Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002105255.1_202017-04- 21] 46,799 sequences; 74,697,533 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq156 91.5 1e-13 >seq156 Length=7294 Score = 91.5 bits (100), Expect = 1e-13 Identities = 111/145 (77%), Gaps = 6/145 (4%) Strand=Plus/Minus Query 71418 GGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTT 71477 |||||| | || || |||||||| ||||||||||||| ||||||| || || || Sbjct 5463 GGTCATGCGCGACGGGAAGGCGTGCGGGTTGATGATGACGTCGGGCGACATGCCCGACTC 5404 Query 71478 GTCGAAGGGCATGTCCTCCTGGGTCAGGACAGCTCCG-CATGTC-CCCTTTTGCGCCGTG 71535 | ||||||||||| |||||| | | | |||| || |||| | |||||||| |||||| Sbjct 5403 GCTGAAGGGCATGTTCTCCTGCGGC--CATAGCTGCGACATGACGCCCTTTTG-GCCGTG 5347 Query 71536 -AATGACGCAAACTTGTCGCCCATC 71559 ||||||||||||||||| ||| Sbjct 5346 TCGCGACGCAAACTTGTCGCCAATC 5322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338571581155896