Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002179805.1_202017-06- 08] 10,743 sequences; 75,569,356 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3619 610 1e-169 seq79 583 2e-161 seq6640 376 5e-99 seq803 376 5e-99 seq6041 140 6e-28 seq7035 120 6e-22 >seq3619 Length=11060 Score = 610 bits (676), Expect = 1e-169 Identities = 1273/1879 (68%), Gaps = 73/1879 (4%) Strand=Plus/Minus Query 243741 TGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799 ||||||||| || || | | ||||| ||| | ||||||||||||||| |||||||| Sbjct 8903 TGAACTGGATCGCGTTGGCGGCCGGCCG-GGTGCGCAGGTAGTACATGCCCGTCTTGAGG 8845 Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859 || || |||||||| || |||||| | || ||||| | | ||| || Sbjct 8844 CCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTGAGCTTGGCAAAC--GAG-----GG--- 8795 Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919 ||||| || ||| |||||| |||||||||||||||| | ||| || || || ||| Sbjct 8794 --CTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAGGCCGAGCGGTCGGCG 8737 Query 243920 GCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||||| ||||| | | ||| | | ||| | |||||||||||| ||||| | Sbjct 8736 GCCATGTCGATGATGACGCGCTGGGGCAGCTCCCATACCGTCTTGTAGAGCTTCTTGATG 8677 Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039 | || |||| | | |||||| ||| |||||||| ||||| || ||||| | | Sbjct 8676 TCGTCAGGGATCTCGTCGATGCGCTGGACCGAGCCGTTGTGCTGGACGAGCTTGTTCTTG 8617 Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCG---ACCAGGTGCCTGTTCACC 244096 | | | ||| ||||| |||| | | |||| | ||||||| ||| || Sbjct 8616 AGCTGCGGGGACCAGAGGCC---GCGCAGCTGGAGCTCGCGCAACAGGTGCTCGTTGACG 8560 Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 ||| || || || | ||| | ||||||| ||||| |||| | || ||||| | | Sbjct 8559 ACCGTGAAGTCGCCGGCCAGGATGCGGCGCGTGTAGATGTTGGTCGTGTAGGGCTCAAAG 8500 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 | ||| ||||||| || ||||||| || ||||||||||||||||| || ||||| Sbjct 8499 CACTCGTTGTTGCCGAGGATCTGCGAGGTCGACGCAGTCGGCATGGGCGCGACGAGCAGC 8440 Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCC 244276 ||| | | |||||| | ||| | | || | ||||||||| | || Sbjct 8439 GAGTTGCGGAGGCCGTGGCGGGCAATGTTGGCGCGCAGAGTGGCCCAGTCCCAACGGTCC 8380 Query 244277 GAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGG 244336 || || | || |||||| | ||| ||||||| ||||| | | || Sbjct 8379 GACGGGAC---------GACGCCCCAGAGGTCGGGCTGCAGCTTGCCCTTCGAGGCCGGC 8329 Query 244337 CTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGG 244396 ||| ||||||| ||||| || ||| ||||||||||| | || | | | | Sbjct 8328 GAGCCGGGGTAGGTCTCGTAGGTGCCCTCGACCTGGGCCAGCTC---GTTCGAGGCCACG 8272 Query 244397 ---GCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453 ||||| |||||||||||||| ||||| ||| | |||||||||| | ||| Sbjct 8271 CAAGCGGCATAGTAGATGGTCTCAAAGATGGCGCGGTTGAGCTCGCGGGCCTCGTCGCTC 8212 Query 244454 GTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATG 244513 | ||| | || |||||||||||||||||||| ||||||||||| ||||||||| Sbjct 8211 TCCCACGGGTGACGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACGCCAATGCCGATG 8152 Query 244514 GGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATC 244573 || | ||| |||| ||| ||| ||| |||||||| ||||| ||||| ||||||| Sbjct 8151 GGGCGGTGGCGCTGGTTCGAGGTGCGGGCCTCGGGCACCGGGTAGTAGTTGATGTCGATC 8092 Query 244574 ACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTAC 244633 |||||||||||||| ||||| | ||| ||||| |||| ||| || || Sbjct 8091 ACCTTGTTGAGGTTCTTGGTGACGACCTTGACCACGTCAAACAGCTTCTGGTGATCAAAC 8032 Query 244634 TCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGG 244693 | | | ||| ||||| |||| | ||||||| ||||||| Sbjct 8031 TGGCCG------TCGACGATG------------AACTTGGGCAGGGCGATCGAGGCCAGG 7990 Query 244694 TTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTG 244753 ||||| |||||||| || || | ||||||||||| | ||| ||||| ||||| Sbjct 7989 TTGCACACGGCCACTTCGTCGGGCGAGGTGTACTGGATGACCTCCGTGCACAGGTTCGAC 7930 Query 244754 CACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGC 244813 ||| ||| |||||||||||||| || || |||||| |||||||||||||||||||||| Sbjct 7929 GACTGGATCGTGCCCAGGTGCTGCTGGTTCGACTTGCTGTTGCAGGCGTCCTTGTAGAGC 7870 Query 244814 ATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGC 244872 ||| ||||| || ||||||| ||| | |||||| ||| |||||| ||| || Sbjct 7869 ATGTAGGGCGTGCCAGTCTCGATCTGCGACTCGAGGATCGC-AAACCAGAGCTCCTGGGC 7811 Query 244873 CTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTC 244932 ||||||| || ||| || |||||| ||||||||| ||| |||| ||||| Sbjct 7810 CTTGACCACCCGGCGGGCGCGGCCCTCCAGCTCGTAGCGCTCATACTTCTCCTCAAACTC 7751 Query 244933 GGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACG-CCGGGCACATGAGACTCCACTCGC 244991 |||||| || ||||| |||| | || ||||| | ||| ||| |||| Sbjct 7750 CTTGCCCCACGAGTCAAACAGGCC-GGGCGCCTCGTTGGGGCAGAAGAGCGACCAGTCGC 7692 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 |||| || ||| | || ||||||||||||||||||||| ||| | | ||||||||| | Sbjct 7691 CGCCAGACTCGACGCGCTTCATGAAGAGGTCGGGGATCCACAGGCCGTAGAAGAGGTCGC 7632 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 | | | ||| ||| ||| ||||||| | ||||||||||||||||||| |||| Sbjct 7631 GAGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTGAGCTCCAAAAAGTCAAAGATGTCGG 7572 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||| ||||| | |||| || | |||||| |||||| ||| |||||||| | Sbjct 7571 CGTGCCACGGCTCGAGATAGATGGCAAAGGCGCCCTTGCGCTTGCCGCCGCCCTGGTCGA 7512 Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230 | | | || | ||||| ||| |||||| | || || | ||||| ||| |||| Sbjct 7511 CGTAGCGGGC-AGTGTCGTTGTAGACGCGCAGCATCGGGACGAGACCGTTCGAGGTGCCG 7453 Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATGCCTAG 245286 |||||||| ||||| | | ||| | || ||| | ||| | | ||| | Sbjct 7452 TTGGTGCCGCGAATGTACGAG---TTGGAGGCGCGGATGC-GGTGGGCAGCGACGCCGAT 7397 Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346 ||||| || |||||||||||||||||| ||||| ||||| || ||||| || Sbjct 7396 ACCGCCAGCTGACTTGGAGATGAGGGCGCACTGCTTGAGCGTGTCGTAGATACCCTCGAT 7337 Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGA 245406 |||| ||||||| |||| || ||||| || || ||||| || |||| ||| | Sbjct 7336 CGAGTCCTCCTTCATGGTGAGGAGGAAGCACGACGAAAGCTGTGGGCGGGGGGTGCCGGC 7277 Query 245407 GTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT-CGAGAGGAACCCGTACGTCT 245465 |||||| || ||||| |||||||||| ||| ||| | | |||||| || |||| |||| Sbjct 7276 GTTGAAGAGGGTGGGCGTGGCGTGGGTGAAG-AGCTGTTGCGAGAGCAAGTCGTAGGTCT 7218 Query 245466 GGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCT 245525 || | ||| ||||||||| ||| | | ||| | |||||| |||||| Sbjct 7217 CGATGACGGCGGGGATGTTGTCCATGTGAAGACCGACGGCAACACGCATGAGCATGTGCT 7158 Query 245526 GGGGCGTCTCGATGGGTCCCTCG--GGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTT 245583 |||| ||||| | ||| | ||| || | ||| || |||||||| ||||| Sbjct 7157 GGGGGCGCTCGACGATCTTGTCGTCGATCC--GGAAGAGGTAAGACCGCTCGAGGGTCTT 7100 Query 245584 GAACCCAAAGTACGAGTAG 245602 || || ||||||| |||| Sbjct 7099 AAATCCGAAGTACGTGTAG 7081 >seq79 Length=69635 Score = 583 bits (646), Expect = 2e-161 Identities = 1267/1879 (67%), Gaps = 73/1879 (4%) Strand=Plus/Minus Query 243741 TGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799 ||||||||| || || | | ||||| ||| | ||||||||||||||| |||||||| Sbjct 67407 TGAACTGGATCGCGTTGGCGGCCGGCCG-GGTGCGCAGGTAGTACATGCCCGTCTTGAGG 67349 Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859 || || |||||||| || |||||| | || ||||| | | ||| || Sbjct 67348 CCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTGAGCTTGGCAAAC--GAG-----GG--- 67299 Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919 ||||| || ||| |||||| |||||||||||||||| | ||| || || || ||| Sbjct 67298 --CTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAGGCCGAGCGGTCGGCG 67241 Query 243920 GCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||||| ||||| | | ||| | | ||| || |||| ||||||| ||||| | Sbjct 67240 GCCATGTCGATGATGACGCGCTGGGGCAGCTCCCACACCGTTTTGTAGAGCTTCTTGATG 67181 Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039 | || |||| | | |||||| ||| |||||||| ||||| || ||| | | | Sbjct 67180 TCGTCAGGGATCTCGTCGATGCGCTGGACCGAGCCGTTGTGCTGGACGAGTTTGTTCTTG 67121 Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCG---ACCAGGTGCCTGTTCACC 244096 | | | ||| ||||| |||| | | |||| | ||||||| ||| || Sbjct 67120 AGCTGCGGGGACCAGAGGCC---GCGCAGCTGGAGCTCGCGCAACAGGTGCTCGTTGACG 67064 Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 || || || || | || | ||||||| ||||| |||| | || ||||| | | Sbjct 67063 ACGGTGAAGTCGCCGGCAAGGATGCGGCGCGTGTAGATGTTGGTCGTGTAGGGCTCAAAG 67004 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 | ||| ||||||| || ||||||| || |||||||||||||||| || ||||| Sbjct 67003 CACTCGTTGTTGCCGAGGATCTGCGAGGTCGAGGCAGTCGGCATGGGCGCGACGAGCAGC 66944 Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCC 244276 ||| | | |||||| | ||| | | || | ||||||||| | || Sbjct 66943 GAGTTGCGGAGGCCGTGGCGGGCAATGTTGGCGCGCAGAGTGGCCCAGTCCCAACGGTCC 66884 Query 244277 GAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGG 244336 || || | || ||||| | ||| ||||||| ||||| | | || Sbjct 66883 GATGGGAC---------GACCCCCCAGAGGTCGGGCTGCAGCTTGCCCTTCGAGGCCGGC 66833 Query 244337 CTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGG 244396 ||| ||||||| ||||| || ||| ||||||||||| | || | | | | Sbjct 66832 GAGCCGGGGTAGGTCTCGTAGGTGCCCTCGACCTGGGCCAGCTC---GTTCGAGGCCACG 