Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F000826285.1_202015-01- 07] 79,048 sequences; 66,025,675 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq78562 84.2 3e-11 >seq78562 Length=9756 Score = 84.2 bits (92), Expect = 3e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 184601 GTTCAGCAGGAGCACCCCCTGGCGCGCCCAGCTGTCGAGGTGGCCGTGGTTGGGCGTCCG 184660 ||| |||| |||||| |||||||||||||| ||||||| |||||| ||||||| | Sbjct 4506 GTTGAGCATGAGCACGCCCTGGCGCGCCCACTCCTCGAGGTAGCCGTGCTTGGGCGGCAC 4447 Query 184661 GAACCCCTCGATG-GAGCGTTGCAGCTCCCTGTAGATGTTGCGCAGCGACGGCGCCACGG 184719 ||| ||||||||| | || |||||| |||||||||| ||||| |||| | || Sbjct 4446 GAAGCCCTCGATGTCTGTACTG-AGCTCCTTGTAGATGTTCTTGAGCGAGGGCGGAAGGG 4388 Query 184720 CCCCG 184724 || || Sbjct 4387 CCACG 4383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658088299796480