Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002179805.1_202017-06- 08] 10,743 sequences; 75,569,356 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3619 125 6e-24 seq1020 95.1 1e-14 seq1939 93.3 4e-14 seq128 93.3 4e-14 seq358 91.5 1e-13 seq179 91.5 1e-13 seq1262 89.7 5e-13 seq404 89.7 5e-13 seq2145 86.0 6e-12 seq5693 84.2 2e-11 seq412 84.2 2e-11 >seq3619 Length=11060 Score = 125 bits (138), Expect = 6e-24 Identities = 570/886 (64%), Gaps = 31/886 (3%) Strand=Plus/Plus Query 122889 ATCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTG 122948 ||||| || ||| ||| ||| || || || ||||||||||| || || | || | Sbjct 7130 ATCGACGACAAGATCGTCGAGCGCCCCCAGCACATGCTCATGCGTGTTGCCGTCGGTCTT 7189 Query 122949 CAC--GGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTT 123006 ||| |||| ||||| || | ||| || ||||| ||| | || ||| | | | Sbjct 7190 CACATGGACA--ACATCCCCGCCGTCATCGAGACCTACGACTTGCTCTCGCAACAGCTCT 7247 Query 123007 TCACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGT 123066 |||| ||||| | ||||| | ||| ||||||||| || ||| | || |||| Sbjct 7248 TCACCCACGCCACGCCCACCCTCTTCAACGCCGGCACCCCCCGCCCACAGCTTTCGTCGT 7307 Query 123067 GTTTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATT 123126 | || | |||||| || || ||| ||| |||||||| || || | | | Sbjct 7308 GCTTCCTCCTCACCATGAAGGAGGACTCGATCGAGGGTATCTACGACACGCTCAAGCAGT 7367 Query 123127 GCGCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACG-TGCACGACGTAAGAG-G 123184 |||| | || ||||| | | ||||| || ||||| || ||| | || | | | Sbjct 7368 GCGCCCTCATCTCCAAGTCAGCTGGCGGTATCGGCGT---CGCTGCCCACCGCATCCGCG 7424 Query 123185 CCGCGGAAGCCG--CATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTG 123242 || | || || ||| | ||||| |||| | | | ||| |||| | |||||| Sbjct 7425 CCTCC-AACTCGTACATTCGCGGCACCAACGGCACCTCGAACGGTCTCGTCCCGATGCTG 7483 Query 123243 CGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGC---AAACGCAAAGGCGCG 123299 || || ||||| || | | || ||||||||||||||||| || ||||| ||||| Sbjct 7484 CGCGTCTACAACGACACTGCCCGCTACGTCGACCAGGGCGGCGGCAAGCGCAAGGGCGCC 7543 Query 123300 ATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGC 123359 | || |||||||| || |||||||||| || | | || ||||| | | || Sbjct 7544 TTTGCCATCTATCTCGAGCCGTGGCACGCCGACATCTTTGACTTTTTGGAGCTCAAGAAG 7603 Query 123360 AACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGAT 123419 ||| || ||| || || || ||||| | || |||| | ||| | ||||| Sbjct 7604 AACCACGGCAAGGAGGAGAACCGCGCTCGCGACCTCTTCTACGGCCTGTGGATCCCCGAC 7663 Query 123420 TTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGT 123479 | || ||| ||||| | | ||||| ||||||||| | || ||| | | Sbjct 7664 CTCTTCATGAAGCGCGTCGAGTCTGGCGGCGACTGGTCGCTCTTCTGCCCCAACGAGGCG 7723 Query 123480 CCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGC 123539 |||||| || ||| | ||||| ||||||| ||| ||| | || ||||||| Sbjct 7724 CCCGGCCTGTTTGACTCGTGGGGCAAGGAGTTTGAGGAGAAGTATGAGCGCTACGAGCTG 7783 Query 123540 GAAGGCAAACAGGTTAGTCAGGT--TCC-GGCACGTGATTTGTTCAAATTT---ATTATC 123593 || ||| | | | | ||| || ||| | || | || ||| || || Sbjct 7784 GAGGGC---CGCGCCCGCCGGGTGGTCAAGGCCCAGGA---GCTCTGGTTTGCGATCCTC 7837 Query 123594 GAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAA 123653 || | || |||| || || ||||| |||||||||||||| |||||||||||||| || Sbjct 7838 GAGTCGCAGATCGAGACTGGCACGCCCTACATGCTCTACAAGGACGCCTGCAACAGCAAG 7897 Query 123654 ACCAATCAG-AGCAACTTGGGAACAATAAAAT-GTAGTAATCTTTGCTCCGAAATTATCG 123711 | || ||| ||| || |||| || || | | || | || || ||| | || | ||| Sbjct 7898 TCGAACCAGCAGC-ACCTGGGCACGATCCAGTCGTCG-AACCTGTGCACGGAGGTCATCC 7955 Query 123712 AATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGAT 123757 | |||| | |||| ||||||||||||| || |||| ||||| Sbjct 7956 AGTACACCTCGCCCGACGAAGTGGCCGTGTGCAACCTGGCCTCGAT 8001 >seq1020 Length=19758 Score = 95.1 bits (104), Expect = 1e-14 Identities = 166/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || || || || || || ||||| ||||| || || ||| Sbjct 16360 ATACCACCGCGCAGGCGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCG 16301 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || || | || || || ||| | || | || ||||||||||| Sbjct 16300 GCCAAGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGG 16241 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || || || || ||||| || | || | || | ||||| || ||||| Sbjct 