Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq33364 114 1e-20 seq67000 107 2e-18 seq47541 107 2e-18 seq64861 105 6e-18 seq61750 105 6e-18 seq33763 105 6e-18 seq63834 104 2e-17 seq63448 102 7e-17 seq37491 102 7e-17 seq64025 100 2e-16 seq55626 96.9 3e-15 seq50178 87.8 2e-12 seq43205 86.0 5e-12 seq38151 86.0 5e-12 seq20806 84.2 2e-11 seq54486 82.4 6e-11 >seq33364 Length=844 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 ||||| || |||||| || |||||||| || |||| | || || ||||||| ||||| Sbjct 230 TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGC-CGTCCTCGAGCTG 288 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || || | || | |||||||||||| || | | ||||||||| || || Sbjct 289 CTTGCCAGCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTT 348 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 |||||| | | | ||||||||| | ||||| ||||| || ||||| || ||||| Sbjct 349 CTGCTTCACGTTCTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 408 Query 48703 GAGAGTTTTCACAAAAATCTGCATCGT 48729 ||| || ||||| || |||||||| || Sbjct 409 GAGGGTCTTCACGAAGATCTGCATTGT 435 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || |||| || ||||||| ||||||||||| || | Sbjct 13 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 72 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | |||||||| || || | || ||||||||| || |||||||| | Sbjct 73 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 132 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | | || || |||| ||||| ||||| || || || || || ||||| || || || Sbjct 133 CTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTGAC 192 Query 48715 AAAAATCTGCAT 48726 || |||||||| Sbjct 193 GAAGATCTGCAT 204 >seq67000 Length=10850 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || || | || ||||||| ||||||||||| || | Sbjct 1214 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 1273 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||||||||||| || | || ||||||||| ||| || ||||||| Sbjct 1274 GATGAGGCGCTGCTGATCGGGAGGAATACCCTCCTTGTCCTGAATCTTTTGCTTGACGTT 1333 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | | ||||||||| | ||||| ||||| || ||||| || ||||| || || || || Sbjct 1334 CTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 1393 Query 48715 AAAAATCTGCATCGTGT 48731 || |||||||||| || Sbjct 1394 GAAGATCTGCATCGCGT 1410 >seq47541 Length=1677 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || |||| || ||||||| |||||||| || || | Sbjct 1420 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 1479 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||||||||||||| || | || ||||||||| || |||||||||| Sbjct 1480 GATAAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 1539 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | | || || |||| ||||| ||||| || ||||| || |||||||| || || || Sbjct 1540 CTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGAC 1599 Query 48715 AAAAATCTGCAT 48726 || |||||||| Sbjct 1600 GAAGATCTGCAT 1611 >seq64861 Length=3609 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| || |||| || ||||||| |||||| Sbjct 698 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 757 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 ||||| || | || | ||||||||||||| || | | ||||||||| || || Sbjct 758 TTACCCGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTT 817 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | | ||||||||| | ||||| ||||| || ||||| || ||||| Sbjct 818 TGCTTCACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGGGTAATGGTCTTGCCGGTC 877 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || || || || || |||||||| Sbjct 878 AGCGTCTTGACGAAGATCTGCAT 900 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 ||||||||| |||||||| || || | || ||||||| ||||||||||| || | Sbjct 1715 CTCCTTTTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTACCCGCGAA 1774 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | |||||||| ||| || | | |||||||||| ||| || ||||| | Sbjct 1775 GATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGAATCTTTTGCTTCACGTT 1834 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | | ||||| || | ||| ||||| || ||||| || ||||| || || || || Sbjct 1835 CTCGATGGTGTCAGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTGAC 1894 Query 48715 AAAAATCTGCAT 48726 || |||||||| Sbjct 1895 GAAGATCTGCAT 1906 >seq61750 Length=9220 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| || |||| || ||||||| |||||| Sbjct 3991 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 4050 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 ||||| || | || | ||||||||| || || | | |||||||||| ||| || Sbjct 4051 TTACCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCTTT 4110 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | | ||||| ||| | ||||| ||| | || ||||| || |||||| Sbjct 4111 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCCAGGGTGATGGTCTTGCCGGTG 4170 Query 48704 AGAGTTTTCACAAAAATCTGCATCGT 48729 || || ||||| || |||||||| || Sbjct 4171 AGGGTCTTCACGAAGATCTGCATTGT 4196 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 || || ||| |||||| || |||||||| ||||||| | || || ||||||| ||||| Sbjct 3535 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGGC-CGTCCTCGAGCTG 3593 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| || | || | ||||||||| ||| || | | |||||||||| || || Sbjct 3594 CTTACCCGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTT 3653 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 |||||||| | | || || |||| ||| ||||| || || || ||||| || Sbjct 3654 CTGCTTGACGTTCTCGATCGTGTCGGAGCTCTCAACCTCGAGGGTGATCGTCTTACCCGT 3713 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||| || || || || |||||||| Sbjct 3714 GAGCGTCTTGACGAAGATCTGCAT 3737 >seq33763 Length=823 Score = 105 bits (116), Expect = 6e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| ||| |||||| || |||||||| || || | || ||||||| |||||| Sbjct 206 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 265 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 ||||| || | || | ||||||||||| || | | ||||||||| ||| || Sbjct 266 TTACCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTT 325 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | | ||||| ||| | ||||| ||||| || ||||| || |||||| Sbjct 326 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTG 385 Query 48704 AGAGTTTTCACAAAAATCTGCATCGTGT 48731 || || || || || |||||||||| || Sbjct 386 AGGGTCTTGACGAAGATCTGCATCGCGT 413 Score = 82.4 bits (90), Expect = 6e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 48547 GTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTG 48606 |||||| || |||| || ||||||| |||||||| || || | || | |||||| Sbjct 1 GTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTG 60 Query 48607 CTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATC 48666 |||||| || | || ||||||||| || |||||||| | | | || || || Sbjct 61 CTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTTACGTTCTCGATCGTGTC 120 Query 48667 GGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| ||||| || || || ||||| ||||| || || || || |||||||| Sbjct 121 GGACGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 180 >seq63834 Length=75625 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || ||||||| | | ||| | ||||| || |||||| || |||||||| || ||| Sbjct 69172 CCGCCGCGCAGACGAAGCACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 69231 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || ||||||| |||||||| ||| || | || | ||||||||||| || Sbjct 69232 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGGA 69291 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || |||||||||| || |||||||| | | | ||||| ||| | ||||| | Sbjct 69292 ATACCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 69351 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || || || || ||||| || || || || || |||||||| Sbjct 69352 TCGAGAGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 69398 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| ||||||| || ||||||| |||||| Sbjct 68740 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCAAGCTGC 68799 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 ||||| || | || | |||||||| || || | | |||||||||| || ||| Sbjct 68800 TTACCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTC 68859 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | | || || |||| ||||| ||||| || || || || || ||| Sbjct 68860 TGCTTCACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTG 68919 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || || ||||| || |||||||| Sbjct 68920 AGGGTCTTCACGAAGATCTGCAT 68942 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || || | || | ||||| |||||||| ||| || | Sbjct 68979 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 69038 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||||||||||| || | | ||||||||| ||| |||||||| | Sbjct 69039 GATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 69098 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | | ||||||||| | ||||| ||||| || || || |||||||| || || || || Sbjct 69099 CTCGATGGTATCGCTGGACTCGACCTCGAGGGTAATCGTCTTACCGGTAAGGGTCTTGAC 69158 Query 48715 AAAAATCTGCAT 48726 || |||||||| Sbjct 69159 GAAGATCTGCAT 69170 >seq63448 Length=5210 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| || || | || ||||||| |||||| Sbjct 3726 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGC 3667 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 ||||| || | || | ||||||||| ||| || | | ||||||||| || ||| Sbjct 3666 TTACCCGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 3607 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | | || || ||| | ||||| ||||| || ||||| || |||||| Sbjct 3606 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCTACCTCGAGGGTGATGGTCTTGCCGGTG 3547 Query 48704 AGAGTTTTCACAAAAATCTGCATCGT 48729 || || ||||| || |||||||| || Sbjct 3546 AGGGTCTTCACGAAGATCTGCATTGT 3521 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| || |||||| || |||||||| || || | || ||||||| |||||| Sbjct 3954 TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGC 3895 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 ||||| || | || | ||||||||||| || | | ||||||||| || ||| Sbjct 3894 TTACCCGCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 3835 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | | ||||||||| | ||||| ||||| || || || || || ||| Sbjct 3834 TGCTTCACGTTCTCGATGGTATCGCTGGACTCGACCTCGAGAGTAATAGTCTTGCCCGTG 3775 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || || || || || |||||||| Sbjct 3774 AGGGTCTTGACGAAGATCTGCAT 3752 >seq37491 Length=1671 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| || |||| || ||||||| |||||| Sbjct 401 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 460 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || || | || | |||||||||||| || | | ||||||||| ||| || Sbjct 461 TTGCCCGCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTT 520 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | | || || ||| | ||||| ||||| || ||||| || |||||| Sbjct 521 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTAATGGTCTTGCCGGTG 580 Query 48704 AGAGTTTTCACAAAAATCTGCATCGT 48729 || || ||||| || |||||||| || Sbjct 581 AGGGTCTTCACGAAGATCTGCATGGT 606 >seq64025 Length=5555 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 || || ||| |||||| || |||||||| ||||||| | || || ||||||| ||||| Sbjct 1053 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGGC-CGTCCTCGAGCTG 1111 