Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq50985 185 1e-41 seq50789 185 1e-41 seq50610 185 1e-41 seq50609 185 1e-41 seq58068 179 5e-40 seq54405 179 5e-40 seq54404 179 5e-40 >seq50985 Length=2480 Score = 185 bits (204), Expect = 1e-41 Identities = 407/593 (69%), Gaps = 28/593 (5%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| |||||| | | || ||| ||||| |||||||| ||||| |||||||||| Sbjct 219 CTGTTCCCCATCCGCCACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTC 278 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||||| ||| || ||||||||| | ||| || | | |||||| ||| | || Sbjct 279 TGGACGGCCGAGGAAGTCGATCTGAGCTCCGACATGAAGCACTGGGAG--TCGCTCAAC- 335 Query 125115 GAAACTGAGCGAGAG----TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTC-CGATG 125169 ||| || |||||| || || |||| | |||||||||| || |||| ||| | Sbjct 336 --AAC-GA-CGAGAGGCACTTCATCAAGCACGTCCTGGCCTTCTTCGC-GGCTAGCGACG 390 Query 125170 GAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTG 125228 | ||||| ||| ||||| | | | || ||| | ||| | | || |||| | Sbjct 391 GCATCGTGGCCGAGAATCTCGCCGGC-CGCTTCATGAAGGAGGTACAGGTGCCCGAGGCG 449 Query 125229 TCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACA 125288 ||||| ||||| || |||||| || |||||| | ||||| || |||||||| Sbjct 450 CGCTGCTTCTACGGCTTTCAAATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCTC 509 Query 125289 CTGATTGACATGTACATTCGCGATCCGCAACGT----AAACACATGCTCTTTAACGCAAT 125344 || || |||| ||| | || ||| ||| || || ||||| ||| || Sbjct 510 CTCATCGACACCTACGTCAAGGA--CGC--CGTCGAGAAGGACCGCCTCTTCCGCGCCAT 565 Query 125345 CGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGA 125404 ||| || ||||| || | || ||||| | |||| ||| ||||||| | | || Sbjct 566 CGAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGA 625 Query 125405 CAA-GTCTT--CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTT 125461 ||| | | |||||| | || || | |||||||||||| |||||||||||||| Sbjct 626 GGGTGTCGAGACCTTCGCCGAGCGTCTCGTCGGATTCGCCGCCGTCGAGGGCATCTTCTT 685 Query 125462 TTCGGGTAG-TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGA 125520 || || || || ||| ||||||| ||||||||||||||||| ||||||||||| || Sbjct 686 CTCCGGCAGCTTCTGC-TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCG 744 Query 125521 CGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 | |||||||||| | || || || |||||||| ||||| ||||| ||| Sbjct 745 CCTTCAGTAACGAGATGATCAGCCGCGATGAGGGCCTCCACTGCGACTTCGCC 797 >seq50789 Length=2477 Score = 185 bits (204), Expect = 1e-41 Identities = 407/593 (69%), Gaps = 28/593 (5%) Strand=Plus/Minus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| |||||| | | || ||| ||||| |||||||| ||||| |||||||||| Sbjct 2259 CTGTTCCCCATCCGCCACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTC 2200 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||||| ||| || ||||||||| | ||| || | | |||||| ||| | || Sbjct 2199 TGGACGGCCGAGGAAGTCGATCTGAGCTCCGACATGAAGCACTGGGAG--TCGCTCAAC- 2143 Query 125115 GAAACTGAGCGAGAG----TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTC-CGATG 125169 ||| || |||||| || || |||| | |||||||||| || |||| ||| | Sbjct 2142 --AAC-GA-CGAGAGGCACTTCATCAAGCACGTCCTGGCCTTCTTCGC-GGCTAGCGACG 2088 Query 125170 GAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTG 125228 | ||||| ||| ||||| | | | || ||| | ||| | | || |||| | Sbjct 2087 GCATCGTGGCCGAGAATCTCGCCGGC-CGCTTCATGAAGGAGGTACAGGTGCCCGAGGCG 2029 Query 125229 TCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACA 125288 ||||| ||||| || |||||| || |||||| | ||||| || |||||||| Sbjct 2028 CGCTGCTTCTACGGCTTTCAAATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCTC 1969 Query 125289 CTGATTGACATGTACATTCGCGATCCGCAACGT----AAACACATGCTCTTTAACGCAAT 125344 || || |||| ||| | || ||| ||| || || ||||| ||| || Sbjct 1968 CTCATCGACACCTACGTCAAGGA--CGC--CGTCGAGAAGGACCGCCTCTTCCGCGCCAT 1913 Query 125345 CGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGA 125404 ||| || ||||| || | || ||||| | |||| ||| ||||||| | | || Sbjct 1912 CGAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGA 1853 Query 125405 CAA-GTCTT--CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTT 125461 ||| | | |||||| | || || | |||||||||||| |||||||||||||| Sbjct 1852 GGGTGTCGAGACCTTCGCCGAGCGTCTCGTCGGATTCGCCGCCGTCGAGGGCATCTTCTT 1793 Query 125462 TTCGGGTAGTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGA 125520 || || || || ||| ||||||| ||||||||||||||||| ||||||||||| || Sbjct 1792 CTCCGGCAGCTTCTGCT-CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCG 1734 Query 125521 CGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 | |||||||||| | || || || |||||||| ||||| ||||| ||| Sbjct 1733 CCTTCAGTAACGAGATGATCAGCCGCGATGAGGGCCTCCACTGCGACTTCGCC 1681 >seq50610 Length=4059 Score = 185 bits (204), Expect = 1e-41 Identities = 407/593 (69%), Gaps = 28/593 (5%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| |||||| | | || ||| ||||| |||||||| ||||| |||||||||| Sbjct 3128 CTGTTCCCCATCCGCCACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTC 3187 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||||| ||| || ||||||||| | ||| || | | |||||| ||| | || Sbjct 3188 TGGACGGCCGAGGAAGTCGATCTGAGCTCCGACATGAAGCACTGGGAG--TCGCTCAAC- 3244 Query 125115 GAAACTGAGCGAGAG----TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTC-CGATG 125169 ||| || |||||| || || |||| | |||||||||| || |||| ||| | Sbjct 3245 --AAC-GA-CGAGAGGCACTTCATCAAGCACGTCCTGGCCTTCTTCGC-GGCTAGCGACG 3299 Query 125170 GAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTG 125228 | ||||| ||| ||||| | | | || ||| | ||| | | || |||| | Sbjct 3300 GCATCGTGGCCGAGAATCTCGCCGGC-CGCTTCATGAAGGAGGTACAGGTGCCCGAGGCG 3358 Query 125229 TCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACA 125288 ||||| ||||| || |||||| || |||||| | ||||| || |||||||| Sbjct 3359 CGCTGCTTCTACGGCTTTCAAATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCTC 3418 Query 125289 CTGATTGACATGTACATTCGCGATCCGCAACGT----AAACACATGCTCTTTAACGCAAT 125344 || || |||| ||| | || ||| ||| || || ||||| ||| || Sbjct 3419 CTCATCGACACCTACGTCAAGGA--CGC--CGTCGAGAAGGACCGCCTCTTCCGCGCCAT 3474 Query 125345 CGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGA 125404 ||| || ||||| || | || ||||| | |||| ||| ||||||| | | || Sbjct 3475 CGAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGA 3534 Query 125405 CAA-GTCTT--CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTT 125461 ||| | | |||||| | || || | |||||||||||| |||||||||||||| Sbjct 3535 GGGTGTCGAGACCTTCGCCGAGCGTCTCGTCGGATTCGCCGCCGTCGAGGGCATCTTCTT 3594 Query 125462 TTCGGGTAG-TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGA 125520 || || || || ||| ||||||| ||||||||||||||||| ||||||||||| || Sbjct 3595 CTCCGGCAGCTTCTGC-TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCG 3653 Query 125521 CGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 | |||||||||| | || || || |||||||| ||||| ||||| ||| Sbjct 3654 CCTTCAGTAACGAGATGATCAGCCGCGATGAGGGCCTCCACTGCGACTTCGCC 3706 >seq50609 Length=4102 Score = 185 bits (204), Expect = 1e-41 Identities = 407/593 (69%), Gaps = 28/593 (5%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| |||||| | | || ||| ||||| |||||||| ||||| |||||||||| Sbjct 3171 CTGTTCCCCATCCGCCACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTC 3230 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||||| ||| || ||||||||| | ||| || | | |||||| ||| | || Sbjct 3231 TGGACGGCCGAGGAAGTCGATCTGAGCTCCGACATGAAGCACTGGGAG--TCGCTCAAC- 3287 Query 125115 GAAACTGAGCGAGAG----TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTC-CGATG 125169 ||| || |||||| || || |||| | |||||||||| || |||| ||| | Sbjct 3288 --AAC-GA-CGAGAGGCACTTCATCAAGCACGTCCTGGCCTTCTTCGC-GGCTAGCGACG 3342 Query 125170 GAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTG 125228 | ||||| ||| ||||| | | | || ||| | ||| | | || |||| | Sbjct 3343 GCATCGTGGCCGAGAATCTCGCCGGC-CGCTTCATGAAGGAGGTACAGGTGCCCGAGGCG 3401 Query 125229 TCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACA 125288 ||||| ||||| || |||||| || |||||| | ||||| || |||||||| Sbjct 3402 CGCTGCTTCTACGGCTTTCAAATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCTC 3461 Query 125289 CTGATTGACATGTACATTCGCGATCCGCAACGT----AAACACATGCTCTTTAACGCAAT 125344 || || |||| ||| | || ||| ||| || || ||||| ||| || Sbjct 3462 CTCATCGACACCTACGTCAAGGA--CGC--CGTCGAGAAGGACCGCCTCTTCCGCGCCAT 3517 Query 125345 CGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGA 125404 ||| || ||||| || | || ||||| | |||| ||| ||||||| | | || Sbjct 3518 CGAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGA 3577 Query 125405 CAA-GTCTT--CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTT 125461 ||| | | |||||| | || || | |||||||||||| |||||||||||||| Sbjct 3578 GGGTGTCGAGACCTTCGCCGAGCGTCTCGTCGGATTCGCCGCCGTCGAGGGCATCTTCTT 3637 Query 125462 TTCGGGTAG-TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGA 125520 || || || || ||| ||||||| ||||||||||||||||| ||||||||||| || Sbjct 3638 CTCCGGCAGCTTCTGC-TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCG 3696 Query 125521 CGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 | |||||||||| | || || || |||||||| ||||| ||||| ||| Sbjct 3697 CCTTCAGTAACGAGATGATCAGCCGCGATGAGGGCCTCCACTGCGACTTCGCC 3749 >seq58068 Length=5899 Score = 179 bits (198), Expect = 5e-40 Identities = 332/483 (69%), Gaps = 8/483 (2%) Strand=Plus/Minus Query 96897 GGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATG 96956 || ||| | ||| ||||| | || || |||||||||||| | |||||||| |||| || Sbjct 4937 GGTGCTTTCGCCATCTACCTTGAGCCCTGGCACGCGGACATCTTTGACTTCCTCGACCTG 4878 Query 96957 CGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTG 97016 || ||| ||| || ||| || ||| | || | || || | || ||| | Sbjct 4877 AAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTGTGGATT 4818 Query 97017 CCAGATTTGTTCATGAAGCGCGTCAACGAC-GGTGGCTACTGGAGCCTAATGTGCCCCGA 97075 || || |||||||||||||||| | ||| || ||| ||||| || | |||||| | Sbjct 4817 CCCGACCTGTTCATGAAGCGCGTGGA-GACTGGCGGCGACTGGTCGCTCTTTTGCCCCAA 4759 Query 97076 CTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTA 97135 | | | ||||| |||| ||| | |||||| | ||||| |||| |||||| | ||| Sbjct 4758 CGAGGCCCCCGGCCTGTTCGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAGCGCTA 4699 Query 97136 CGAGCAAGAGGGCCGATACGTGAGACG---AGTCGATGCACGAGAACTGTGGAAGGCCAT 97192 |||||| |||||||| || | | || ||| | || | || |||||| ||||| Sbjct 4698 CGAGCAGGAGGGCCG---CGCGCGCCGCGTGGTCAAGGCCCAGGAGCTGTGGTTCGCCAT 4642 Query 97193 CGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCG 97252 | | | | ||| | ||||| || || || ||||| || |||||||| || || | Sbjct 4641 CCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTGCAACGG 4582 Query 97253 CAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGT 97312 ||| |||||| | ||| | ||||||||| || || || ||||||||||| | || Sbjct 