16240 GGAATGCCCTCCTTGTCCTGGATCTTTTGCTTCA-CGTTCTCGATCGTGTCCGAGGACTC 16182 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||| ||||| |||| || |||||||| ||||| || || || || ||||| ||| || Sbjct 16181 GACCTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATACCGCCAC 16123 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 45216 CGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTAC 45274 || ||||||||||| || || || || || || ||||| || || || | || | || | Sbjct 16027 CGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTCTGCTTCA-CGTTCTCAAT 15969 Query 45275 GGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAAT 45334 ||||||||| |||||||| ||||| |||| || |||||||| ||||| || || || || Sbjct 15968 GGTGTCGGACGACTCGACCTCGAGCGTAATGGTCTTGCCGGTGAGAGTCTTCACGAAGAT 15909 Query 45335 TTGCAT 45340 ||||| Sbjct 15908 CTGCAT 15903 Score = 86.0 bits (94), Expect = 6e-12 Identities = 162/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | || || || || || || ||||| ||||| || || || | Sbjct 16813 CCACCGCGGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 16754 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | || || || ||| | || | || ||||||||||| || Sbjct 16753 AGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCCGGGGGG 16694 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || || || | || | || | ||||||||| |||||||| Sbjct 16693 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCA-CGTTCTCGATGGTGTCGGACGACTCGAC 16635 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||||| || | ||| || || || || || || || || || ||||| ||| || Sbjct 16634 CTCGAGCGTGATCGTCTTACCCGTAAGGGTCTTGACGAAGATCTGCATGCCGCCAC 16579 >seq1939 Length=16232 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||| ||||| || || ||| | ||| | || || Sbjct 13486 ACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCG 13545 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || ||| | || | || ||||||||||| ||||| || || || || || Sbjct 13546 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGG 13605 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || || || | || | || | |||||| || |||||||| ||||| |||| || || Sbjct 13606 ATCTTCTGCTTCA-CGTTCTCAATGGTGTCCGAGGACTCGACCTCGAGCGTAATGGTCTT 13664 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 |||||| ||||| || || || || ||||| ||| || Sbjct 13665 GCCGGTCAGAGTCTTGACGAAGATCTGCATACCGCCAC 13702 Score = 86.0 bits (94), Expect = 6e-12 Identities = 162/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | || || || || || || ||||| ||||| || || ||| Sbjct 13240 CCGCCGCGGAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 13299 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | || || || ||| | || | || ||||||||||| || Sbjct 13300 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 13359 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || || || | || | || | ||||| || |||||||| Sbjct 13360 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCA-CGTTCTCGATCGTGTCCGAGGACTCGAC 13418 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||||| |||| ||| || || || || ||||| || || || ||||| ||| || Sbjct 13419 CTCGAGCGTAATCGTCTTACCCGTAAGGGTTTTCACGAAGATCTGCATACCGCCAC 13474 >seq128 Length=72164 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || || || || || || ||||| ||||| || || || | Sbjct 5238 CCACCACGGAGGCGGAGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCG 5179 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| || | || || || ||| | || | || ||||||||||| ||| Sbjct 5178 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 5119 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || ||||| || | || | || | ||||| || |||||||| Sbjct 5118 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCA-CGTTCTCGATCGTGTCCGAGGACTCGAC 5060 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| |||| || |||||||| || || || || || || ||||| Sbjct 5059 CTCGAGCGTAATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 5012 >seq358 Length=114647 Score = 91.5 bits (100), Expect = 1e-13 Identities = 165/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | || || || || ||||| ||||| || || || Sbjct 5149 ATGCCGCCACGGAGGCGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCA 5208 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| || || | || || || ||| | || | || ||||||||||| Sbjct 