Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002105255.1_202017-04- 21] 46,799 sequences; 74,697,533 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq960 315 1e-80 seq8173 268 2e-66 seq2671 215 1e-50 seq283 210 4e-49 seq21360 194 3e-44 seq18213 165 2e-35 seq11040 156 8e-33 seq34906 129 1e-24 >seq960 Length=8959 Score = 315 bits (348), Expect = 1e-80 Identities = 987/1504 (66%), Gaps = 81/1504 (5%) Strand=Plus/Minus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||| | ||| | ||||||||||| | || ||||||||| || || ||||| | || Sbjct 8843 GTAGATGTTGGTCGTGTAGGGCTCAAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTCGA 8784 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGA-GGC 213066 ||| || |||||||| || || || || ||| | | ||||| | | ||| ||| Sbjct 8783 GGCAGTCGGCATGGGCGCGACGAGCAGCGAGTTGCGGAGGCCGTGGCGGGCAATGTTGGC 8724 Query 213067 GCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGT 213126 || | || ||||||||||| | | | ||| || | || || || | || Sbjct 8723 GC-GCAGAGTGGCCCAGTCCCAACGGTCCGACGGGACGACGCCC---------CAGAGGT 8674 Query 213127 CAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCT 213186 | |||| |||| || | || ||| |||| | ||||| ||| | Sbjct 8673 CGGGTTGCAGCTTGCCCTTCGAGGCCGGCGAGCCGGGGTAGGTCTCGTAGGTGCCCTCGA 8614 Query 213187 CCTTGGCCAGCTCGCAGGACGCCT-GCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCC 213245 ||| |||||||||| || ||| ||| | | || ||||||||||| ||||| || | Sbjct 8613 CCTGGGCCAGCTCGTTCGAGGCCACGCAAG-CGGCATAGTAGATGGTCTCAAAGATGGCG 8555 Query 213246 CTGTTGAGCTTCTTGGCCTCTGGGG------ACGTGAAGGGCATCATCATGCGTTGGAAC 213299 | |||||||| |||||| | ||| | | ||| |||||| || Sbjct 8554 CGGTTGAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGGCGCAGGATCATG------AAG 8501 Query 213300 ACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAG 213359 || || ||||| ||||| || || ||||||||||| | ||| | | |||| || || | Sbjct 8500 ACGTCGGCCAGGCCCTGCACGCCAATGCCGATGGGGCGGTGGCGCTGGTTCGAGGTGCGG 8441 Query 213360 CACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACT 213419 ||| || ||||| ||||| |||||| | |||||||||||| |||| | || Sbjct 8440 GCCTCGGGCACCGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTTGGTGACGACC 8381 Query 213420 TTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCA 213479 ||| || | ||| | || ||||| ||| | ||||| | |||| Sbjct 8380 TTGACCACGTCAAACAGCTTCTGGTGATCAAACTGG------CCGTCGACGATGAACTTG 8327 Query 213480 GGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT---GAGAGTCTGTGTACTCC 213536 ||||||||||| |||||||||||| |||||||| || | | ||| ||||||| Sbjct 8326 GGCAGGGCGATCGAGGCCAGGTTGCACACGGCCACTTCGTCGGGCGAG---GTGTACTGG 8270 Query 213537 ATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTT 213596 |||| ||| ||||||||||| | |||| |||||||||| ||| ||||| ||||| Sbjct 8269 ATGACCTCCGTGCACAGGTTCGACGACTGGATCGTGCCCAGGTGCTGCTGGTTCGACTTG 8210 Query 213597 GCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGT 213656 |||| | |||||||||||||||||||| | || ||||| | ||| ||| | || Sbjct 8209 CTGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCCAGTCTCGATCTGCGACTCGAGG 8150 Query 213657 ATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGT--AGCCT 213714 ||| |||||| | | ||||||||||||||| | | | ||| | | || || Sbjct 