Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002179805.1_202017-06- 08] 10,743 sequences; 75,569,356 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3619 291 9e-74 seq79 291 9e-74 seq7035 134 2e-26 seq4450 132 5e-26 seq594 132 5e-26 seq6041 102 9e-17 seq4549 91.5 2e-13 seq834 91.5 2e-13 >seq3619 Length=11060 Score = 291 bits (322), Expect = 9e-74 Identities = 504/722 (70%), Gaps = 14/722 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||||| || ||| | ||| | ||| ||| || | | ||| ||| ||||| ||| Sbjct 7167 TCATGCGTGTTGCCGTCGGTCTTCACATGGACAACATCCCCGCC-GTCATCGAGACCTAC 7225 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 ||||| | ||| || ||| || ||||||||||| ||||| |||||||| || || Sbjct 7226 GACTTGCTCTCGCAACAGCTCTTCACCCACGCCACGCCCACCCTCTTCAACGCCGGCACC 7285 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | ||| ||| | ||| |||||||| | | |||||||| ||||||||||| || Sbjct 7286 CCCCGCCCACAGCTTTCGTCGTGCTTCCTCCTCACCATGAAGGAGGACTCGATCGAGGGT 7345 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| ||||||||| |||| |||| ||||||||||| | || |||||||| || Sbjct 7346 ATCTACGACACGCTCAAGCAGTGCGCCCTCATCTCCAAGTCAGCTGGCGGTATCGGCGTC 7405 Query 53432 CACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489 |||| | | || |||| || | | | || || || |||||| | | Sbjct 7406 G-CTGCCC-ACCGCATCCGCGCCTCCAACTCGTACATTCGCGGCACCAACGGCACCTCGA 7463 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | || |||| || ||||| ||||||| |||| |||| ||||| |||||| ||||||| | Sbjct 7464 ACGGTCTCGTCCCGATGCTGCGCGTCTACAACGACACTGCCCGCTACGTCGACCAGGGCG 7523 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | || ||||||||||| | || |||||||| ||||||||||||||||||||||| | | Sbjct 7524 GCGGCAAGCGCAAGGGCGCCTTTGCCATCTATCTCGAGCCGTGGCACGCCGACATCTTTG 7583 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-T 53668 | ||| | ||||| ||| || || | || |||| ||| || ||||| || | Sbjct 7584 ACTTTTTGGAGCTCAAGAAGAACCACGGCAAGGAGGAGAACCGCGCTCGCGACCTCTTCT 7643 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||||||| || |||||||||||| | || ||| | || || |||| Sbjct 7644 ACGGC-CTGTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGTCTGGCGGCGACTGGTCG 7702 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTC---TACGGTGAGGAGTTTAAC 53785 || | ||||| |||||| |||||||| | || | | || |||||||| | Sbjct 7703 CTCTTCTGCCCCAACGAGGCGCCCGGCCT---GTTTGACTCGTGGGGCAAGGAGTTTGAG 7759 Query 53786 GAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845 |||| |||| | |||| | |||||||| | | ||||||||| | ||| Sbjct 7760 GAGAAGTATGAGCGCTACGAGCTGGAGGGCCGCGCCCGCCGGGTGGTCAAGGCCCAGGAG 7819 Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905 | ||| ||| |||||| || ||| | ||||| || ||||| |||||| ||||||| Sbjct 7820 CTCTGGTTTGCGATCCTCGAGTCGCAGATCGAGACTGGCACGCCCTACATGCTCTACAAG 7879 Query 53906 GA 53907 || Sbjct 7880 GA 7881 Score = 232 bits (256), Expect = 7e-56 Identities = 544/808 (67%), Gaps = 26/808 (3%) Strand=Plus/Plus Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAA 55197 |||||| ||| ||| ||||||| || ||||||||| | ||| |||| || || Sbjct 8077 GAACCTCAACAAGGTGATCGACATCAACTACTACCCGGTGCCCGAGGCCCGCACCTCGAA 