Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002179805.1_202017-06- 08] 10,743 sequences; 75,569,356 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq206 86.0 5e-12 >seq206 Length=17459 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 ||||||||||| || || ||||| || || | || | ||||||| ||||| || || Sbjct 12192 GTAGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCA 12251 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 || | ||||| | |||||| ||| ||| | |||||| ||||| || ||||| || Sbjct 12252 GCGAAGATAAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 12311 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | ||| || |||| | ||| |||| |||||||| || || || | || Sbjct 12312 ACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGCGTAATGGTCTTGCCGGTCAGCGTC 12371 Query 19025 TTGACAAAAATTTGCAT 19041 ||||| || || ||||| Sbjct 12372 TTGACGAAGATCTGCAT 12388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414518519853742