8149 ATCGCAAACCAGAGCTCCTGGGCCTTGACCACCCGGCGGGC----GCGGCCCTCCAG-CT 8095 Query 213715 CGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTC---CAGTCCCG--G 213769 |||| | || || ||| | || || | |||||| | ||| ||| || | | Sbjct 8094 CGTAGCGCTCATACTTCTCCTCAAACTCCTTGCCCCA---CGAGTCAAACAGGCCGGGCG 8038 Query 213770 ACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCA-TCTCTGACTCTCTGCATGAACA 213828 | | | ||| || | ||| |||||| ||| || ||| ||| | || |||||| | Sbjct 8037 CCTCGTT--GGGGCAGAAGAGCGACCAGTCGCCGCCAGACTC-GACGCGCTTCATGAAGA 7981 Query 213829 GGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGT 213888 |||| |||| |||||| || ||| ||||| | | | |||| ||| || || Sbjct 7980 GGTCGGGGATCCACAGGCCGTAGAAGAGGTCGCGAGCGCGGTTCTCCTCCTTGCCGTGGT 7921 Query 213889 TTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAA 213948 | || || || | ||||||||||||||| |||||||||||||| | |||||||||| Sbjct 7920 TCTTCTTGAGCTCCAAAAAGTCAAAGATGTCGGCGTGCCACGGCTCGAGATAGATGGCAA 7861 Query 213949 AGGCGCCCGGCCTCTT---GCCGCCCTGGTCCAC-CAGCCTGGCCACCAT-GTTGAAGAT 214003 |||||||| | ||| |||||||||||| || ||| || || | |||| ||| Sbjct 7860 AGGCGCCCTTGCGCTTGCCGCCGCCCTGGTCGACGTAGC--GGGCAGTGTCGTTGTAGAC 7803 Query 214004 GCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGA 214063 |||||| | || || || ||||| || |||||||| || || |||||| ||| Sbjct 7802 GCGCAGCATCGGGACGAGACCGTTCGAGGTGCCGTTGGTGCCGCGAATGTACGAGTTGGA 7743 Query 214064 GGCCCTCAGGTTGCTCATGGAGAGC----CCTATGCCACCGGCGTACTTGGAGATCATGG 214119 ||| | || ||| ||| ||| || || || || || |||||||||| | || Sbjct 7742 GGCGC---GGATGC-GGTGGGCAGCGACGCCGATACCGCCAGCTGACTTGGAGATGAGGG 7687 Query 214120 CGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGA 214179 |||| || | | || || ||| || | || ||| || | | | | || | || Sbjct 7686 CGCACTGCTTGAGCGTGTCGTAGATACCCTCGATCGAGTCCTCCTTCATGGTGAGGAGGA 7627 Query 214180 AGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGA 214239 |||| ||| ||||| || | || | ||| | |||||| || || || |||| ||| Sbjct 7626 AGCACGACGAAAGCTGCGGGCGGGGGGTGCCGGCGTTGAAGAGGGTCGGTGTGGCGTGGG 7567 Query 214240 TCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGT 214299 | | | || | ||||| | ||||||||| | ||| | |||||||| || | ||| Sbjct 7566 TGAAGAGCTGTTGCGAGAGCAAGTCGTAGGTCTCGATGACGGCGGGGATGTTGTCCATGT 7507 Query 214300 G--GATCTGTAGAGCGCA--CCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCT-TT 214354 | || | || ||| | ||| |||||||||||||| | ||| | | || | | Sbjct 7506 GAAGACC----GACGGCAACACGCATGAGCATGTGCTGGGGGCGCTCGA-CGATCTTGTC 7452 Query 214355 GGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAGGTATG 214414 | | | || ||||| || ||||| || ||||| || || ||||| | |||| | | Sbjct 7451 GTCGATCCGGAAGAGGTAAGACCGCTCGAGGGTCTTAAATCCGAAGTACGTGTAGTTGTA 7392 Query 214415 ATCG 214418 |||| Sbjct 7391 ATCG 7388 >seq8173 Length=3122 Score = 268 bits (296), Expect = 2e-66 Identities = 568/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Plus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| || || | ||| || |||||| | |||| ||||| | | Sbjct 1257 TCGAAGAAGTTGGTCTTGCCTTCAAGCGAAATAAGCTCCATCCACGGGAACGGGTTAGAT 1316 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 | ||| || | ||||| ||| | | || || | || |||||| ||||||| Sbjct 1317 