Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002179805.1_202017-06- 08] 10,743 sequences; 75,569,356 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq412 104 2e-17 >seq412 Length=117542 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| ||||| || |||||||| ||||| || || || | Sbjct 114081 ATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACGATCACGCTCGAGGTCGAGTCGAGC 114022 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || || ||||| || ||| | || || || || Sbjct 114021 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 113962 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||||||||| || || || |||| || || | | ||| |||||| Sbjct 113961 CAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCCGACTACAAC 113902 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 113901 ATCCAGAAGGAGTCGAC 113885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337965344297444