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| || | || | ||||||||| ||| || | | |||||||||| || || Sbjct 1112 CTTACCCGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTT 1171 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 |||||||| | | || || || | ||| ||||| || || || ||||| || Sbjct 1172 CTGCTTGACGTTCTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATAGTCTTACCCGT 1231 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||| || || || || |||||||| Sbjct 1232 GAGGGTCTTGACGAAGATCTGCAT 1255 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| ||| |||||| || |||||||| || || | | || ||||||| |||||| Sbjct 1509 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGTGTACGGCCGTCCTCGAGCTGC 1568 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || || | || | |||||||||||| || | | ||||||||| || || Sbjct 1569 TTGCCCGCGAAGATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTT 1628 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | | ||||| ||| | ||||| ||||| || ||||| || ||||| Sbjct 1629 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTAATGGTCTTGCCGGTC 1688 Query 48704 AGAGTTTTCACAAAAATCTGCATCGT 48729 || || ||||| || || ||||| || Sbjct 1689 AGGGTCTTCACGAAGATTTGCATTGT 1714 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| ||| |||||| || |||||||| || || | || ||||||| |||||| Sbjct 825 TGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGC 884 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | || | |||||||||||| || | | ||||||||| || ||| Sbjct 885 TTGCCGGCGAAGATGAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTC 944 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | | | || || || | ||| ||||| || ||||| || ||||| Sbjct 945 TGCTTCACATTCTCGATCGTGTCCGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCGGTC 1004 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || || || || || |||||||| Sbjct 1005 AGCGTCTTGACGAAGATCTGCAT 1027 >seq55626 Length=4059 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| || |||| || ||||||| |||||| Sbjct 3971 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGC 3912 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| | | || | ||||||||||| || | | ||||||||| || || Sbjct 3911 TTGCCGGCAAAGATGAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTTT 3852 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||||| | | || || ||| | ||||| ||||| || ||||| || |||||| Sbjct 3851 TGCTTGACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 3792 Query 48704 AGAGTTTTCACAAAAATCTGCATCGT 48729 || || ||||| || |||||||| || Sbjct 3791 AGGGTCTTCACGAAGATCTGCATTGT 3766 >seq50178 Length=5618 Score = 87.8 bits (96), Expect = 2e-12 Identities = 121/169 (72%), Gaps = 3/169 (2%) Strand=Plus/Plus Query 48570 CGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCT 48629 ||||||| |||| |||||| || | || | |||||||||||| || | || |||| Sbjct 1358 CGTCCTCGAGCTCCTTACCCGCGAAGATGAGACGCTGCTGATCGGTAGGAATACCCTCCT 1417 Query 48630 TGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTA 48689 ||||| | || ||||| | | | ||||||||| | || || ||||| || | Sbjct 1418 TGTCCTGGACCTTTTGCTTCACGCTCTCGATGGTATCGCTGGATTCGACCTCGAGGGTGA 1477 Query 48690 TGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCA---TCGTGTCTTG 48735 |||| || | ||||| ||| |||||||| ||||||| |||||| ||| Sbjct 1478 TGGTCTTGCAGGTGATAGTCTTCACAAAGATCTGCATTGTCGTGTGTTG 1526 >seq43205 Length=799 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || |||| || ||||||| |||||||| || || | Sbjct 10 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAA 69 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||||||||||| || | | ||||||||| || |||||||||| Sbjct 70 GATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 129 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | | || || ||| | ||||| ||||| || ||||| || || || || || ||||| Sbjct 130 CTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTCAC 189 Query 48715 AAAAATCTGCAT 48726 || || ||||| Sbjct 190 GAAGATTTGCAT 201 >seq38151 Length=7651 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || |||| || ||||||| ||||||||||| || | Sbjct 274 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAA 215 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||||||||| ||| || | | ||||||||| || |||||||| | Sbjct 214 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 155 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | | || || |||| ||| ||||| || || || ||||| ||||| || || || Sbjct 154 CTCGATCGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTACCCGTGAGGGTCTTGAC 95 Query 48715 AAAAATCTGCAT 48726 || |||||||| Sbjct 94 GAAGATCTGCAT 83 >seq20806 Length=178 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || || | || ||||||| ||||||||||| | | Sbjct 172 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAA 113 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | |||||||||||| || | | |||||||||| || |||||||||| Sbjct 112 GATGAGACGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTT 53 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAG 48705 | | || || ||| | ||||| ||||| || ||||| || |||||||| Sbjct 52 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAG 2 >seq54486 Length=978 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| || |||| || ||||||| |||||| Sbjct 817 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 876 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | || | |||||||||||| ||| | | |||||||||| || ||| Sbjct 877 TTGCCGGCGAAGATGAGACGCTGCTGATCGGGCGGGATGCCTTCCTTGTCCTGGATCTTC 936 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGA 48683 ||||| | | | ||||| ||| | ||||| ||||| Sbjct 937 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGA 976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420904865561459