GAGTTGTAGTGCT-TGTCACAGCCGAGAGCGACGAGAAGCCGGTCGGCGACGAACTCGAT 1375 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| || ||||||||| || || | |||||||| | | |||| Sbjct 1376 GTACTGGCACATGAGGTTGGCGTTCATGCCAATAAGAGCCACGGGCAGCGATTCCGTGAC 1435 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTA---ACGCGGGACTCTGA 48096 ||||||||||| |||| || || || || |||||||| ||| || | || Sbjct 1436 GAACTCCTTCTCGATCTCGACAGCCTCAAGGACGATCTGCTTGGGCACGTCGGTC---GA 1492 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| ||| | || | ||||| | ||| |||||||| | ||||| || || Sbjct 1493 GGGCTTGTTGACCAG---CATGCCGTAGAGGAGGCAAGCAAAGTCGCAGTGCAGACCCTC 1549 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 ||| |||||||| ||| ||||| |||| ||||| ||||| | || | || ||||| Sbjct 1550 GTCGCGGCTGATAAGCTCGTTGCTGAAGGCAAGACCGGGCATCAGGCCGCGCTTCTTGAG 1609 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||||||||| ||||||||||||||||| || || ||||| || | Sbjct 1610 CCAGAAGATGGAGCAGAAAGAGCCGGAGAAGAAGATGCCCTCGACCGCGGCGAAGCCGAT 1669 Query 48277 GAGCCTCTCTCCGAAAG------AAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| ||| | | | | |||| | |||||| | ||||| || Sbjct 1670 GAGACGCTCGGGGAAGGTCTCGACACCCTCCTTG---CAAATCCAGCGCATGGCCCACTC 1726 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACC 48390 ||||||||||| | | |||| ||||| |||||||||||||| | | ||| Sbjct 1727 GGCCTTCTTCTTCACCGAGGGCACAGTCTCCATGGCCCGGAAGAGGTGGTCCTTCTCGAT 1786 Query 48391 TGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | || ||| ||||| |||| ||| | |||||| || ||||| | ||||| Sbjct 1787 CGGATCTTTAACGTAGGTGTCGATGAGGAGC---GAGTACATTTCCGAGTGGATGTTCTC 1843 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 |||||||||||||| ||||||||| | ||||| ||| |||||||| | ||| Sbjct 1844 GATAGCGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGGCACTTGCACTTCCTTCATGAA 1903 Query 48508 TCTCTCCAG-CAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | |||| ||| ||||| ||| || ||||| || || |||||||| || || | Sbjct 1904 GC-GGCCAGCCAGGTTCTCGGCGACGATGCCATCGCTGGCGGCGAAGAAGGCCAGCACGT 1962 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || ||||| || | |||| | | |||| || | ||| || || Sbjct 1963 GCTTGATGAAGTGCTTCTCGTCGTTGCTGAGCGAAGCCCAGTGCTTCATGTCGGCGCTCA 2022 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 || || || || | |||||||| || || || || |||||||| |||| ||| Sbjct 2023 AATCGACCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACATCTCCCAAATG 2081 >seq2671 Length=7052 Score = 215 bits (238), Expect = 1e-50 Identities = 497/742 (67%), Gaps = 20/742 (3%) Strand=Plus/Plus Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 |||||| | || ||| | |||||||||| | |||||||| ||||||||| ||| Sbjct 2819 AGCAGGCGGTCGGCGGCAAACTCGATGTACTGGCACATGAGGCCTGCGTTCATGCCGATG 2878 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 || | ||| || | | || |||| |||||||||||| |||| ||||| || || Sbjct 2879 AGCGCCACCGGGAGTGACTCCGTGACAAACTCCTTCTCGATCTCGACGGCCTCGAGGACG 2938 Query 48074 ATCTGC-TTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 |||||| || | || ||| || || ||||| || || | | || | | ||| Sbjct 2939 ATCTGCCTTGGCACGTCGCTC-GACGGCTTGTT---CACAAGCATACCGTACAAGAGGCA 2994 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 |||||| || ||||| ||| ||||| |||||||||||| ||||||||||| ||| || Sbjct 