | Sbjct 2505 --CTCGACGGGGTCCTTGACGTAGGTATCCAGGAGGAGCGAGTAGGTCTCTGAGTGGATG 2562 Query 48443 TTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTG 48502 ||||| || ||||| ||||| || |||||| | ||||| ||| ||||| ||| | Sbjct 2563 TTCTCGATGGCGATTTGGAAGCCATAGAAGCATCGTGCCTCGGGCACTTGCACCTCTTTC 2622 Query 48503 GAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGG 48562 ||| | | || ||||| || || || || ||| |||||||| || || Sbjct 2623 ATGAAGCGACCGGCCAAGTTCTCCGCCACAATGCCGTCGCTAGCGGCAAAGAATGCCAGA 2682 Query 48563 ACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTG 48622 || || || | ||| || | |||| | ||||| | |||| || | ||| | | Sbjct 2683 ACGTGCTTGATGAAGTGCTGTTCGTCAGCTGAGAGAGATTGCCAGTGCTTCATGTCGTCG 2742 Query 48623 CCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCAT 48682 || || || || || || | ||||||||||| || || || |||||||| |||| Sbjct 2743 CCGAGATCGACCTCCTCGGCTGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAG 2802 Query 48683 ATG 48685 ||| Sbjct 2803 ATG 2805 Score = 120 bits (132), Expect = 6e-22 Identities = 179/254 (70%), Gaps = 15/254 (6%) Strand=Plus/Minus Query 212580 GCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATGTGC 212639 ||||||||||| || ||||||||||||||||| |||||||||| ||| ||| | |||| Sbjct 1145 GCCTTGGTGCGGAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAAGCGTAGAAGTGC 1086 Query 212640 ATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAGGTTC 212699 |||| || || || | || | |||| || |||| ||||| Sbjct 1085 ATTGACGTCAGCTT-----GGGGAAGGTGG-GGTCGGCCATGTGG---------AGGTTG 1041 Query 212700 AGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTC 212759 || ||||| |||||||| ||| | | | | ||| || |||||||| ||||| | | | Sbjct 1040 AGCGACTGGCTCTGGTCGATGTAGGCCGAGCGGTCGGCAGCCATGTCGATGATGACGCGC 981 Query 212760 TGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATG 212819 || |||| |||||||||||||||| ||| | ||||||||| |||| | |||| Sbjct 980 TGTGAGATCTCCCACACGGTCTTGTAGAGGGCCTTGAGGTCCGGAGGGATCTTGTCGATG 921 Query 212820 TTCTGCACAGACCC 212833 |||||||| || || Sbjct 920 TTCTGCACGGAGCC 907 >seq77627 Length=171561 Score = 116 bits (128), Expect = 7e-21 Identities = 232/339 (68%), Gaps = 21/339 (6%) Strand=Plus/Minus Query 48146 TGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCC 48205 |||| ||| ||||| |||||||||||| ||||||||||| ||| || ||||||| || Sbjct 137037 TGCAGGCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGCGAGGCCGGGCATGAGACCG 136978 Query 48206 CTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCC 48265 | | ||||||||||| || | ||| ||||| ||||||||||| ||||| || || Sbjct 136977 CGTTTCTTGAGCCAGAAGATGGAACAGAAGGAGCCCGAGAAGAAGATACCCTCGACGGCG 136918 Query 48266 GCGAACGCGGTGAGCCTCTCTCCGAAAG------AAGCGTTCTTGTCTGAGATCCAGGAA 48319 ||||| || ||| | ||| | || | | | | ||||| |||||| Sbjct 136917 GCGAATCCGACGAGACGCTCGGCAAAGGTGTCGAGACCCTCCTTGT---TGATCCACCGC 136861 Query 48320 AGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT-- 48377 | ||||| || ||||||||||||| | |||| ||||| ||||| ||||| | Sbjct 136860 ATTGCCCACTCGGCCTTCTTCTTGACCGAGGGCACCGTCTTGATGGCGTTAAAGAGATGG 136801 Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT----AGTGAGCAGCTTTGCGTACATCTCA 48433 ||| || | | |||| || ||||| || ||| ||| | ||| |||| Sbjct 136800 GCTT--TTTCTACAGGGTCCTTGACGTAGGTGTCCAG-GAGGAGC---GAGTAGGTCTCC 