8136 Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCT 55257 || || ||||| ||||||| ||| || || |||||| |||||||| |||||||||| || Sbjct 8137 CCAGCGCCACCGCCCCATCGGCATTGGCGTGCAGGGCCTGGCCGACGTCTTCATGATCCT 8196 Query 55258 CGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCA 55316 | || | || || || || || | |||| | |||||| || | || Sbjct 8197 GCGTCACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCGCGCCATCTTTGAGAC-CA 8255 Query 55317 TCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGA 55376 |||||| ||| || || || ||| | ||||| | |||||| |||||||||| Sbjct 8256 TCTACTATGCCGCTTGCGTGGCCTCGAACGAGCTGGCCCAGGTCGAGGGCACCTACGAGA 8315 Query 55377 CGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGCAA----- 55431 | | || | ||||| || ||||| || ||| ||| || |||||| Sbjct 8316 CCTACCCCGGCTCGCCGGCCTCGAAGGGCAAGCTGCAGCCCGACCTCTGGGGCGTCGTCC 8375 Query 55432 -GTCTGACCCCATGTTTG-ACAAGTTGAA---GCATG---ACATTCACTTGTGGGGCCTA 55483 ||| |||| ||| | || | | || | ||||| | ||||| Sbjct 8376 CGTCGGACC----GTTGGGACTGGGCCACTCTGCGCGCCAACATTGCCCGCCACGGCCTC 8431 Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| |||||||| ||||| ||||| || |||||||| | |||||| | |||||| Sbjct 8432 CGCAACTCGCTGCTCGTCGCGCCCATGCCGACTGCGTCGACCTCGCAGATCCTCGGCAAC 8491 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| || ||||| |||||||||||||||||| |||||| | ||| || || || Sbjct 8492 AACGAGTGCTTTGAGCCCTACACGACCAACATCTACACGCGCCGCATCCTGGCCGGCGAC 8551 Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663 || | ||||| ||||||| | || || ||| | | | ||| |||| Sbjct 8552 TTCACGGTCGTCAACGAGCACCTGTTGCGCGAGCTCCAGCTGCGCGGCCTCTGGTCCCCG 8611 Query 55664 CAGATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCA--GAATC-TGGAGATTCCT 55720 ||| |||||| | | || | | || || || ||||| | ||| ||||| ||| Sbjct 8612 CAGCTCAAGAACAAGCTCGTCCAGCACAACGGCTCGGTCCAGCGCATCGACGAGATCCCT 8671 Query 55721 CTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTC-TGATTG 55778 || | ||||| || | ||| |||||| |||||| | || ||| | ||| | || | Sbjct 8672 -GACGACATCAAGAAGCTCTACAAGACGGTATGGGAGCTGCCCCAG-CGCGTCATCATCG 8729 Query 55779 ACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGG 55838 ||||| || || || || |||||||||||| |||||| || ||| ||| ||||| Sbjct 8730 ACATGGCCGCCGACCGCTCGGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGG 8789 Query 55839 AGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCA 55898 | || || | |||||| | | |||||||||||| |||| ||| ||||| |||| Sbjct 8790 GCGAGCCCTCGTTTGCCAAGCTCACCTCGATGCACTTCTACGCCTGGCGCAAGGGCCTCA 8849 Query 55899 AGACGGGTATGTACTATCTGCGGACCCG 55926 ||||||| |||||||| ||||| ||||| Sbjct 8850 AGACGGGCATGTACTACCTGCGCACCCG 8877 >seq79 Length=69635 Score = 291 bits (322), Expect = 9e-74 Identities = 504/722 (70%), Gaps = 14/722 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||||| || ||| | ||| | ||| ||| || | | ||| ||| ||||| ||| Sbjct 65671 TCATGCGTGTTGCCGTCGGTCTTCACATGGACAACATCCCCGCC-GTCATCGAGACCTAC 65729 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 ||||| | ||| || ||| || |||||||| || ||||| |||||||| || || Sbjct 65730 