2995 GGCAAACTCGGCGTGCAGGCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGCGAGGCC 3054 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 ||||||| || | | ||||||||||| || | ||| ||||| ||||||||||| Sbjct 3055 GGGCATGAGACCGCGTTTCTTGAGCCAGAAGATGGAACAGAAGGAGCCCGAGAAGAAGAT 3114 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTC 48306 |||||| ||||| |||||| | ||| | ||| | || || | | | ||||| Sbjct 3115 GCCCTCGACTGCGGCGAACCCAACGAGGCGCTCGGCAAAGGTGTCGACGCCCTCCTTGT- 3173 Query 48307 TGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||||| | |||||| || ||||||||||| | | |||| ||| || ||||| Sbjct 3174 --TGATCCATCGCATCGCCCACTCGGCCTTCTTCTTCACCGAGGGCACCGTTTCGATGGC 3231 Query 48367 CCGGAAGAGCT---TCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGC 48423 |||||| | ||| ||| | | |||| || |||||| || || | Sbjct 3232 ATTGAAGAGATGGGCCTT---CTCGACGGGGTCCTTGACGTAGGTATCCAGGAGGAGCGA 3288 Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||| |||| ||||| | ||||| || || || ||||| || |||||| | ||||| Sbjct 3289 GTAGGTCTCTGAGTGGATGTTCTCGATGGCTATTTGGAAGCCATAGAAGCATCGTGCCTC 3348 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 ||| ||||| ||| | ||| | | || ||||| || || || || Sbjct 3349 GGGCACTTGCACCTCTTTCATGAAGCGACCGGCCAAGTTCTCCGCCACAATGCCGTCGCT 3408 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 ||| |||||||| || || || || || | ||| || | |||| | ||||| | Sbjct 3409 AGCGGCAAAGAATGCCAGAACGTGCTTGATGAAGTGCTGTTCGTCAGCTGAGAGAGATTG 3468 Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663 |||| || | ||| | ||| || || || || || | ||||||||||| || || Sbjct 3469 CCAGTGCTTCATGTCGTCGCCGAGATCGACCTCCTCGGCTGTCCAGAAGGAGGCCTCGGC 3528 Query 48664 TTTTTTGTACATGCCCCATATG 48685 || |||||||| |||| ||| Sbjct 3529 CTTCTTGTACATCTCCCAGATG 3550 >seq283 Length=14928 Score = 210 bits (232), Expect = 4e-49 Identities = 310/437 (71%), Gaps = 14/437 (3%) Strand=Plus/Minus Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901 ||| || |||||||| |||||||||||| ||||| ||||| | |||||| |||||| Sbjct 3297 GTACTCGCCCACTCTTCGCTCAAAGAAGTTGGTCTTGCCCTCGAGTGAGATGAGCTCCAT 3238 Query 47902 GAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTG-----TTCCAGC 47956 | ||||||| || | || ||| || ||| || |||| | ||||| Sbjct 3237 CCACGGGAAGGGATTCGTTGAGTTGTA-----GTGCTTGGGGCATCCGAGGGCCACCAGC 3183 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 ||| |||| || ||| | ||||| || | ||||||| | ||||||||| ||||| Sbjct 3182 AGGCGATCGGCCACGAATTCGATATACTGACACATGAGCCCGGCGTTCATGCCGATGAGC 3123 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||||| |||| | | ||||| |||||||||||| |||| |||||||| | ||| Sbjct 3122 GACACCGGCAGCGATTCTGTGACAAACTCCTTCTCAATCTCGACGGCTTCGAGGATGATC 3063 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 ||||| | | | |||||||||||| | | || || ||||| | ||||||| Sbjct 3062 TGCTTGGGCACGTCCACCGAGGGTTTGTTG---ACGAGCATGCTGTAGAGGAGGCAGGCA 3006 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| |||| ||||| || || || |||||| ||||||| ||| ||| || ||| Sbjct 3005 AAGTCGGCATGCATCCCTTCATCTCGACTAATGAGCTCGTTGGAAAAGGCGAGGCCGGGC 2946 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 |||| || | || |||||||| || || | ||| ||||||||||||||||||||| Sbjct 2945 ATGAGTCCGCGCTTCTTGAGCCA-AAGATGGAGCAGAAGGAGCCAGAGAAGAAGATGCCC 