4581 CAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGAGGTCGT 4522 Query 97313 AGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAA 97372 ||||| | || || |||||| ||| || ||| ||||| ||| || |||||||| Sbjct 4521 CCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTGGCCTCGCTCGCGCTGCCCAA 4462 Query 97373 GTT 97375 ||| Sbjct 4461 GTT 4459 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/226 (70%), Gaps = 8/226 (4%) Strand=Plus/Minus Query 98040 TACAAGACTGTCTGGGAGATTCCG-ACCAAGACGCTGATCGATATGGCTGCCGACAGAGG 98098 |||||||| || |||||| | ||| | | | | | ||||| ||||| ||||| | Sbjct 3785 TACAAGACCGTGTGGGAGCTCCCGCAGCGCGTCA-TCATCGACATGGCCGCCGATCGCTC 3727 Query 98099 TGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTA---CAG 98155 | |||||| |||||||| || ||| |||| | ||| | | ||||||| | | || Sbjct 3726 GGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCCTCGTTTGCCAA 3667 Query 98156 TCGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTA 98215 | | || ||||| ||||| ||||| ||| ||||||||||||||| ||||||||||| Sbjct 3666 GC---TCACCTCGATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTA 3610 Query 98216 TCTGAGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261 || | || | | ||| |||| || || | || || || ||| Sbjct 3609 CCTTCGCACCCGGCCCGCCGCCAACGCGATCCAGTTCACCGTCGAC 3564 >seq54405 Length=5848 Score = 179 bits (198), Expect = 5e-40 Identities = 332/483 (69%), Gaps = 8/483 (2%) Strand=Plus/Plus Query 96897 GGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATG 96956 || ||| | ||| ||||| | || || |||||||||||| | |||||||| |||| || Sbjct 4331 GGTGCTTTCGCCATCTACCTTGAGCCCTGGCACGCGGACATCTTTGACTTCCTCGACCTG 4390 Query 96957 CGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTG 97016 || ||| ||| || ||| || ||| | || | || || | || ||| | Sbjct 4391 AAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTGTGGATT 4450 Query 97017 CCAGATTTGTTCATGAAGCGCGTCAACGAC-GGTGGCTACTGGAGCCTAATGTGCCCCGA 97075 || || |||||||||||||||| | ||| || ||| ||||| || | |||||| | Sbjct 4451 CCCGACCTGTTCATGAAGCGCGTGGA-GACTGGCGGCGACTGGTCGCTCTTTTGCCCCAA 4509 Query 97076 CTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTA 97135 | | | ||||| |||| ||| | |||||| | ||||| |||| |||||| | ||| Sbjct 4510 CGAGGCCCCCGGCCTGTTCGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAGCGCTA 4569 Query 97136 CGAGCAAGAGGGCCGATACGTGAGACG---AGTCGATGCACGAGAACTGTGGAAGGCCAT 97192 |||||| |||||||| || | | || ||| | || | || |||||| ||||| Sbjct 4570 CGAGCAGGAGGGCCG---CGCGCGCCGCGTGGTCAAGGCCCAGGAGCTGTGGTTCGCCAT 4626 Query 97193 CGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCG 97252 | | | | ||| | ||||| || || || ||||| || |||||||| || || | Sbjct 4627 CCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTGCAACGG 4686 Query 97253 CAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGT 97312 ||| |||||| | ||| | ||||||||| || || || ||||||||||| | || Sbjct 4687 CAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGAGGTCGT 4746 Query 97313 AGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAA 97372 ||||| | || || |||||| ||| || ||| ||||| ||| || |||||||| Sbjct 4747 CCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTGGCCTCGCTCGCGCTGCCCAA 4806 Query 97373 GTT 97375 ||| Sbjct 4807 GTT 4809 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/226 (70%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 98040 TACAAGACTGTCTGGGAGATTCCG-ACCAAGACGCTGATCGATATGGCTGCCGACAGAGG 98098 |||||||| || |||||| | ||| | | | | | ||||| ||||| ||||| | Sbjct 5483 TACAAGACCGTGTGGGAGCTCCCGCAGCGCGTCA-TCATCGACATGGCCGCCGATCGCTC 5541 Query 98099 TGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTA---CAG 98155 | |||||| |||||||| || ||| |||| | ||| | | ||||||| | | || Sbjct 5542 GGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCCTCGTTTGCCAA 5601 Query 98156 TCGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTA 98215 | | || ||||| ||||| ||||| ||| ||||||||||||||| ||||||||||| Sbjct 5602 GC---TCACCTCGATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTA 5658 Query 98216 TCTGAGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261 || | || | | ||| |||| || || | || || || ||| Sbjct 5659 CCTTCGCACCCGGCCCGCCGCCAACGCGATCCAGTTCACCGTCGAC 5704 >seq54404 Length=5758 Score = 179 bits (198), Expect = 5e-40 Identities = 332/483 (69%), Gaps = 8/483 (2%) Strand=Plus/Plus Query 96897 GGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATG 96956 || ||| | ||| ||||| | || || |||||||||||| | |||||||| |||| || Sbjct 4241 GGTGCTTTCGCCATCTACCTTGAGCCCTGGCACGCGGACATCTTTGACTTCCTCGACCTG 4300 Query 96957 CGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTG 97016 || ||| ||| || ||| || ||| | || | || || | || ||| | Sbjct 4301 AAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTGTGGATT 4360 Query 97017 CCAGATTTGTTCATGAAGCGCGTCAACGAC-GGTGGCTACTGGAGCCTAATGTGCCCCGA 97075 || || |||||||||||||||| | ||| || ||| ||||| || | |||||| | Sbjct 4361 CCCGACCTGTTCATGAAGCGCGTGGA-GACTGGCGGCGACTGGTCGCTCTTTTGCCCCAA 4419 Query 97076 CTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTA 97135 | | | ||||| |||| ||| | |||||| | ||||| |||| |||||| | ||| Sbjct 4420 CGAGGCCCCCGGCCTGTTCGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAGCGCTA 4479 Query 97136 CGAGCAAGAGGGCCGATACGTGAGACG---AGTCGATGCACGAGAACTGTGGAAGGCCAT 97192 |||||| |||||||| || | | || ||| | || | || |||||| ||||| Sbjct 4480 CGAGCAGGAGGGCCG---CGCGCGCCGCGTGGTCAAGGCCCAGGAGCTGTGGTTCGCCAT 4536 Query 97193 CGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCG 97252 | | | | ||| | ||||| || || || ||||| || |||||||| || || | Sbjct 4537 CCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTGCAACGG 4596 Query 97253 CAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGT 97312 ||| |||||| | ||| | ||||||||| || || || ||||||||||| | || Sbjct 4597 CAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGAGGTCGT 4656 Query 97313 AGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAA 97372 ||||| | || || |||||| ||| || ||| ||||| ||| || |||||||| Sbjct 4657 CCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTGGCCTCGCTCGCGCTGCCCAA 4716 Query 97373 GTT 97375 ||| Sbjct 4717 GTT 4719 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/226 (70%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 98040 TACAAGACTGTCTGGGAGATTCCG-ACCAAGACGCTGATCGATATGGCTGCCGACAGAGG 98098 |||||||| || |||||| | ||| | | | | | ||||| ||||| ||||| | Sbjct 5393 TACAAGACCGTGTGGGAGCTCCCGCAGCGCGTCA-TCATCGACATGGCCGCCGATCGCTC 5451 Query 98099 TGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTA---CAG 98155 | |||||| |||||||| || ||| |||| | ||| | | ||||||| | | || Sbjct 5452 GGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCCTCGTTTGCCAA 5511 Query 98156 TCGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTA 98215 | | || ||||| ||||| ||||| ||| ||||||||||||||| ||||||||||| Sbjct 5512 GC---TCACCTCGATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTA 5568 Query 98216 TCTGAGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261 || | || | | ||| |||| || || | || || || ||| Sbjct 5569 CCTTCGCACCCGGCCCGCCGCCAACGCGATCCAGTTCACCGTCGAC 5614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740434311092840