Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F000826285.1_202015-01- 07] 79,048 sequences; 66,025,675 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq77892 95.1 1e-14 >seq77892 Length=46295 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/144 (77%), Gaps = 6/144 (4%) Strand=Plus/Minus Query 53530 GATGGGCGACAAGTTTGCATC-CTTCACGGCGCAAAAGGG-GACATG-CGGAGCGGTCCT 53586 ||| |||||||||||||| || | |||||| |||||||| | |||| || ||| || Sbjct 32842 GATTGGCGACAAGTTTGCGTCGCGACACGGC-CAAAAGGGCGTCATGTCGCAGCTGTG-- 32786 Query 53587 GACTCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCC 53646 | |||||||| ||||||||||| | || || || ||||||| ||||||||||||| Sbjct 32785 GCCTCAGGAGAACATGCCCTTCAGCGAGTCGGGCATGTCGCCCGACGTCATCATCAACCC 32726 Query 53647 CCACGCCTTTCCCTCCAGGATGAC 53670 |||||||| || || | ||||| Sbjct 32725 GCACGCCTTCCCGTCGCGCATGAC 32702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405771903388528