2887 Query 48257 TCCACTGCCGCGAACGC 48273 || || || || ||||| Sbjct 2886 TCGACGGCGGCAAACGC 2870 >seq21360 Length=1073 Score = 194 bits (214), Expect = 3e-44 Identities = 669/1029 (65%), Gaps = 66/1029 (6%) Strand=Plus/Minus Query 212585 GGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATGTGCATTGC 212644 |||||| || ||||||||||| ||||| |||||||||| |||| ||| | |||||| | Sbjct 983 GGTGCGCAGGTAGTACATGCCCGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGA 924 Query 212645 TGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAG--GTTCAGG 212702 ||||| || || | | || |||| |||| ||||| ||| || Sbjct 923 GGTGAGCTTG----GCAAACGAG---GG-----CTCG---CCCA--TGTAGACGTTGAGC 881 Query 212703 GACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCTGG 212762 ||||| |||||||| ||| | | | | ||| ||||||||||| ||||| | | |||| Sbjct 880 GACTGGCTCTGGTCGATGTAGGCCGAGCGGTCGGCGGCCATGTCGATGATGACGCGCTGG 821 Query 212763 GAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTC 212822 | |||||||| || |||||| ||| | |||| ||| || |||| || |||| | Sbjct 820 GGCAGCTCCCATACCGTCTTGTAGAGCTTCTTGATGTCGTCAGGGATCTCGTCGATGCGC 761 Query 212823 TGCACAGACCCCCTGTGTATGGTC-AGCTGCAGGCGCATGTCCTC---GTTCCAGAGGCC 212878 || || || || |||| ||| | |||| | | || || | ||||||||| Sbjct 760 TGGACCGAGCCGTTGTGC-TGGACGAGCTT---GTTCTTGAGCTGCGGGGACCAGAGGCC 705 Query 212879 CCTGGTCTCCAGGCACTTG-ACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCA 212937 | || || | | | | |||||| |||||| | | |||||| || | || | Sbjct 704 GCGCAGCTGGAG-CTCGCGCAACAGGTGCTCGTTGACGACCGTGAAGTCGCCGGCCAGGA 646 Query 212938 CCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCT 212997 | | | ||| | ||| | ||||||||||| | || ||||||||| || || |||| Sbjct 645 TGCGGCGCGTGTAGATGTTGGTCGTGTAGGGCTCAAAGCACTCGTTGTTGCCGAGGATCT 586 Query 212998 GTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGC 213057 | | || || || |||||||| || || || || ||| | | ||||| | Sbjct 585 GCGAGGTCGACGCAGTCGGCATGGGCGCGACGAGCAGCGAGTTGCGGAGGCCGTGGCGGG 526 Query 213058 CGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACG 213116 | ||| ||||| | || ||||||||||| | | | ||| || | || || Sbjct 525 CAATGTTGGCGC-GCAGAGTGGCCCAGTCCCAACGGTCCGACGGGACGACGCCC------ 473 Query 213117 TTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAG 213176 || | ||| ||||| |||| || | || ||| |||| | |||| Sbjct 472 ---CAGAGGTCGGGCTGCAGCTTGCCCTTCGAGGCCGGCGAGCCGGGGTAGGTCTCGTAG 416 Query 213177 GGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCT-GCAGGGCAGCGTAGTAGATGGTTTC 213235 | ||| | ||| |||||||||| || ||| ||| | | || ||||||||||| || Sbjct 415 GTGCCCTCGACCTGGGCCAGCTCGTTCGAGGCCACGCAAG-CGGCATAGTAGATGGTCTC 357 Query 213236 AAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGG------ACGTGAAGGGCATCATCAT 213289 ||| || | | |||||||| |||||| | ||| | ||| ||||| Sbjct 356 AAAGATGGCGCGGTTGAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGACGCAGGATCAT 297 Query 213290 GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349 | || || || ||||| ||||| || || ||||||||||| | ||| | | |||| Sbjct 296 G------AAGACGTCGGCCAGGCCCTGCACGCCAATGCCGATGGGGCGGTGGCGCTGGTT 243 Query 213350 AGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409 || || | ||| || ||||| ||||| |||||| | |||||||||||| Sbjct 