GACTTGCTCTCGCAACAGCTCTTCACCCACGCCACACCCACCCTCTTCAACGCCGGCACC 65789 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | ||| ||| | ||| |||||||| | | |||||||| ||||||||||| || Sbjct 65790 CCCCGCCCGCAGCTTTCGTCGTGCTTCCTCCTCACCATGAAGGAGGACTCGATCGAGGGT 65849 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| ||||||||| |||| |||| ||||||||||| | || |||||||| || Sbjct 65850 ATCTACGACACGCTCAAGCAGTGCGCCCTCATCTCCAAGTCAGCTGGCGGTATCGGCGTC 65909 Query 53432 CACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489 |||| | | || |||| || | | | || || || |||||| | | Sbjct 65910 G-CTGCCC-ACCGCATCCGCGCCTCCAACTCGTACATTCGCGGCACCAACGGCACCTCGA 65967 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | || |||| || ||||| ||||||| |||| |||| ||||| |||||| ||||||| | Sbjct 65968 ACGGTCTCGTCCCGATGCTGCGCGTCTACAACGACACTGCCCGCTACGTCGACCAGGGCG 66027 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | || ||||||||||| | || |||||||||||||||||||||||||||||||| | | Sbjct 66028 GCGGCAAGCGCAAGGGCGCCTTTGCCATCTACCTCGAGCCGTGGCACGCCGACATCTTTG 66087 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-T 53668 | ||| | ||||| ||| || || | || |||| ||| || ||||| || | Sbjct 66088 ACTTTTTGGAGCTCAAGAAGAACCACGGCAAGGAGGAGAACCGCGCTCGCGACCTCTTCT 66147 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||||||| || |||||||||||| | || ||| | || || |||| Sbjct 66148 ACGGC-CTGTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGTCTGGCGGCGACTGGTCG 66206 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTC---TACGGTGAGGAGTTTAAC 53785 || | ||||| |||||| |||||||| | || | | || |||||||| | Sbjct 66207 CTCTTCTGCCCCAACGAGGCGCCCGGCCT---GTTTGACTCGTGGGGCAAGGAGTTTGAG 66263 Query 53786 GAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845 |||| |||| | |||| | |||||||| | | ||||||||| | ||| Sbjct 66264 GAGAAGTATGAGCGCTACGAGCTGGAGGGCCGCGCCCGCCGGGTGGTCAAGGCCCAGGAG 66323 Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905 | ||| ||| |||||| || ||| | ||||| || ||||| |||||| ||||||| Sbjct 66324 CTTTGGTTTGCGATCCTCGAGTCGCAGATCGAGACTGGCACGCCCTACATGCTCTACAAG 66383 Query 53906 GA 53907 || Sbjct 66384 GA 66385 Score = 228 bits (252), Expect = 9e-55 Identities = 544/808 (67%), Gaps = 26/808 (3%) Strand=Plus/Plus Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAA 55197 |||||| ||| ||| ||||||| || ||||||||| | ||| |||| || || Sbjct 66581 GAACCTCAACAAGGTGATCGACATCAACTACTACCCGGTGCCCGAGGCCCGCACCTCGAA 66640 Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCT 55257 || || ||||| ||||||| ||| || || |||||| |||||||| |||||||||| || Sbjct 66641 CCAGCGCCACCGCCCCATCGGCATTGGCGTGCAGGGCCTGGCCGACGTCTTCATGATCCT 66700 Query 55258 CGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCA 55316 | || | || || || || || | |||| | |||||| || | || Sbjct 66701 GCGTCACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCGCGCCATCTTTGAGAC-CA 66759 Query 55317 TCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGA 55376 |||||| ||| || || || ||| | ||||| | |||||| |||||||||| Sbjct 66760 TCTACTATGCCGCTTGCGTGGCCTCGAACGAGCTGGCCCAGGTCGAGGGCACCTACGAGA 66819 Query 55377 CGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCTG 55436 | | || | ||||| || ||||| || ||| ||| || ||||| ||| Sbjct 66820 CCTACCCCGGCTCGCCGGCCTCGAAGGGCAAGCTGCAGCCCGACCTCTGGGGG--GTCGT 66877 Query 55437 ACCCCAT------GTTTG-ACAAGTTGAA---GCATG---ACATTCACTTGTGGGGCCTA 55483 ||||| ||| | || | | || | ||||| | ||||| Sbjct 66878 --CCCATCGGACCGTTGGGACTGGGCCACTCTGCGCGCCAACATTGCCCGCCACGGCCTC 66935 Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| |||||||| ||||| ||||| || || ||||| | |||||| | |||||| Sbjct 66936 CGCAACTCGCTGCTCGTCGCGCCCATGCCGACTGCCTCGACCTCGCAGATCCTCGGCAAC 66995 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| || ||||| |||||||||||||||||| |||||| | ||| || || || Sbjct 66996 AACGAGTGCTTTGAGCCCTACACGACCAACATCTACACGCGCCGCATCCTTGCCGGCGAC 67055 Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663 || | | ||||| ||||||| | || || ||| | | | ||| |||| Sbjct 67056 TTCACCGTCGTCAACGAGCACCTGTTGCGCGAGCTCCAGCTGCGCGGCCTCTGGTCCCCG 67115 Query 55664 CAGATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCA--GAATC-TGGAGATTCCT 55720 ||| |||||| | | || | | || || || ||||| | ||| ||||| ||| Sbjct 67116 CAGCTCAAGAACAAACTCGTCCAGCACAACGGCTCGGTCCAGCGCATCGACGAGATCCCT 67175 Query 55721 CTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTC-TGATTG 55778 || | ||||| || | ||| |||||||||||| | || ||| | ||| | || | Sbjct 67176 -GACGACATCAAGAAGCTCTACAAAACGGTGTGGGAGCTGCCCCAG-CGCGTCATCATCG 67233 Query 55779 ACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGG 55838 ||||| || || || || |||||||||||| |||||| || ||| ||| ||||| Sbjct 67234 ACATGGCCGCCGACCGCTCGGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGG 67293 Query 55839 AGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCA 55898 | || || | |||||| | | |||||||||||| |||| ||| ||||| |||| Sbjct 67294 GCGAGCCCTCGTTTGCCAAGCTCACCTCGATGCACTTCTACGCCTGGCGCAAGGGCCTCA 67353 Query 55899 AGACGGGTATGTACTATCTGCGGACCCG 55926 ||||||| |||||||| ||||| ||||| Sbjct 67354 AGACGGGCATGTACTACCTGCGCACCCG 67381 >seq7035 Length=2989 Score = 134 bits (148), Expect = 2e-26 Identities = 324/486 (67%), Gaps = 11/486 (2%) Strand=Plus/Plus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 ||||| |||||| || || ||||| || ||||| || || |||||| | |||||| || Sbjct 711 GGCCTCTACAACTCTCTACTGGTGGCACCGATGCCCACGGCCTCGACGTCCCAGATCCTG 770 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597 |||||| ||||| |||||| || ||| |||||||| | | | |||| || | Sbjct 771 GGCAACTGCGAGGGGTTCGAACCCTACGCGACCAACCTGTTCAAGCGCATCGTGCTCGGC 830 Query 55598 GGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGG 55657 || || || || || ||||| ||||||||| ||||| | | || ||| Sbjct 831 GGCGACTTCGTGGTGGTCAACCCGCACCTCGTGCGCGACCTCATGCAACTCGGGCTCTGG 890 Query 55658 AACCCGCA---GATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGAG 55714 | || | ||| |||| | || || ||| || ||||| || | | || Sbjct 891 A---CGGACGGGATGAAGAATGCCATCGTTGCCAACCACGGCTCCGTACAAGACATCGAC 947 Query 55715 ---ATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGT 55771 || || | | ||||||| | ||| ||||| |||||||| | ||| | || Sbjct 948 