Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002105255.1_202017-04- 21] 46,799 sequences; 74,697,533 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq960 306 7e-78 seq8173 208 1e-48 seq18213 197 3e-45 seq2671 196 9e-45 seq11040 143 5e-29 seq21360 140 6e-28 seq283 102 2e-16 >seq960 Length=8959 Score = 306 bits (338), Expect = 7e-78 Identities = 722/1080 (67%), Gaps = 29/1080 (3%) Strand=Plus/Minus Query 221492 CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTC 221551 ||||| ||| |||||||||||||| ||||| || || || |||||||| | ||| | | Sbjct 8515 CGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACGCCAATGCCGATGGGGCGGTGGCGC 8456 Query 221552 CTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGG 221611 ||| || | | || || ||||| || || |||||| |||||||| ||||||||| Sbjct 8455 TGGTTCGAGGTGCGGGCCTCGGGCACCGGGTAGTAGTTGATGTCGATCACCTTGTTGAGG 8396 Query 221612 TTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCCG 221671 ||| |||| ||| || ||||| || |||||||||||||| | |||| |||| Sbjct 8395 TTCTTGGTGACGACCTTGACCACGTCAAACAGCTTCTGGTGAT------CAAACTGGCCG 8342 Query 221672 CCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCC 221731 || || || || || ||||| | ||||||||| ||||||||| Sbjct 8341 TCGACGATGA--------ACTTGGGC----AGGGCGATCGAGGCCAGGTTGCACACGGCC 8294 Query 221732 ACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTC 221791 || ||||| ||| ||||| |||| ||| || || ||||| ||| ||| || Sbjct 8293 ACTTCGTCGGGCGAGGTGTACTGGATGACCTCCGTGCACAGGTTCGACGACTGGATCGTG 8234 Query 221792 CCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCG 221851 |||||||| | || || ||||||| ||| ||||||||||||||||| |||| | Sbjct 8233 CCCAGGTGCTGCTGGTTCGACTTGCTGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTG 8174 Query 221852 CCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTC 221911 |||||||| | ||| | | | || ||| |||||| || ||| | ||| || Sbjct 8173 CCAGTCTCGATCTGCGACTCGAGGATCGCAAACCAGAGCTCCTGGGCCTTGACCACCCGG 8114 Query 221912 TTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTAC 221971 | | ||||| || | || | ||| | ||||||| | || || Sbjct 8113 CGGGCGCGGCCCTCCAGCT---CGTAGCGCTCATACTTCTCCTCAAACTCCTTGCCCCAC 8057 Query 221972 GCCTCGTCCAGGCCTGGACACCTGGC-GGGACACATCAGACTCCAGT-GCTTGTTGTCTT 222029 | || |||||| || | ||| | ||| || | || ||||| || | || Sbjct 8056 GAGTCAAACAGGCCGGG-CGCCTCGTTGGGGCAGAAGAGCGACCAGTCGCCGCCAGACTC 7998 Query 222030 TGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCT 222089 ||| | || |||||||||||| ||||||||||| | | ||||| || | | || | Sbjct 7997 -GACGCGCTTCATGAAGAGGTCGGGGATCCACAGGCCGTAGAAGAGGTCGCGAGCGCGGT 7939 Query 222090 GCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACG 222149 ||||||| ||||| ||| ||| | || |||||||| ||||| ||||| |||||||||| Sbjct 7938 TCTCCTCCTTGCCGTGGTTCTTCTTGAGCTCCAAAAAGTCAAAGATGTCGGCGTGCCACG 7879 Query 222150 GCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCT 222209 |||| ||||||| ||| | ||||| |||||| ||| ||||| || | | | Sbjct 7878 GCTCGAGATAGATGGCAAAGGCGCCCTTGCGCTTGCCGCCGCCCTGGTCGA-CGTAGCGG 7820 Query 222210 CCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCC 222268 ||| | ||||| ||| ||| || |||| || || ||||| || ||||||||||| Sbjct 7819 