Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq55317 84.2 2e-11 >seq55317 Length=5276 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 94303 GAAGATGTTGGCCAGGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCC 94362 ||||| |||||| ||| |||||||| || || | || | ||| |||||| || || Sbjct 2613 GAAGACGTTGGCAAGGGAAGGGGGGATGGGGGCCTGGGGCAGCACGGAGAAGGCGAGGCC 2554 Query 94363 GTGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGAC 94416 ||||||||| | ||| |||||||||||||||||| | | ||||||||| || Sbjct 2553 GTGGGCCTGACGAGGCTGGTGGTACGGGTCCTGGCCCAGAACGACCACCTTAAC 2500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458560198510440