GCCATCCCACAGGACCTCAAGGCCCTCTACAAGACGGCATGGGAGATCTCGCAGC-GTGT 1006 Query 55772 C-TGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT 55830 | | || ||| || || || || || || ||||||||| |||||| || ||| | Sbjct 1007 CATCATCGACCTGGCCGCCGACCGCTCGGCCTATATCGACCAGAGCCAGTCGCTCAACCT 1066 Query 55831 CTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAA 55890 || ||||| | ||| | | |||| | | | || ||||||||||||| ||| || Sbjct 1067 CTACATGGCGGCTCCCACCTTTGCCACGCTCACTTCCATGCACTTTTACGCCTGGCGCAA 1126 Query 55891 GGGACTCAAGACGGGTATGTACTATCTGCGGACCCGCGCCAAGGCCAAGGCGCAACAGGT 55950 ||| |||||||| || |||||||| || || ||| | ||||||||| |||| || ||||| Sbjct 1127 GGGCCTCAAGACTGGCATGTACTACCTCCGCACCAGGGCCAAGGCCCAGGCTCACCAGGT 1186 Query 55951 GACTGT 55956 || || Sbjct 1187 CACCGT 1192 >seq4450 Length=1350 Score = 132 bits (146), Expect = 5e-26 Identities = 143/187 (76%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 117385 CAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGC 117444 || |||||||| || ||||||| || |||| || ||| || || ||||| || Sbjct 122 CACGTTGTTGGATCCGGCAAAGTTCTGGGCCATGTGGACGATGGTCGAGTGGAGCGAGGC 181 Query 117445 CTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCAT 117504 ||| || ||||| || ||||||||||| ||||||||||| |||||||| || |||||||| Sbjct 182 CTCGCCGTGGTGGTAGGCCGTCTGCTCGGCCACGTAGCCGGCCAGCTGCGCGACCTTCAT 241 Query 117505 GTCTGACGT-CAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCA 117563 || | ||| ||| ||| ||||| ||| || |||| ||||||||||| | ||||| | Sbjct 242 CTC-GCCGTGCAGCTTCCGCTTGAAGCACGCGTAAAGGACCTTGCGCTGGCCCGGCTTGA 300 Query 117564 GACCATC 117570 | ||||| Sbjct 301 GGCCATC 307 Score = 104 bits (114), Expect = 3e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 152073 CCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATT 152132 ||| || |||||||| || | ||| |||||| | |||||||| || | || || Sbjct 86 CCGTGTGCCAAACTGGCCGGCGGGGAAGAGGAGCGGCACGTTGTTGGATCCGGCAAAGTT 145 Query 152133 CTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTG 152192 ||| |||| | || || || || || || || |||||||| || |||||||| Sbjct 146 CTGGGCCATGTGGACGATGGTCGAGTGGAGCGAGGCCTCGCCGTGGTGGTAGGCCGTCTG 205 Query 152193 CTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGT-CAGGTTCTTCTTGA 152251 ||| || | ||| || |||| |||||| |||||||| | || ||| ||| ||| ||||| Sbjct 206 CTCGGCCACGTAGCCGGCCAGCTGCGCGACCTTCATCT-CGCCGTGCAGCTTCCGCTTGA 264 Query 152252 GACAGGCGTAAATCACCTTGCGCTGG 152277 || ||||||| |||||||||||| Sbjct 265 AGCACGCGTAAAGGACCTTGCGCTGG 290 Score = 84.2 bits (92), Expect = 2e-11 Identities = 113/157 (72%), Gaps = 8/157 (5%) Strand=Plus/Plus Query 152695 GCCTTGATGACGGGTGTGACCATTGAAA----CAACGAACCCGAGCTCGATCAGCTTCGG 152750 ||||||| || ||| |||| |||| | || || ||| |||||| || ||| Sbjct 897 GCCTTGACGATGGGGGTGA----TGAACTCCTCGACAAAGCCGCGCTCGAGGAGGGCCGG 952 Query 152751 CCAGTACACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGC 152810 |||| || ||||| | ||||| ||| | ||||||||||||||| ||||| | ||| Sbjct 953 CCAGAACCGGTGGAGGAAGTTGATGACGAGGCCCTTGATGTGCGACCCGTCGTGGTCCTG 1012 Query 152811 GTCGGTCATGATCATCAGACGACCGTAGCGCAGGTCA 152847 ||||||||||| ||| | |||||||||||| || Sbjct 