GCAGTGTCGTTGTAGACGCGCAGCATCGGGACGAGACCGTTCGAGGTGCCGTTGGTGCCG 7760 Query 222269 TTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACCGGCGTGT 222328 |||||||| | ||| | | | ||||| | ||||||||| || || Sbjct 7759 CGAATGTACGAGTTGGAGGCGCGGATGCGGTGGGCAGCGACGCCGATACCGCCAGCTGAC 7700 Query 222329 TTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTG 222388 || ||||| | |||||| |||||| ||||| ||| ||||| || ||||||||||| Sbjct 7699 TTGGAGATGAGGGCGCACTGCTTGAGCGTGTCGTAGATACCCTCGATCGAGTCCTCCTTC 7640 Query 222389 ACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTG 222448 | | | || || || || ||||| | ||| | || || | |||||| || || || Sbjct 7639 ATGGTGAGGAGGAAGCACGACGAAAGCTGCGGGCGGGGGGTGCCGGCGTTGAAGAGGGTC 7580 Query 222449 GGACTGGCGTGTGTAAAGTAGCCCCT-AGACATCAGATCGTACGTCTCTACGACTCTGGC 222507 || ||||||| || ||| ||| | || | || ||||| ||||| | ||| || Sbjct 7579 GGTGTGGCGTGGGTGAAG-AGCTGTTGCGAGAGCAAGTCGTAGGTCTCGATGACGGCGGG 7521 Query 222508 GATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCAC 222567 |||||||||| ||||| | ||| | |||| ||||| |||||| | ||| || Sbjct 7520 GATGTTGTCCATGTGAAGACCGACGGCAACACGCATGAGCATGTGCTGGGGGCGCTCGAC 7461 >seq8173 Length=3122 Score = 208 bits (230), Expect = 1e-48 Identities = 563/856 (66%), Gaps = 26/856 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | ||| |||||||||||| ||| | ||| || Sbjct 2080 ATTTGGGAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGGTCGATTTG 2021 Query 25537 GCCAAGGACATGGACGGCTGG--TACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT 25594 | |||||| | |||| | ||||| ||| |||||| |||| || ||||| Sbjct 2020 AGCGCCGACATGAAGCACTGGGCTTCGCTCAG--CAACGACGAGAAGCACTTCATCAAGC 1963 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 ||||| |||| ||||| || ||| ||||| || || |||||| ||| | | | Sbjct 1962 ACGTGCTGGCCTTCTTCGCCGCCAGCGATGGCATCGTCGCCGAGAACCTGGCTGGCCGCT 1903 Query 25655 TCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| | ||||||||| || | | |||| || |||||||| |||||||| || ||| Sbjct 1902 TCATGAAGGAAGTGCAAGTGCCCG-AGGCGCGCTGCTTCTACGGCTTCCAGATCGCTATC 1844 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||||| || |||| | ||| || || || ||| ||| ||| Sbjct 1843 GAGAACATCCACTCGGAAATGTACTC---GCTCCTCATCGACACCTACGTTAAAGATCCG 1787 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 ||||| || | || || | ||||| ||| | ||| | |||| |||||| Sbjct 1786 ATCGAGAAGGACCACCTCTTCCGGGCCATGGAGACTGTGCCCTCGGTGAAGAAGAAGGCC 1727 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAG---CGCTACGTTTGGCGAGCGGCTGGTA 25887 |||||||||| ||||| || || | || || || |||||| || | Sbjct 1726 GAGTGGGCCATGCGCTGGATTTGCAAGGAGGGTGTCGAGACCTTCCCCGAGCGTCTCATC 1667 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCT 25946 | ||| || || || ||||||||||| ||| ||| || || ||| ||||||||||||| Sbjct 1666 GGCTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGCTCTTTCTGCT-CCATCTTCTGGCT 1608 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 |||| || || |||||||| || ||| ||||||||| |||||| | ||||| Sbjct 1607 CAAGAAGCGCGGCCTGATGCCCGGTCTTGCCTTCAGCAACGAGCTTATCAGCCGCGACGA 1548 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC 26066 |||||| ||| | || ||||| ||||| |||||| ||| || || |||| || | Sbjct 