136747 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAG 48472 ||||| | ||||| || || || ||||| ||||||||| Sbjct 136746 GAGTGGATGTTCTCGATGGCAATTTGGAAGCCGTAGAAG 136708 Score = 95.1 bits (104), Expect = 2e-14 Identities = 267/399 (67%), Gaps = 17/399 (4%) Strand=Plus/Plus Query 213565 GGATGGTGCCCAGGTTCTGGTGGTTTGACTTTG--CGTTGGCAGAATCCTTGTAGAGCAT 213622 |||||||||| |||| ||||||||| ||||| ||||| | ||||| |||||||| Sbjct 144732 GGATGGTGCCAAGGTGCTGGTGGTT--ACTTTTGCCGTTGCATGCGTCCTTATAGAGCAT 144789 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTG-GCCT 213681 ||||| | |||||||| | || ||| | || ||| | ||| || | |||| |||| Sbjct 144790 ATAGGGCGTGCCGGTCTCGACTTGTGACTCGAGGATCGCGAACCACAGCT-CCTGTGCCT 144848 Query 213682 TGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAAT 213740 ||| || | | | ||| | | | ||| || | |||||| || | ||| Sbjct 144849 TGATGGTGCGTCGGGCG----CGGCCTTCCCGCTCATATCGGATGTAGAGTTCCTCGAAC 144904 Query 213741 TCGTGGCCCCAGAC--CCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCAG 213797 | || ||||| || |||| || ||||| | || ||| | | || |||| Sbjct 144905 TGGTCTCCCCAAACGTCCTGA--AGACCCGGTGCTTCATTGGGGTCGAAC-AGCGACCAG 144961 Query 213798 TCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGG 213857 | || || | ||| | || |||||| || |||||||||||||| ||| ||| ||| Sbjct 144962 TAGCCACCAGCCTCGACGCGCTTCATGAATAGATCCGGGACCCACAGGGCGTAGAAGAGG 145021 Query 213858 TCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATG 213917 || | | | |||| ||| || ||| || ||||| || || ||||||||| Sbjct 145022 TCGCGAGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTGAGATCGAGGAACTCAAAGATG 145081 Query 213918 TCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCC 213956 |||| ||||| ||||||| |||||| || ||||| ||| Sbjct 145082 TCCGAATGCCAGGGCTCCAGGTAGATCGCGAAGGCTCCC 145120 Score = 86.0 bits (94), Expect = 1e-11 Identities = 156/227 (69%), Gaps = 10/227 (4%) Strand=Plus/Minus Query 47860 CTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGG 47919 ||| |||||||| ||||| ||||| | ||||| |||||| || |||||||||| | Sbjct 138907 CTCGAAGAAGTTGGTCTTGCCCTCGAGTGAGATCAGCTCCATCCAGGGGAAGGGGTTCGT 138848 Query 47920 TGTGTTATACACCCGTGTCAGGCCCATCT--GTTCCA---GCAGGTGATCCGCGACGTAC 47974 | ||| || |||| | | || | || ||| |||| | || ||||| || Sbjct 138847 GGCGTTGTA-----GTGTTTGTCGCACCCAAGTGCCACGAGCAGACGGTCGGCGACAAAC 138793 Query 47975 TCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTT 48034 || ||||| | |||||||| |||||| || ||||| | ||| || | | || Sbjct 138792 TCAATGTACTGGCACATGAGGCCCGCGTTCATACCGATGAGCGCCACCGGGAGCGACTCC 138733 Query 48035 GTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT 48081 |||| |||||||||||| |||| ||||| || || |||||||| Sbjct 138732 GTGACAAACTCCTTCTCGATCTCGACGGCCTCGAGGACGATCTGCTT 138686 >seq4177 Length=147 Score = 91.5 bits (100), Expect = 3e-13 Identities = 72/86 (84%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 213897 AGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCC 213956 || || | ||||||||||||||| |||||||||||||| | ||||||||||||||||||| Sbjct 125 AGCTCCAAAAAGTCAAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCC 66 Query 213957 GGCCTCTT---GCCGCCCTGGTCCAC 213979 | ||| |||||||||||| || Sbjct 65 TTGCGCTTGCCGCCGCCCTGGTCGAC 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930612352440320