5209 GCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGG 5268 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || ||||| || || || | || | || | ||||| || ||||| Sbjct 5269 GGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCA-CGTTCTCGATCGTGTCCGAGGACTC 5327 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||| ||||| |||| || |||||||| ||||| || || || || ||||| ||| || Sbjct 5328 GACCTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATACCGCCAC 5386 Score = 82.4 bits (90), Expect = 7e-11 Identities = 163/239 (68%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || || || || || || ||||| ||||| || || || Sbjct 4921 ATACCACCGCGCAGGCGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCA 4980 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | || || || ||| | || | || ||||||||||| Sbjct 4981 GCGAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCCGGG 5040 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| || || || || || || || || || | || | || | ||||| |||||||| Sbjct 5041 GGAATTCCCTCCTTGTCCTGGATCTTCTGCTTCA-CGTTCTCAATAGTGTCCGAAGACTC 5099 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||| ||||| || | || ||||| || || || || || || || ||||| ||| || Sbjct 5100 GACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATGCCGCCAC 5158 Score = 82.4 bits (90), Expect = 7e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | || | || ||||||||||| || ||||| || || || || || Sbjct 5917 TGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATC 5976 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || || || | || | || | |||||| || |||||||| ||||| |||| || ||||| Sbjct 5977 TTCTGCTTCA-CGTTCTCAATGGTGTCCGAGGACTCGACCTCGAGCGTAATGGTCTTGCC 6035 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || || || || || ||||| Sbjct 6036 GGTGAGGGTCTTCACGAAGATCTGCAT 6062 >seq179 Length=82183 Score = 91.5 bits (100), Expect = 1e-13 Identities = 165/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || || || || || || ||||| ||||| || || || Sbjct 50496 ATACCACCGCGCAGGCGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCA 50555 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | || || || ||| | || | || ||||||||||| Sbjct 50556 GCGAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGG 50615 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || || || ||||| || | || | || | |||||| ||||| Sbjct 50616 GGGATGCCCTCCTTGTCCTGGATCTTTTGCTT-AACGTTCTCGATCGTGTCGCTCGACTC 50674 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||| ||||| |||| || |||||||| ||||| || || || || ||||| ||| || Sbjct 50675 GACCTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATACCGCCAC 50733 >seq1262 Length=10342 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || || || || || || ||||| ||||| || || || Sbjct 2916 ATACCACCGCGCAGGCGGAGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCA 2857 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | || || || ||| | || | || ||||||||||| Sbjct 2856 GCGAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGG 2797 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| || || || || || || || || |||| || | || | ||||| |||||||| Sbjct 2796 GGAATTCCCTCCTTGTCCTGGATCTTCTGCTTGA-CGTTCTCAATAGTGTCCGAAGACTC 2738 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| || | || ||||| || || || || || || |||||||| Sbjct 2737 GACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATTTGCAT 2687 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || ||||| || | | || || || || || |||||||| ||||| || || ||| Sbjct 3141 CCGCCGCGCAGGCGAAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCC 3082 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | || || || ||| | || | || ||||||||||| || Sbjct 3081 AGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 3022 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || || || | || | || | |||||| || |||||||| Sbjct 3021 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCA-CGTTCTCGATGGTGTCCGACGACTCGAC 2963 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||||| || || || || | || || || || |||||||| Sbjct 2962 CTCGAGAGTAATAGTCTTACCCGTCAAGGTCTTGACGAAGATTTGCAT 2915 >seq404 Length=26703 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || ||||| || | | || || || || || |||||||| ||||| || || ||| Sbjct 18706 CCGCCGCGCAGGCGAAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCC 18647 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | || || || ||| | || | || ||||||||||| ||| Sbjct 18646 AGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCCGGGGGA 18587 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || || || ||||| ||||| || || || | || | || | |||||| || |||||||| Sbjct 18586 ATACCCTCCTTATCCTGAATCTTCTGCTTCA-CGTTCTCGATGGTGTCCGACGACTCGAC 18528 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||||| || || || || | || || || || || ||||| Sbjct 18527 CTCGAGAGTAATAGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 18480 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || || || || ||||| ||||| ||||| || || || Sbjct 18481 ATACCACCGCGCAGGCGGAGGACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCA 18422 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| || || | || || || ||| | || | || ||||||||||| Sbjct 18421 GCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGG 18362 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || || || || || || || || || |||| || | || | ||||| |||||||| Sbjct 18361 GGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGA-CGTTCTCAATAGTGTCCGAAGACTC 18303 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| || | || ||||| || || || || || || |||||||| Sbjct 18302 GACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATTTGCAT 18252 >seq2145 Length=7803 Score = 86.0 bits (94), Expect = 6e-12 Identities = 162/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | || || || || || || ||||| ||||| || || ||| Sbjct 2651 CCGCCGCGGAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 2592 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | || || || ||| | || | || ||||||||||| || Sbjct 2591 AAGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCCGGGGGG 2532 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || || || || || || || || || || | || | || | |||||||| |||||||| Sbjct 2531 ATACCCTCCTTGTCCTGGATCTTCTGCTTCA-CGTTCTCGATCGTGTCGGACGACTCGAC 2473 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||||| |||| ||| || || || || ||||| || || || ||||| ||| || Sbjct 2472 CTCGAGCGTAATCGTCTTACCCGTAAGGGTTTTCACGAAGATCTGCATGCCGCCAC 2417 >seq5693 Length=7660 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||| ||||| || || ||| | ||| || || Sbjct 3000 ACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCG 2941 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || ||| | || | || ||||||||||| || ||||| || || || || Sbjct 2940 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 2881 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || || || | || | || | |||||| || |||||||| ||||| |||| || || Sbjct 2880 ATCTTCTGCTTCA-CGTTCTCAATGGTGTCCGAGGACTCGACCTCGAGCGTAATGGTCTT 2822 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || || || || || || ||||| Sbjct 2821 GCCGGTGAGGGTCTTCACGAAGATCTGCAT 2792 >seq412 Length=117542 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||| ||||| || || ||| | ||| || || Sbjct 114101 ACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCG 114160 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || ||| | || | || ||||||||||| || ||||| || || || || Sbjct 114161 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 114220 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || || || | || | || | |||||| || |||||||| ||||| |||| || || Sbjct 114221 ATCTTCTGCTTCA-CGTTCTCAATGGTGTCCGAGGACTCGACCTCGAGCGTAATGGTCTT 114279 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||| || ||||| || || || || ||||| ||| || Sbjct 114280 GCCAGTCAGAGTCTTGACGAAGATCTGCATACCGCCAC 114317 Score = 82.4 bits (90), Expect = 7e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | || | || ||||||||||| || || || || || || ||||| Sbjct 114392 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATC 114451 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || || || | || | || | |||||| || |||||||| ||||| |||| || ||||| Sbjct 114452 TTCTGCTTCA-CGTTCTCAATGGTGTCCGAGGACTCGACCTCGAGCGTAATGGTCTTGCC 114510 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || || || || || ||||| Sbjct 114511 GGTGAGGGTCTTCACGAAGATCTGCAT 114537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451942501620280