1547 GGGTCTGCACTGCGACTTTGCTTGCCTCCTCTAC---GGCATGCTGGTCAACAAGCC--C 1493 Query 26067 TCAAGAGAC-CGTCTA--CAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCN 26123 || | ||| | | | ||| ||| || |||||||| ||||||||||||||||| Sbjct 1492 TCGACCGACGTGCCCAAGCAG-ATCGTCCTTGAGGCTGTCGAGATCGAGAAGGAGTTCGT 1434 Query 26124 NNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACAT 26183 | ||||||||| || |||||| |||| ||||| Sbjct 1433 CACGGAATCGCTGCCCGTGGCTCTTATTGGCATGAACGCCAACCTCATGTGCCAGTACAT 1374 Query 26184 TGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCC 26243 |||| || ||||||| || || | || || | || | ||||| | | Sbjct 1373 CGAGTTCGTCGCCGACCGGCTTCTCGTCGCTCTCGGCTGTGACAAGCACTACAACTCATC 1314 Query 26244 TAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAA 26303 |||||||||| | ||||| || ||| | ||||| |||||||||||||| ||| Sbjct 1313 TAACCCGTTCCCGTGGATGGAGCTTATTTCGCTTGAAGGCAAGACCAACTTCTTCGAACG 1254 Query 26304 GAGGGTCGGCGACTAT 26319 | || ||||| ||| Sbjct 1253 CCGCGTTGGCGAGTAT 1238 >seq18213 Length=2148 Score = 197 bits (218), Expect = 3e-45 Identities = 371/539 (69%), Gaps = 5/539 (1%) Strand=Plus/Plus Query 222031 GACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTG 222090 ||| | || |||||||||||| ||||||||||| | | ||||| || | | || | Sbjct 141 GACGCGCTTCATGAAGAGGTCGGGGATCCACAGGCCGTAGAAGAGGTCGCGAGCGCGGTT 200 Query 222091 CTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGG 222150 ||||||| ||||| ||| ||| | || |||||||| ||||| ||||| ||||||||||| Sbjct 201 CTCCTCCTTGCCGTGGTTCTTCTTGAGCTCCAAAAAGTCAAAGATGTCGGCGTGCCACGG 260 Query 222151 CTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTC 222210 ||| || |||| ||| | ||||| |||||| ||| ||||| || | | | Sbjct 261 CTCGAGGTAGATGGCAAAGGCGCCCTTGCGCTTGCCGCCGCCCTGGTCGA-CGTAGCGGG 319 Query 222211 CAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCT 222269 ||| | ||||| ||| ||| || |||| || || |||| || ||||||||||| Sbjct 320 CAGTGTCGTTGTAGACGCGCAGCATCGGGACGAG-ACGTTCGAGGTGCCGTTGGTGCCGC 378 Query 222270 TAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACCGGCGTGTT 222329 |||||||| | ||| | | | ||||| | ||||||||| || || | Sbjct 379 GAATGTACGAGTTGGAGGCGCGGATGCGGTGGGCAGCGACGCCGATACCGCCAGCTGACT 438 Query 222330 TCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGA 222389 | ||||| | |||||| |||||| ||||| ||| ||||| || ||||||||||| | Sbjct 439 TGGAGATGAGGGCGCACTGCTTGAGCGTGTCGTAGATACCCTCGATCGAGTCCTCCTTCA 498 Query 222390 CGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGG 222449 | | || || || || ||||| | ||| | || || | |||||| || || |||| Sbjct 499 TGGTGAGGAGGAAGCACGACGAAAGCTGTGGGCGGGGGGTGCCGGCGTTGAAGAGGGTGG 558 Query 222450 GACTGGCGTGTGTAAAGTAGCCCCT-AGACATCAGATCGTACGTCTCTACGACTCTGGCG 222508 | ||||||| || ||| ||| | || | || ||||| ||||| | ||| || | Sbjct 559 GCGTGGCGTGGGTGAAG-AGCTGTTGCGAGAGCAAGTCGTAGGTCTCGATGACGGCGGGG 617 Query 222509 ATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCAC 222567 ||||||||| ||||| | ||| | |||| ||||| |||||| | ||| || Sbjct 618 ATGTTGTCCATGTGAAGACCGACGGCAACACGCATGAGCATGTGCTGGGGGCGCTCGAC 676 >seq2671 Length=7052 Score = 196 bits (216), Expect = 9e-45 Identities = 443/653 (68%), Gaps = 16/653 