Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002105255.1_202017-04- 21] 46,799 sequences; 74,697,533 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq156 87.8 1e-12 >seq156 Length=7294 Score = 87.8 bits (96), Expect = 1e-12 Identities = 110/145 (76%), Gaps = 6/145 (4%) Strand=Plus/Plus Query 52766 GATGGGCGACAAGTTTGCGTCGTT-CACGGCGCAAAAGGG-GACGTG-CGGAGCCGTCCT 52822 ||| |||||||||||||||||| |||||| |||||||| | | || || ||| | Sbjct 5322 GATTGGCGACAAGTTTGCGTCGCGACACGGC-CAAAAGGGCGTCATGTCGCAGCTATG-- 5378 Query 52823 GACCCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCC 52882 | | |||||| ||||||||||| | || || || ||||||| ||||||||||||| Sbjct 5379 GCCGCAGGAGAACATGCCCTTCAGCGAGTCGGGCATGTCGCCCGACGTCATCATCAACCC 5438 Query 52883 CCACGCCTTTCCCTCCAGGATGACC 52907 |||||||| || || | |||||| Sbjct 5439 GCACGCCTTCCCGTCGCGCATGACC 5463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406078655657508