242 CGAGGTGCGGGCCTCGGGCACCGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTT 183 Query 213410 GGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTG 213469 |||| | || ||| || | ||| | || ||||| ||| | ||||| Sbjct 182 GGTGACGACCTTGACCACGTCAAACAGCTTCTGGTGATCAAACTGG------CCGTCGAC 129 Query 213470 CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT---GAGAGTC 213526 | |||| ||||||||||| |||||||||||| |||||||| || | | ||| Sbjct 128 GATGAACTTGGGCAGGGCGATCGAGGCCAGGTTGCACACGGCCACTTCGTCGGGCGAG-- 71 Query 213527 TGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTG 213586 ||||||| |||| ||| ||||||||||| | |||| |||||||||| ||| || Sbjct 70 -GTGTACTGGATGACCTCCGTGCACAGGTTCGACGACTGGATCGTGCCCAGGTGCTGCTG 12 Query 213587 GTTTGACTT 213595 ||| ||||| Sbjct 11 GTTCGACTT 3 >seq18213 Length=2148 Score = 165 bits (182), Expect = 2e-35 Identities = 430/640 (67%), Gaps = 28/640 (4%) Strand=Plus/Plus Query 213794 CCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852 |||||| ||| || ||| ||| | || |||||| ||||| |||| |||||| || || Sbjct 123 CCAGTCGCCGCCAGACTC-GACGCGCTTCATGAAGAGGTCGGGGATCCACAGGCCGTAGA 181 Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912 | ||||| | | | |||| ||| || ||| || || || | |||||||| Sbjct 182 AGAGGTCGCGAGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTGAGCTCCAAAAAGTCAA 241 Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTT---GCCGC 213969 ||||||| |||||||||||||| | ||||||||||||||||||| | ||| ||||| Sbjct 242 AGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCCTTGCGCTTGCCGCCGC 301 Query 213970 CCTGGTCCAC-CAGCCTGGCCACCAT-GTTGAAGATGCGCAGGACGGGTACCAGCCCGTT 214027 ||||||| || ||| || || | |||| ||| |||||| | || || || |||| Sbjct 302 CCTGGTCGACGTAGC--GGGCAGTGTCGTTGTAGACGCGCAGCATCGGGACGAG-ACGTT 358 Query 214028 GGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAG 214087 || |||||||| || || |||||| |||||| | || ||| ||| || Sbjct 359 CGAGGTGCCGTTGGTGCCGCGAATGTACGAGTTGGAGGCGC---GGATGC-GGTGGGCAG 414 Query 214088 C----CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGA 214143 | || || || || || |||||||||| | |||||| || | | || || || Sbjct 415 CGACGCCGATACCGCCAGCTGACTTGGAGATGAGGGCGCACTGCTTGAGCGTGTCGTAGA 474 Query 214144 TGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGG 214203 | || | || ||| || | | | | || | |||||| ||| ||||| || | || Sbjct 475 TACCCTCGATCGAGTCCTCCTTCATGGTGAGGAGGAAGCACGACGAAAGCTGTGGGCGGG 534 Query 214204 ACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCC 214263 | ||| | |||||| || ||||| |||| ||| | | | || | ||||| | Sbjct 535 GGGTGCCGGCGTTGAAGAGGGTGGGCGTGGCGTGGGTGAAGAGCTGTTGCGAGAGCAAGT 594 Query 214264 TGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTG--GATCTGTAGAGCGCA--CCTC 214319 ||||||||| | ||| | |||||||| || | |||| || | || ||| | | Sbjct 595 CGTAGGTCTCGATGACGGCGGGGATGTTGTCCATGTGAAGACC----GACGGCAACACGC 650 Query 214320 ATCAGCATGTGCTGGGGCCTCTCTATGGGTCCT-TTGGGGCCCTTGAGCAGGTAGGAGCG 214378 || |||||||||||||| | ||| | | || | | | | | || ||||| || || Sbjct 651 ATGAGCATGTGCTGGGGGCGCTCGA-CGATCTTGTCGTCGATCCGGAAGAGGTAAGACCG 709 Query 214379 CTCCAGAGTCTTGAACCCAAAGTAGGAGTAGGTATGATCG 214418 ||| || ||||| || || ||||| | |||| | | |||| Sbjct 710 CTCGAGGGTCTTAAATCCGAAGTACGTGTAGTTGTAATCG 