66776 Query 244397 ---GCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453 ||||| |||||||||||||| ||||| ||| | |||||||||| | ||| Sbjct 66775 CAAGCGGCATAGTAGATGGTCTCAAAGATGGCGCGGTTGAGCTCGCGGGCCTCGTCGCTC 66716 Query 244454 GTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATG 244513 | ||| | || |||||||||||||||||||| ||||||||||| ||||||||| Sbjct 66715 TCCCACGGGTGACGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACGCCAATGCCGATG 66656 Query 244514 GGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATC 244573 || | ||| |||| ||| ||| ||| |||||||| ||||| ||||| ||||||| Sbjct 66655 GGGCGGTGGCGCTGGTTCGAGGTGCGGGCCTCGGGCACCGGGTAGTAGTTGATGTCGATC 66596 Query 244574 ACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTAC 244633 |||||||||||||| ||||| | ||| ||||| |||| ||| || || Sbjct 66595 ACCTTGTTGAGGTTCTTGGTGACGACCTTGACCACGTCAAACAGCTTCTGGTGATCAAAC 66536 Query 244634 TCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGG 244693 | | | ||| ||||| |||| | ||||||| ||||||| Sbjct 66535 TGGCCG------TCGACGATG------------AACTTGGGCAGGGCGATCGAGGCCAGG 66494 Query 244694 TTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTG 244753 ||||| |||||||| || || | ||||||||||| | ||| || || ||||| Sbjct 66493 TTGCACACGGCCACTTCGTCGGGCGAGGTGTACTGGATGACCTCCGTACACAGGTTCGAC 66434 Query 244754 CACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGC 244813 ||| ||| |||||||||||||| || || |||||| |||||||||||||||||||||| Sbjct 66433 GACTGGATCGTGCCCAGGTGCTGCTGGTTCGACTTGCTGTTGCAGGCGTCCTTGTAGAGC 66374 Query 244814 ATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGC 244872 ||| ||||| || ||||||| ||| | |||||| ||| ||| || ||| || Sbjct 66373 ATGTAGGGCGTGCCAGTCTCGATCTGCGACTCGAGGATCGC-AAACCAAAGCTCCTGGGC 66315 Query 244873 CTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTC 244932 ||||||| || ||| || |||||| ||||||||| ||| |||| ||||| Sbjct 66314 CTTGACCACCCGGCGGGCGCGGCCCTCCAGCTCGTAGCGCTCATACTTCTCCTCAAACTC 66255 Query 244933 GGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACG-CCGGGCACATGAGACTCCACTCGC 244991 |||||| || ||||| |||| | || ||||| | ||| ||| |||| Sbjct 66254 CTTGCCCCACGAGTCAAACAGGCC-GGGCGCCTCGTTGGGGCAGAAGAGCGACCAGTCGC 66196 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 |||| || ||| | || ||||||||||||||||||||| ||| | | ||||||||| | Sbjct 66195 CGCCAGACTCGACGCGCTTCATGAAGAGGTCGGGGATCCACAGGCCGTAGAAGAGGTCGC 66136 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 | | | ||| ||| ||| ||||||| | ||||||||||||||||||| |||| Sbjct 66135 GAGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTGAGCTCCAAAAAGTCAAAGATGTCGG 66076 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||| ||||| | ||||| || | |||||| |||||| ||| |||||||| | Sbjct 66075 CGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCCTTGCGCTTGCCGCCGCCCTGGTCGA 66016 Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230 | | | || | ||||| ||| |||||| | || || | ||||| ||| |||| Sbjct 66015 CGTAGCGGGC-AGTGTCGTTGTAGACGCGCAGCATCGGGACGAGACCGTTCGAGGTGCCG 65957 Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATGCCTAG 245286 |||||||| ||||| | | ||| | || ||| | ||| | | ||| | Sbjct 65956 TTGGTGCCGCGAATGTACGAG---TTGGAGGCGCGGATGC-GGTGGGCAGCGACGCCGAT 65901 Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346 ||||| || |||||||||||||||||| ||||| ||||| || ||||| || Sbjct 65900 ACCGCCAGCTGACTTGGAGATGAGGGCGCACTGCTTGAGCGTGTCGTAGATACCCTCGAT 65841 Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGA 245406 |||| ||||||| |||| || ||||| || || ||||| || |||| ||| | Sbjct 65840 CGAGTCCTCCTTCATGGTGAGGAGGAAGCACGACGAAAGCTGCGGGCGGGGGGTGCCGGC 65781 Query 245407 GTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT-CGAGAGGAACCCGTACGTCT 245465 |||||| || ||||| |||||||||| ||| ||| | | |||||| || |||| |||| Sbjct 65780 GTTGAAGAGGGTGGGTGTGGCGTGGGTGAAG-AGCTGTTGCGAGAGCAAGTCGTAGGTCT 65722 Query 245466 GGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCT 245525 || | ||| ||||||||| ||| | | ||| | |||||| |||||| Sbjct 65721 CGATGACGGCGGGGATGTTGTCCATGTGAAGACCGACGGCAACACGCATGAGCATGTGCT 65662 Query 245526 GGGGCGTCTCGATGGGTCCCTCG--GGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTT 245583 |||| ||||| | ||| | ||| || | ||| || |||||||| ||||| Sbjct 65661 GGGGGCGCTCGACGATCTTGTCGTCGATCC--GGAAGAGGTAAGACCGCTCGAGGGTCTT 65604 Query 245584 GAACCCAAAGTACGAGTAG 245602 || || ||||||| |||| Sbjct 65603 AAATCCGAAGTACGTGTAG 65585 >seq6640 Length=3469 Score = 376 bits (416), Expect = 5e-99 Identities = 602/858 (70%), Gaps = 16/858 (2%) Strand=Plus/Plus Query 42292 ACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGA 42351 ||||| ||| ||| |||||||||||||| || ||| |||||||||||||||| Sbjct 1738 ACCAGCGCATTTGGGAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGG 1797 Query 42352 TTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCC 42411 | || || | |||| | ||||| || || | |||||||| ||| Sbjct 1798 TCGATTTGAGCGCCGACATGAAGCACTGGGCTTCGCTCAGCAACGACGAAAAGCACTTCA 1857 Query 42412 TCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCA 42471 |||| || | |||||||||||||||||| || || || ||| ||||||||||| Sbjct 1858 TCAAGCACGTGCTGGCCTTCTTCGCCGCCAGCGATGGTATCGTCGCCGAGAACCTGGCTG 1917 Query 42472 CCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAG 42531 | | |||||||| || |||||| ||||||||||||||||||||||||||||| | Sbjct 1918 GCCGCTTCATGAAGGAAGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCG 1977 Query 42532 CCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATC 42591 | || |||||| | ||||| || ||||| | || || |||| ||| | |||| Sbjct 1978 CTATCGAGAACATCCACTCGGAAATGTACTCGCTCCTCATCGACACCTACGTTAAAGATC 2037 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651 | ||||| || || ||| |||||||||||| |||||| | |||||||||| Sbjct 2038 CGATCGAGAAGGACCACCTCTTCCGGGCCATGGAGACTGTGCCCTCGGTGAAGAAGAAGG 2097 Query 42652 CGGACTGGGCGCTCAACTGGAT------CGAGAGTCCCGACGCAACGTTCGGCGAGAGGC 42705 | || ||||| | |||||| ||| || | || || ||| |||| | | Sbjct 2098 CCGAGTGGGCCATGCGCTGGATTTGCAAGGAGGGT---GTCGAGACCTTCCCCGAGCGTC 2154 Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 | | | ||| |||| |||||||||||||||||||| ||| | ||| ||||||||||| Sbjct 2155 TCATCGGCTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGCTCTTTCTGCTCCATCTTCT 