Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002105255.1_202017-04- 21] 46,799 sequences; 74,697,533 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq6099 96.9 3e-15 >seq6099 Length=7165 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 99652 TAGATGTTCTGGAGGCTGGGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCG 99711 ||||| || |||| |||||||||||| ||||||||||| || |||||| |||||| Sbjct 5295 TAGATCTTGCGGAGTGAGGGCGGGATCGGTACGCCGCGGTTGACAGAGAAGGCAAGGCCG 5236 Query 99712 TGGGCCTGCCCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 ||||| || || | | || ||||||||| ||||||||||| || || || || Sbjct 5235 TGGGCTTGACCCTCGTTGAAGTAGGGGTCTTGGCCCAGGATTACTACTTTCAC 5183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440641279479240