Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002179805.1_202017-06- 08] 10,743 sequences; 75,569,356 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq404 89.7 2e-12 >seq404 Length=26703 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| ||||| ||||||||||| || || || || || Sbjct 18480 ATGCAGATCTTCGTCAAGACCTTGACGGGTAAGACTATTACTCTCGAGGTCGAGTCGTCG 18539 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || || || ||||| |||||||| || ||||| || || || Sbjct 18540 GACACCATCGAGAACGTGAAGCAGAAGATTCAGGATAAGGAGGGTATTCCCCCGGACCAG 18599 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | |||||| | || || || ||||| || || | || |||| || || || Sbjct 18600 CAGCGCCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACCCTGGCCGACTACAAC 18659 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || || ||| Sbjct 18660 ATCCAGAAGGAATCGACTCTCCAC 18683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975446452858244