2214 Query 42766 GGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 |||||||| || | ||||||||| || ||||| ||||| || |||||| | | Sbjct 2215 GGCTCAAGAAGCGCGGCCTGATGCCCGGTCTTGCCTTCAGCAACGAGCTTATCAGCCGCG 2274 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 ||||||| ||||| | |||||||| |||||||| | | | | ||| |||||| Sbjct 2275 ACGAGGGTCTGCACTGCGACTTTGCTTGCCTCCTCTACGGCATGCTGGTCA---ACAAGC 2331 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || | || || ||| || ||||| || |||||||||||||||||| Sbjct 2332 CCTCGACCGA-CGTGCCCAAGCAGATCGTCCTTGAGGCTGTCGAGATCGAGAAGGAGTTC 2390 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 ||||| | |||||||||||| | || | ||||||||| | ||||||||||| ||||| Sbjct 2391 GTCACGGAATCGCTGCCCGTGGCTCTTATTGGCATGAACGCCAACCTCATGTGCCAGTAC 2450 Query 43005 ATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACAC 43063 ||| ||| ||||||||||| || || || | || | | | | | ||||||| | Sbjct 2451 ATCGAGTTCGTCGCCGACCGGCTTCTCGTCGCTCTCGGCTGTGA-CAAGCACTACAACTC 2509 Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123 | ||| ||| | |||||| || ||| | || |||||||||||||| ||||| Sbjct 2510 ATCCAACCCGTTCCCGTGGATGGAGCTTATTTCGCTTGAAGGCAAGACCAACTTCTTCGA 2569 Query 43124 GAAGCGCGTCGCCGACTA 43141 ||||| | ||| || Sbjct 2570 ACGCCGCGTTGGCGAGTA 2587 >seq803 Length=10940 Score = 376 bits (416), Expect = 5e-99 Identities = 602/858 (70%), Gaps = 16/858 (2%) Strand=Plus/Plus Query 42292 ACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGA 42351 ||||| ||| ||| |||||||||||||| || ||| |||||||||||||||| Sbjct 1744 ACCAGCGCATTTGGGAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGG 1803 Query 42352 TTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCC 42411 | || || | |||| | ||||| || || | |||| ||| ||| Sbjct 1804 TCGATTTGAGCGCCGACATGAAGCACTGGGCTTCGCTCAACAACGACGAGAAGCACTTCA 1863 Query 42412 TCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCA 42471 |||| || | |||||||||||||||||| || ||||| ||| ||||||||||| Sbjct 1864 TCAAGCACGTGCTGGCCTTCTTCGCCGCCAGCGATGGCATCGTCGCCGAGAACCTGGCTG 1923 Query 42472 CCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAG 42531 | | |||||||| || |||||| ||||||||||||||||||||||||||||| | Sbjct 1924 GCCGCTTCATGAAGGAAGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCG 1983 Query 42532 CCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATC 42591 | || |||||| | ||||| || ||||| | || || |||| ||| | |||| Sbjct 1984 CTATCGAGAACATCCACTCGGAAATGTACTCGCTCCTCATCGACACCTACGTTAAAGATC 2043 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651 | ||||| || || ||| |||||||||||| |||||| | |||||||||| Sbjct 2044 CGATCGAGAAGGACCACCTCTTCCGGGCCATGGAGACTGTGCCCTCGGTGAAGAAGAAGG 2103 Query 42652 CGGACTGGGCGCTCAACTGGAT------CGAGAGTCCCGACGCAACGTTCGGCGAGAGGC 42705 | || ||||| | |||||| ||| || | || || ||| |||| | | Sbjct 2104 CCGAGTGGGCCATGCGCTGGATTTGCAAGGAGGGT---GTCGAGACCTTCCCCGAGCGTC 2160 Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 | | | ||| |||| |||||||||||||||||||| ||| | ||| ||||||||||| Sbjct 2161 TCATCGGCTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGCTCTTTCTGCTCCATCTTCT 2220 Query 42766 GGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 |||||||| || | ||||||||| || ||||| ||||| || |||||| | | Sbjct 2221 GGCTCAAGAAGCGCGGCCTGATGCCCGGTCTTGCCTTCAGCAACGAGCTTATCAGCCGCG 2280 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 ||||||| ||||| | |||||||| |||||||| | | | | ||| |||||| Sbjct 2281 ACGAGGGTCTGCACTGCGACTTTGCTTGCCTCCTCTACGGCATGCTGGTCA---ACAAGC 2337 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || | || || ||| || ||||| || |||||||||||||||||| Sbjct 2338 CCTCGACCGA-CGTGCCCAAGCAGATCGTCCTTGAGGCTGTCGAGATCGAGAAGGAGTTC 2396 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 ||||| | |||||||||||| | || | ||||||||| | ||||||||||| ||||| Sbjct 2397 GTCACGGAATCGCTGCCCGTGGCTCTTATTGGCATGAACGCCAACCTCATGTGCCAGTAC 2456 Query 43005 ATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACAC 43063 ||| ||| ||||||||||| || || || | || | | | | | ||||||| | Sbjct 2457 ATCGAGTTCGTCGCCGACCGGCTTCTCGTCGCTCTCGGCTGTGA-CAAGCACTACAACTC 2515 Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123 | ||| ||| | |||||| || ||| | || |||||||||||||| ||||| Sbjct 2516 ATCCAACCCGTTCCCGTGGATGGAGCTTATTTCGCTTGAAGGCAAGACCAACTTCTTCGA 2575 Query 43124 GAAGCGCGTCGCCGACTA 43141 ||||| | ||| || Sbjct 2576 ACGCCGCGTTGGCGAGTA 2593 >seq6041 Length=3514 Score = 140 bits (154), Expect = 6e-28 Identities = 301/447 (67%), Gaps = 5/447 (1%) Strand=Plus/Minus Query 244721 GTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGA 244780 |||||||||| | ||||| || ||||| ||| |||||| ||||| || ||||| Sbjct 3412 GTGTACTGGAGCACTTCGGTACAAAGGTTGGATGACTGGATGGTACCCAGATGTTGGTGG 3353 Query 244781 TTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGG 244840 || ||||||| |||| |||||| |||||||||||| | || |||||||| | ||| Sbjct 3352 TTCGACTTGGAGTTGACGGCGTCTTTGTAGAGCATGTACGGAGTACCGGTCTCCACCTGA 3293 Query 244841 GCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCC---C 244897 || |||||| ||| | ||| || |||| | | ||| || ||| Sbjct 3292 GCCTCGAGGATAGCAAACCACAACTCCTGGGCATTGATGATGCGGCGTGCACGGCCAGGA 3233 Query 244898 TCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCC- 244956 || ||| ||||| || || ||||||||| | |||||||||| || | ||| || Sbjct 3232 TCCTGCTCATAGCGCTCATAGAGCTCCTCGAACTGGCGGCCCCAGACGTCCTGTAGCCCT 3173 Query 244957 GGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAA 245016 || || | ||||| | ||| ||| || |||| ||| ||| | || |||||| Sbjct 3172 GGCGCTTCA-TTGGGGCAGAAGAGGGACCAGGTGCTGCCGGCCTCGACGCGCTTCATGAA 3114 Query 245017 GAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGT 245076 ||||| || ||||| ||| | | ||| || || | | ||| | ||| ||| ||| Sbjct 3113 CAGGTCCGGTATCCACAGGCCATAGAAAAGATCACGAGCCCTGTTCTCCTCCTTGCCGTG 3054 Query 245077 GTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGC 245136 ||||||| | || || | ||||| |||| |||| | ||||| ||||| | |||| || Sbjct 3053 GTTCTTCTTGAGGTCGAGGAAGTCGAAGATGTCGGCATGCCACGGCTCGAGATAGATGGC 2994 Query 245137 GAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 | ||| || |||||| ||||| Sbjct 2993 AAAGGCTCCCTTTCGCTTGCCACCTCC 2967 >seq7035 Length=2989 Score = 120 bits (132), Expect = 6e-22 Identities = 211/304 (69%), Gaps = 5/304 (2%) Strand=Plus/Minus Query 244294 GAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGG 244353 || |||||||||||| |||||| | |||| | ||| || || |||| || Sbjct 545 GACGCCCCACATGTCCTGCTGCAGGATGCCCTGGGAGACCGGCGAACCTGCGTACGTGTC 486 Query 244354 GTAGGGACCGTCGCGCTG---GGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGAT 244410 ||||| | | || ||| |||||||| | | ||||| | ||| | || || Sbjct 485 GTAGGTGCGGCCGAGCTCCTTGGCCAGCTCGTTGGAGGCCTCGAGCGAGGCATGATAAAT 426 Query 244411 GGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG-CAGGTGAAGGGGATGCCCA 244469 ||||| ||||| | ||||| |||||| |||| |||| | | | | |||| || || Sbjct 425 CGTCTCAAAGATGAGGCGGTTCAGGTCGCGTGCCT-GCCGACTGTTCCATGGGAAGCGCA 367 Query 244470 TCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGT 244529 | | |||||||||||| ||||| ||||| ||||||||||||||||||||||| ||| || Sbjct 366 TGAGCATGAAGACGTCTGCCAGGCCCTGTACGCCGATGCCGATGGGTCTGTGGCGCAGGT 307 Query 244530 TGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGC 244589 | || || ||| || || | || || |||||||||||| || |||||| | Sbjct 306 TCGACCGTTGGGCCTCCGGGATCGGATAGTGGTTGCCGTCGATGACGCGATTGAGGCCTC 247 Query 244590 GGGT 244593 |||| Sbjct 246 GGGT 243 Score = 118 bits (130), Expect = 2e-21 Identities = 306/458 (67%), Gaps = 20/458 (4%) Strand=Plus/Minus Query 243763 GGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTG 243822 |||| |||| | |||||||||||||| |||||||| || || |||||||| | ||| Sbjct 1166 GGCCCTGGTGCGGAGGTAGTACATGCCAGTCTTGAGGCCCTTGCGCCAGGCGTAAAAGTG 1107 Query 243823 CATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAG 243882 ||||| || ||| | | || || | ||| || |||||||||| Sbjct 1106 CATGGAAGTGAGCGTGGCAAAGGTG------GGAGC-----CGC-CATGTAGAGGTTGAG 1059 Query 243883 GGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTG 243942 |||||||||||||||| ||| || || || ||||||| | ||||| | | ||| Sbjct 1058 CGACTGGCTCTGGTCGATATAGGCCGAGCGGTCGGCGGCCAGGTCGATGATGACACGCTG 999 Query 243943 AGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTT 244002 || ||||| | ||||||||||||| || |||||||| || |||| | ||||||| Sbjct 998 CGAGATCTCCCATGCCGTCTTGTAGAGGGCCTTGAGGTCCTGTGGGATGGCGTCGATGTC 939 Query 244003 CTGCACCGAGCCCTTGTGGACGATGAGCTGG--GTGCGCATGTTATCGTTCCACAGGCCC 244060 || || ||||| | || | | | || ||| | ||| || |||| || || Sbjct 938 TTGTACGGAGCCGTGGTTGGCAACGA--TGGCATTCTTCATCCCGTCCGTCCAGAGCCCG 881 Query 244061 AAGCGCTCCAGCGCCTCG-ACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCAC 244119 | || || | | || || |||||| ||| |||||| || || || ||||| Sbjct 880 AGTTGCATGAG-GTCGCGCACGAGGTGCGGGTTGACCACCACGAAGTCGCCGCCGAGCAC 822 Query 244120 GCGGCGCTGGTAGAGGTTGCT-GCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCT 244178 | ||||| | | |||||| | || || || |||| | ||| ||||||||| |||| Sbjct 821 GATGCGCTTGAACAGGTTGGTCGCGTAG-GGTTCGAACCCCTCGCAGTTGCCCAGGATCT 763 Query 244179 GCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 | | ||| || || ||||| || | |||||| ||| Sbjct 762 GGGACGTCGAGGCCGTGGGCATCGGTGCCACCAGTAGA 725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944212387049680