749 >seq11040 Length=1541 Score = 156 bits (172), Expect = 8e-33 Identities = 342/508 (67%), Gaps = 17/508 (3%) Strand=Plus/Minus Query 48188 AGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAG 48247 ||||| ||||| | || | || ||||||||||| || | ||||||||| |||||| Sbjct 1541 AGACCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAAGAGCCGGAGAAG 1482 Query 48248 AAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCG------TTC 48301 ||||||||||| || || ||||| || |||| | ||| ||| | || | | Sbjct 1481 AAGATGCCCTCGACCGCGGCGAAGCCGATGAGACGCTCGGGGAAGGTCTCGACACCCTCC 1422 Query 48302 TTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCT 48361 ||| | |||||| | ||||| || ||||||||||| | | |||| ||||| Sbjct 1421 TTGC---AAATCCAGCGCATGGCCCACTCGGCCTTCTTCTTCACCGAGGGCACAGTCTCC 1365 Query 48362 ATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAG---TGAGCAGC 48418 |||||||||||||| | | ||| | || ||| ||||| |||| ||| Sbjct 1364 ATGGCCCGGAAGAGGTGGTCCTTCTCGATCGGATCTTTAACGTAGGTGTCGATGAGGAGC 1305 Query 48419 TTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTG 48478 | |||||| || ||||| | ||||| |||||||||||||| ||||||||| | Sbjct 1304 ---GAGTACATTTCCGAGTGGATGTTCTCGATAGCGATCTGGAAGCCGTAGAAGCAGCGC 1248 Query 48479 GCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAG-CAGATTCTCATTGACTATCCC 48537 ||||| |||||||||||| | ||| | |||| ||| ||||| ||| || || Sbjct 1247 GCCTCGGGCACCTGCACTTCCTTCATGAAGC-GGCCAGCCAGGTTCTCGGCGACGATGCC 1189 Query 48538 ATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG 48597 ||| || || |||||||| || || || || | ||| || ||||| || | |||| Sbjct 1188 ATCGCTGGCGGCGAAGAAGGCCAGCACGTGCTTGATGAAGTGCTTCTCGTCGTTGTTGAG 1129 Query 48598 AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 | | |||| || | ||| || || || || || || | |||||||| || || Sbjct 1128 CGAAGCCCAGTGCTTCATGTCGGCGCTCAAATCGACCTCCTCGGCGGTCCAGAACGAGGC 1069 Query 48658 GAGTGCTTTTTTGTACATGCCCCATATG 48685 || || |||||||| |||| ||| Sbjct 1068 CTCGGCCTTCTTGTACATCTCCCAAATG 1041 >seq34906 Length=1558 Score = 129 bits (142), Expect = 1e-24 Identities = 228/328 (70%), Gaps = 11/328 (3%) Strand=Plus/Minus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| || || | ||| || |||||| | |||| ||||||| | Sbjct 323 TCGAAGAAGTTGGTCTTGCCTTCAAGCGAAATAAGCTCCATCCACGGGAACGGGTTGGAT 264 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 | ||| || | ||||| ||| | | || || | || |||||| ||||||| Sbjct 263 GAGTTGTAGTGCT-TGTCACAGCCGAGAGCGACGAGAAGCCGGTCGGCGACGAACTCGAT 205 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| || ||||||||| || || | |||||||| | | |||| Sbjct 204 GTACTGGCACATGAGGTTGGCGTTCATGCCAATAAGAGCCACGGGCAGCGATTCCGTGAC 145 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 ||||||||||| |||| || || || || |||||||| ||| || | || Sbjct 144 GAACTCCTTCTCGATCTCGACAGCCTCAAGGACGATCTGCTTGGGCACGTCGGTC---GA 88 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| || || || | ||||| | ||| |||||||| | ||||| || || Sbjct 87 GGGCTTGTTGACCA---GCATGCCGTAGAGGAGGCAAGCAAAGTCGCAGTGCAGACCCTC 31 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAG 48184 ||| |||||||| ||| ||||| |||| Sbjct 30 GTCGCGGCTGATAAGCTCGTTGCTGAAG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930987864956160