1013 GTCGGTCATGAGCATGATCTTGCCGTAGCGCAGGCCA 1049 >seq594 Length=29688 Score = 132 bits (146), Expect = 5e-26 Identities = 143/187 (76%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 117385 CAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGC 117444 || |||||||| || ||||||| || |||| || ||| || || ||||| || Sbjct 21131 CACGTTGTTGGATCCGGCAAAGTTCTGGGCCATGTGGACGATGGTCGAGTGGAGCGAGGC 21190 Query 117445 CTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCAT 117504 ||| || ||||| || ||||||||||| ||||||||||| |||||||| || |||||||| Sbjct 21191 CTCGCCGTGGTGGTAGGCCGTCTGCTCGGCCACGTAGCCGGCCAGCTGCGCGACCTTCAT 21250 Query 117505 GTCTGACGT-CAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCA 117563 || | ||| ||| ||| ||||| ||| || |||| ||||||||||| | ||||| | Sbjct 21251 CTC-GCCGTGCAGCTTCCGCTTGAAGCACGCGTAAAGGACCTTGCGCTGGCCCGGCTTGA 21309 Query 117564 GACCATC 117570 | ||||| Sbjct 21310 GGCCATC 21316 Score = 104 bits (114), Expect = 3e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 152073 CCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATT 152132 ||| || |||||||| || | ||| |||||| | |||||||| || | || || Sbjct 21095 CCGTGTGCCAAACTGGCCGGCGGGGAAGAGGAGCGGCACGTTGTTGGATCCGGCAAAGTT 21154 Query 152133 CTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTG 152192 ||| |||| | || || || || || || || |||||||| || |||||||| Sbjct 21155 CTGGGCCATGTGGACGATGGTCGAGTGGAGCGAGGCCTCGCCGTGGTGGTAGGCCGTCTG 21214 Query 152193 CTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGT-CAGGTTCTTCTTGA 152251 ||| || | ||| || |||| |||||| |||||||| | || ||| ||| ||| ||||| Sbjct 21215 CTCGGCCACGTAGCCGGCCAGCTGCGCGACCTTCATCT-CGCCGTGCAGCTTCCGCTTGA 21273 Query 152252 GACAGGCGTAAATCACCTTGCGCTGG 152277 || ||||||| |||||||||||| Sbjct 21274 AGCACGCGTAAAGGACCTTGCGCTGG 21299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 113/157 (72%), Gaps = 8/157 (5%) Strand=Plus/Plus Query 152695 GCCTTGATGACGGGTGTGACCATTGAAA----CAACGAACCCGAGCTCGATCAGCTTCGG 152750 ||||||| || ||| |||| |||| | || || ||| |||||| || ||| Sbjct 21901 GCCTTGACGATGGGGGTGA----TGAACTCCTCGACAAAGCCGCGCTCGAGGAGGGCCGG 21956 Query 152751 CCAGTACACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGC 152810 |||| || ||||| | ||||| ||| | ||||||||||||||| ||||| | ||| Sbjct 21957 CCAGAACCGGTGGAGGAAGTTGATGACGAGGCCCTTGATGTGCGACCCGTCGTGGTCCTG 22016 Query 152811 GTCGGTCATGATCATCAGACGACCGTAGCGCAGGTCA 152847 ||||||||||| ||| | |||||||||||| || Sbjct 22017 GTCGGTCATGAGCATGATCTTGCCGTAGCGCAGGCCA 22053 >seq6041 Length=3514 Score = 102 bits (112), Expect = 9e-17 Identities = 183/262 (70%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 53273 TTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGC 53332 || || ||||| ||||| ||||| ||||||||||| | | || || ||||| Sbjct 2576 TTCACCCACGCGACGCCGACCCTCTTCAACGCTGGCTTGCCTTTGCCGCAAATGTCTTCG 2635 Query 53333 TGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAG 53392 |||| |||| ||| ||||| || ||||| |||||||||||||| || ||||||||| | Sbjct 2636 TGCTACCTGCTGGACATGAAAGAGGACTCCATCGACGGCATCTATGAAACGCTCAAGAGG 2695 Query 