Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002105255.1_202017-04- 21] 46,799 sequences; 74,697,533 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq11020 95.1 1e-14 seq19135 86.0 5e-12 >seq11020 Length=1763 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| ||| | || ||||| |||||||| |||| ||| | || Sbjct 95 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATTACGCTCGAGGTTGAGTCGAGC 154 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || || ||||| || || || ||| | ||| ||| ||| Sbjct 155 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 214 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | || || || ||||| ||||||| | || | || ||||||||| Sbjct 215 CAGCGCCTTATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCGCTGACTACAAC 274 Query 107736 ATTCAAAAGGAGTCTAC 107752 || || ||||||||||| Sbjct 275 ATCCAGAAGGAGTCTAC 291 >seq19135 Length=1020 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | || || || || || || |||| ||| | || Sbjct 22 ATGCAGATCTTCGTCAAGACCCTTACGGGAAAGACGATCACGCTCGAGGTTGAGTCCAGC 81 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | || || |||||||| || || || ||| | ||| ||| ||| Sbjct 82 GATACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 141 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | ||| || || ||||| ||||||| | || |||| ||||||||| Sbjct 142 CAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTGGCCGACTACAAC 201 Query 107736 ATTCAAAAGGAGTCTAC 107752 || || |||||||| || Sbjct 202 ATCCAGAAGGAGTCGAC 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398649295506511