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | ||| |||||| ||||| ||| | ||||| Sbjct 3549 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACAGCCGAGGAGGTCGATCTC 3490 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | | | |||||| | |||| | |||| || ||||| ||||| || ||||| || Sbjct 3489 GGCGACGACATGAAGCACTGGCAATCTCTCTCAGCTGACGAACAGCACTTCATCAAGCAC 3430 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || ||||||||||||| || || || || ||| ||||| || || | ||| Sbjct 3429 GTTCTGGCATTCTTTGCCGCTAGCGACGGCATTGTGGCGGAGAACTTGGCCGGTCGCTTC 3370 Query 25657 ACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGA 25715 | | || ||||| || | | |||| || ||||| || ||||| || |||||||| Sbjct 3369 ATGAAAGAGGTGCAAGTGCCCG-AGGCACGATGCTTCTATGGCTTCCAAATAGCCATCGA 3311 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGA 25775 || | ||||| ||| || | || ||| || ||| | | ||| || ||| Sbjct 3310 GAACATCCACTCAGAGACCTACTCGCTCCTCCTGGATACCTACGTCAAGGACCCCGTCGA 3251 Query 25776 GAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTG 25835 || | | || || ||||||||| | ||| | |||| |||||| ||| Sbjct 3250 GAAGGCCCATCTCTTCAATGCCATCGAAACGGTGCCCTCGGTGAAGAAGAAGGCCGAGTG 3191 Query 25836 GGCCATGAAGTGGATCAACAGCCAGAGCGCT---ACGTTTGGCGAGCGGCTGGTAGCCTT 25892 ||| ||| |||||||||| || ||| || |||| |||||| || || | || Sbjct 3190 GGCGATGCGATGGATCAACAAGGAGGGCGTCGACACCTTTGCCGAGCGCCTCGTTGGGTT 3131 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 || || || ||||||||||| ||| || || || ||||||||||||||||| | Sbjct 3130 CGCCGCAGTCGAGGGCATCTTCTTCTCGGGCTCCTTCTGTTCCATCTTCTGGCTCAAGAA 3071 Query 25953 GAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011 | | || | ||||||||| || ||| |||||||||||||||||| | |||||||| | Sbjct 3070 -ACGCGGTCTCATGCCCGGCCTCGCCTTCTCCAACGAGCTCATCAGCCGCGACGAGGGCC 3012 Query 26012 TCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAG 26071 | ||| || ||||||||||| || | |||| |||| | |||| || || || Sbjct 3011 TGCACGCCGAGTTTGCCTGCCT-CT-TGTACGGTATGCTTG-TGAACAAGCC--GTCGAG 2957 Query 26072 AGACCGTCTA---CAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121 ||| | | ||| ||| || ||||| || |||||||||||||||||| Sbjct 2956 CGACGTGCCAAGGCAG-ATCGTCCTCGAGGCCGTCGAGATCGAGAAGGAGTTT 2905 >seq11040 Length=1541 Score = 143 bits (158), Expect = 5e-29 Identities = 330/489 (67%), Gaps = 21/489 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | ||| |||||||||||| ||| | ||| || Sbjct 1042 ATTTGGGAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGGTCGATTTG 1101 Query 25537 GCCAAGGACATGGACGGCTGG--TACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT 25594 | |||||| | |||| | ||||| | ||| |||||| |||| || ||||| Sbjct 1102 AGCGCCGACATGAAGCACTGGGCTTCGCTCAA--CAACGACGAGAAGCACTTCATCAAGC 1159 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 ||||| |||| ||||| || ||| ||||| || || |||||| ||| | | | Sbjct 1160 ACGTGCTGGCCTTCTTCGCCGCCAGCGATGGCATCGTCGCCGAGAACCTGGCTGGCCGCT 1219 Query 25655 TCACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 ||| | |||||||||| ||| ||||| || |||||||| |||||||| || | Sbjct 1220 TCATGAAGGAAGTGCAG---GTGCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCGCTA 1276 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACG 25768 |||| || | ||||| || |||| | ||| || || || ||| ||| ||| Sbjct 1277 TCGAGAACATCCACTCGGAAATGTA---CTCGCTCCTCATCGACACCTACGTTAAAGATC 1333 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 ||||| || | || || | ||||| ||| | ||| | |||| ||||| Sbjct 1334 CGATCGAGAAGGACCACCTCTTCCGGGCCATGGAGACTGTGCCCTCGGTGAAGAAGAAGG 1393 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG---CGCTACGTTTGGCGAGCGGCTGG 25885 | |||||||||| ||||| || || | || || || |||||| || Sbjct 1394 CCGAGTGGGCCATGCGCTGGATTTGCAAGGAGGGTGTCGAGACCTTCCCCGAGCGTCTCA 1453 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGG 25944 | | ||| || || || ||||||||||| ||| ||| || || ||| ||||||||||| Sbjct 1454 TCGGCTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGCTCTTTCTGC-TCCATCTTCTGG 1512 Query 25945 CTCAAGCAG 25953 |||||| || Sbjct 1513 CTCAAGAAG 1521 >seq21360 Length=1073 Score = 140 bits (154), Expect = 6e-28 Identities = 226/326 (69%), Gaps = 18/326 (6%) Strand=Plus/Minus Query 221491 ACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCT 221550 |||||| ||| |||||||||||||| ||||| || || || |||||||| | ||| | Sbjct 308 ACGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACGCCAATGCCGATGGGGCGGTGGCG 249 Query 221551 CCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAG 221610 | ||| || | | || || ||||| || || |||||| |||||||| |||||||| Sbjct 248 CTGGTTCGAGGTGCGGGCCTCGGGCACCGGGTAGTAGTTGATGTCGATCACCTTGTTGAG 189 Query 221611 GTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCC 221670 |||| |||| ||| || ||||| || |||||||||||||| | |||| ||| Sbjct 188 GTTCTTGGTGACGACCTTGACCACGTCAAACAGCTTCTGGTGAT------CAAACTGGCC 135 Query 221671 GCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGC 221730 | || || || || || ||||| | ||||||||| |||||||| Sbjct 134 GTCGACGATGA--------ACTTGGGC----AGGGCGATCGAGGCCAGGTTGCACACGGC 87 Query 221731 CACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGT 221790 ||| ||||| ||| ||||| |||| ||| || || ||||| ||| ||| || Sbjct 86 CACTTCGTCGGGCGAGGTGTACTGGATGACCTCCGTGCACAGGTTCGACGACTGGATCGT 27 Query 221791 CCCCAGGTGATTGTGATTAGACTTGC 221816 |||||||| | || || ||||||| Sbjct 26 GCCCAGGTGCTGCTGGTTCGACTTGC 1 >seq283 Length=14928 Score = 102 bits (112), Expect = 2e-16 Identities = 165/230 (72%), Gaps = 8/230 (3%) Strand=Plus/Plus Query 25817 TCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG---CGCTACGTTTG 25873 ||||| | ||||| |||||| | ||||||||| || || | || || || Sbjct 2796 TCAAGCGCAAGGCCGAGTGGGCGCTCAAGTGGATCGCCAAGGAGGGACTCGACACATTCC 2855 Query 25874 GCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCG 25932 ||| || || || || ||||| || || ||||||||||| ||| || || || ||| Sbjct 2856 CCGAACGCCTCGTGGCGTTTGCCGCCGTCGAGGGCATCTTCTTCTCTGGCTCCTTCTGCT 2915 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 ||||||| ||||||||| || | |||| ||||||||| || ||||||||||||||| Sbjct 2916 -CCATCTT-TGGCTCAAGAAGC-GCGGACTCATGCCCGGCCTCGCCTTTTCCAACGAGCT 2972 Query 25992 CATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 ||| || | || || || | || || ||||||||||| ||||||| Sbjct 2973 CATTAGTCGAGATGAAGGGATGCATGCCGACTTTGCCTGCCTCCTCTACA 3022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928301437402560