53393 TGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT-CCACTGCTCGAACGTCCGTGC 53451 || || | ||||||| || | | || || ||||| | | ||| | || | || || Sbjct 2696 TGCGCGCTCATCTCCCAGAGTGCTGGCGGCATCGGCCTGGCCGTGCAC-AAGATACGGGC 2754 Query 53452 GAACGG-CACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCC 53510 ||||| | | ||| | || ||||| | || | ||| | || || ||||| | Sbjct 2755 -AACGGACTCTTACATCCGCAGCACCAACGGGACCTCCAACGGACTTGTTCCCATGCTGC 2813 Query 53511 GCGTCTTCAACAACACGGCCCG 53532 | ||||||||| |||| ||||| Sbjct 2814 GTGTCTTCAACGACACTGCCCG 2835 Score = 89.7 bits (98), Expect = 6e-13 Identities = 255/380 (67%), Gaps = 13/380 (3%) Strand=Plus/Plus Query 53546 GGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATT 53605 || ||||| ||||| ||||| | || |||||||| |||||||||||||| |||||||| Sbjct 2967 GGAGGTGGCAAGCGAAAGGGAGCCTTTGCCATCTATCTCGAGCCGTGGCATGCCGACATC 3026 Query 53606 ATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGA--TGCGCTGCCGTGACC 53663 | || || ||||| || ||| || || | || |||| | ||| ||||| | Sbjct 3027 TTCGACTTCCTCGACCTCAAGAAGAACCACGGCAAGGAGGAGAACAGGGCT--CGTGATC 3084 Query 53664 TGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGA- 53721 | || || || |||||||| |||||||| |||||| | || ||| | | || | Sbjct 3085 TTTTCTATGGC-CTGTGGATACCGGACCTGTTCATGAAGCGCGTCGAGGCCGGC-AGCAC 3142 Query 53722 GTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 |||| ||| | ||||| || || || || || |||| |||| || |||| Sbjct 3143 CTGGTCCCTCTTCTGCCCCAATGAAGCGCCAGGGCTACAGGACGTCTGGGGCCGCCAGTT 3202 Query 53782 TAACGAGATGTATCGGACGTA--CGCA-GTTCAGGGCCGCTACAAGAAG-AAGGTCAAGG 53837 | ||| | ||| | || ||| | || ||||| | || | | | |||| | Sbjct 3203 CGAGGAGCTCTATGAGCGCTATGAGCAGGATCCTGGCCG-TGCACGCCGCATCATCAATG 3261 Query 53838 CGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGT 53897 | | ||| | ||| ||| |||||| || ||||||||||| || || ||||||||| Sbjct 3262 CCCAGGAGTTGTGGTTTGCTATCCTCGAGGCTCAGGTGGAGACCGGTACTCCGTACATGC 3321 Query 53898 GCTACAAGGATTCGGTCAAC 53917 |||||| || | |||||| Sbjct 3322 TCTACAAAGACGCCGTCAAC 3341 >seq4549 Length=14715 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 159373 CGAATTGCTTCAAGAATTCGAAGGGTACCCATGGCGTCGACGTTCGCCGTGTACTCGGGC 159432 || || || ||||||| |||||||| |||||||||||||||| || |||||||||| | Sbjct 11518 CGGATAGCCTCAAGAAGACGAAGGGTTCCCATGGCGTCGACGTCGGCAGTGTACTCGGCC 11459 Query 159433 TGCTCAAAAGAGAGCTTCACGTGTGACTGGGCTCCGAGGTTATAGACCTC 159482 ||| || |||| ||||||||| || ||| | | ||| |||||||| Sbjct 11458 ACCTCGAAGGAGACCTTCACGTGGCTTTGCGCTGCCAAGTTGTAGACCTC 11409 >seq834 Length=9014 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 159373 CGAATTGCTTCAAGAATTCGAAGGGTACCCATGGCGTCGACGTTCGCCGTGTACTCGGGC 159432 || || || ||||||| |||||||| |||||||||||||||| || |||||||||| | Sbjct 3869 CGGATAGCCTCAAGAAGACGAAGGGTTCCCATGGCGTCGACGTCGGCAGTGTACTCGGCC 3928 Query 159433 TGCTCAAAAGAGAGCTTCACGTGTGACTGGGCTCCGAGGTTATAGACCTC 159482 ||| || |||| ||||||||| || ||| | | ||| |||||||| Sbjct 3929 ACCTCGAAGGAGACCTTCACGTGGCTTTGCGCTGCCAAGTTGTAGACCTC 3978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547142515731400