Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq58068 379 2e-100 seq54405 379 2e-100 seq54404 379 2e-100 >seq58068 Length=5899 Score = 379 bits (420), Expect = 2e-100 Identities = 929/1394 (67%), Gaps = 48/1394 (3%) Strand=Plus/Minus Query 94156 GGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTG 94215 || ||||| | | | |||||| ||||||| |||| || |||||||||||||||||| | Sbjct 4955 GGAGGTGGTAAGCGCAAGGGTGCTTTCGCCATCTACCTTGAGCCCTGGCACGCGGACATC 4896 Query 94216 CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GGGCCAGAGAC 94272 | ||| |||||||| |||||||||||||| || ||||| | ||| | || Sbjct 4895 TTTGACTTCCTCGACCTGAAGAAGAACCACGGCAAGGA---GGAGAACCGCGCCCGCGAT 4839 Query 94273 CTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCC 94332 |||||||||| || ||| | || ||||| || ||||| ||||| |||| | || | Sbjct 4838 CTCTTCTACGGCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGACTGGCGGCGAC 4779 Query 94333 TGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTT 94392 ||| || ||||| ||||| || ||||| |||| |||| || || | || Sbjct 4778 TGGTCGCTCTTTTGCCCCAACGAGGCCCCCGGCCTGTTCGACTCGTGGGGCAAGGAGTTC 4719 Query 94393 GAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC---CAGGAAGGTTATGGATGCT 94449 || || ||| | || ||||| | ||||| || | | ||| | || | Sbjct 4718 GAGGAGAAGTACGAGCGCTACGAGCAGGAGGGCCGCGCGCGCCGCGTGGTCAAGGC--CC 4661 Query 94450 AGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTG 94509 |||| ||||||| ||| | || ||| | ||||| || ||||||||||| || Sbjct 4660 AGGA-GCTGTGGTTCGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTG 4602 Query 94510 TTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCG 94569 | ||||||| | ||||| |||||||||||||||||||||||| ||| || ||| Sbjct 4601 TACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCG 4542 Query 94570 AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTG 94629 || |||||||| ||| | ||| |||| || || || |||||| | || ||||| |||||| Sbjct 4541 AACCTGTGCACGGAGGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTG 4482 Query 94630 GGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGAT 94689 | ||| || ||| ||| ||| | ||| | || || ||| || Sbjct 4481 GCCTCGCTCGCGCTGCCCAAGTTCAT------------CAC--CAACGGCGA-GTTTGAC 4437 Query 94690 CTGGAGGAGCTTGTGAACTTCG-CGGGAAGGATGGTCTT---GAACCTGAACAGGGTAAT 94745 | || |||| | || || || ||||| ||||| |||||| |||| ||| || Sbjct 4436 CACCAGAAGCT---GCACGACGTCGTGAAGG-TGGTCACCAAGAACCTCAACAAGGTGAT 4381 Query 94746 CGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCAT 94805 ||||| |||| ||||||||| || ||||| ||||| ||| || || ||||||| Sbjct 4380 CGACATCAACTACTACCCCGTGCCCGAGGCCCGCAACTCGAACATGCGCCACAGGCCCAT 4321 Query 94806 CGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTC 94865 ||||||||| || ||||| | || |||| | |||| |||| | || | || Sbjct 4320 CGGCATCGGAGTGCAGGGCCTGGCCGACGTCTTCATGATCCTGCGCCACCCGTGGGAGAG 4261 Query 94866 TGTCGACGCG-GCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGA 94924 | ||| || ||| | | | | ||| ||||| | ||| || |||| ||| || Sbjct 4260 CGACGAGGCCCGCGAGCTCAACCGCGC-CATCTTCGAGACCATCTACTACGCCGCCCTGG 4202 Query 94925 AACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCG 94983 || | | | || ||| ||| | ||| | || || | | | || ||| Sbjct 4201 TCGCCTCGAACGAGCTCGCGCAGGTCG-AGGGCAC-CTACCAGA--CCTACGAGGGCTCG 4146 Query 94984 CCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTAC 95043 ||| | |||||| | ||| |||||||||||| || ||| |||| || Sbjct 4145 CCCGCGTCCAAGGGCAAGCTCCAGCCCGACCTCTGGGGCGTCGTGCCGTCGGACAGGTGG 4086 Query 95044 GACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTG 95103 ||||||| | || ||||| | | | | |||||| || ||| |||| || ||| Sbjct 4085 GACTGGGCCACGCTCCGCGCCAACATCGCCCAGCACGGTCTGCGCAACTCGCTCCTCGTG 4026 Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 || ||||||||||||||||| || |||||||||| ||||||||||||| || || ||| Sbjct 4025 GCGCCCATGCCCACGGCCTCGACCTCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCC 3966 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | ||| ||||| | |||| | | || | |||||||| || ||| ||||| ||||| || Sbjct 3965 TACACGACCAACATCTACACCCGCCGCATCCTCGCCGGCGACTTCACCGTCGTCAACGAG 3906 Query 95224 CACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTG 95283 ||||| || || || || | | || | ||| | | |||||||| | || Sbjct 3905 CACCTTCTGCGCGAGCTCCAGCAGCGCGGCCTCTGGTCGCCCGCGCTCAAGAACAAGCT- 3847 Query 95284 CTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCT 95342 | | ||| ||||||||| |||||| |||| | | || || || ||||||||| ||| Sbjct 3846 CGTCTCGCACAACGGCTCGGTCCAGCGCATCGAGGAGATCCCCGACGACATCAAGAAGCT 3787 Query 95343 CTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGG 95402 |||||||||||||||||| ||||||||||||| || ||||| || |||| ||| Sbjct 3786 GTACAAGACCGTGTGGGAGCTCCCGCAGCGCGTCATCATCGACATGGCCGCCGATCGCTC 3727 Query 95403 GCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCCGAGCCCAGTCG--CGGA 95460 | ||| |||| |||||| |||| ||||||| ||| | Sbjct 3726 GGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCC--TCGTTTGCC 3669 Query 95461 AAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGTATTAT 95520 || | || || ||| ||||||| ||| | ||||| ||||||||||| ||||| || Sbjct 3668 AAGCTCACCTCGATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTAC 3609 Query 95521 TTGCGAACCAGGCC 95534 | || ||| |||| Sbjct 3608 CTTCGCACCCGGCC 3595 Score = 172 bits (190), Expect = 5e-38 Identities = 299/435 (69%), Gaps = 0/435 (0%) Strand=Plus/Minus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| |||||| || || ||| || |||||| ||| | | || |||| | | | Sbjct 5487 TACTTTGGCTTCAAGACCCTCGAGCGCTCCTACCTCTTCAGGGTCGACGGCAAGATCGTC 5428 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 |||||||| || || |||| |||||||| |||||||| | ||| || |||| || Sbjct 5427 GAGCGACCCCAGCACATGCTCATGCGCGTGGCCATCGGTCTGCACAAGGACAACATCCCC 5368 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 || | | | | | | || | | || | ||| || |||||||| Sbjct 5367 GCCGTGATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCTACCCCGACG 5308 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || |||||||| || |||||| || ||| |||| ||||| |||||| | || | ||| Sbjct 5307 CTCTTCAACGCCGGCACCCCGCGTCCGCAGCTGTCGTCGTGCTTCCTGCTCACCATGAAG 5248 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | ||||| ||| || || | ||||| ||||||| | || || |||||| || | Sbjct 5247 GAGGACTCGATCGAGGGCATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCG 5188 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || ||||| || | ||| | | || ||| || ||||||||||| Sbjct 5187 GCCGGCGGCATCGGCCTCGCCGCGCACCGCATCCGCGCCTCCAACTCGTACATCCGCGGC 5128 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 ||||| |||||||||||||| ||| |||| |||||||| |||| |||| || | || ||| Sbjct 5127 ACCAACGGCACCTCCAACGGTCTCATCCCCATGCTCCGCGTCTACAACGACACTGCCCGC 5068 Query 94144 TACGTGGACCAGGGT 94158 ||||| ||||| ||| Sbjct 5067 TACGTCGACCAAGGT 5053 >seq54405 Length=5848 Score = 379 bits (420), Expect = 2e-100 Identities = 929/1394 (67%), Gaps = 48/1394 (3%) Strand=Plus/Plus Query 94156 GGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTG 94215 || ||||| | | | |||||| ||||||| |||| || |||||||||||||||||| | Sbjct 4313 GGAGGTGGTAAGCGCAAGGGTGCTTTCGCCATCTACCTTGAGCCCTGGCACGCGGACATC 4372 Query 94216 CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GGGCCAGAGAC 94272 | ||| |||||||| |||||||||||||| || ||||| | ||| | || Sbjct 4373 TTTGACTTCCTCGACCTGAAGAAGAACCACGGCAAGGA---GGAGAACCGCGCCCGCGAT 4429 Query 94273 CTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCC 94332 |||||||||| || ||| | || ||||| || ||||| ||||| |||| | || | Sbjct 4430 CTCTTCTACGGCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGACTGGCGGCGAC 4489 Query 94333 TGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTT 94392 ||| || ||||| ||||| || ||||| |||| |||| || || | || Sbjct 4490 TGGTCGCTCTTTTGCCCCAACGAGGCCCCCGGCCTGTTCGACTCGTGGGGCAAGGAGTTC 4549 Query 94393 GAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC---CAGGAAGGTTATGGATGCT 94449 || || ||| | || ||||| | ||||| || | | ||| | || | Sbjct 4550 GAGGAGAAGTACGAGCGCTACGAGCAGGAGGGCCGCGCGCGCCGCGTGGTCAAGGC--CC 4607 Query 94450 AGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTG 94509 |||| ||||||| ||| | || ||| | ||||| || ||||||||||| || Sbjct 4608 AGGA-GCTGTGGTTCGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTG 4666 Query 94510 TTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCG 94569 | ||||||| | ||||| |||||||||||||||||||||||| ||| || ||| Sbjct 4667 TACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCG 4726 Query 94570 AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTG 94629 || |||||||| ||| | ||| |||| || || || |||||| | || ||||| |||||| Sbjct 4727 AACCTGTGCACGGAGGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTG 4786 Query 94630 GGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGAT 94689 | ||| || ||| ||| ||| | ||| | || || ||| || Sbjct 4787 GCCTCGCTCGCGCTGCCCAAGTTCAT------------CAC--CAACGGCGA-GTTTGAC 4831 Query 94690 CTGGAGGAGCTTGTGAACTTCG-CGGGAAGGATGGTCTT---GAACCTGAACAGGGTAAT 94745 | || |||| | || || || ||||| ||||| |||||| |||| ||| || Sbjct 4832 CACCAGAAGCT---GCACGACGTCGTGAAGG-TGGTCACCAAGAACCTCAACAAGGTGAT 4887 Query 94746 CGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCAT 94805 ||||| |||| ||||||||| || ||||| ||||| ||| || || ||||||| Sbjct 4888 CGACATCAACTACTACCCCGTGCCCGAGGCCCGCAACTCGAACATGCGCCACAGGCCCAT 4947 Query 94806 CGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTC 94865 ||||||||| || ||||| | || |||| | |||| |||| | || | || Sbjct 4948 CGGCATCGGAGTGCAGGGCCTGGCCGACGTCTTCATGATCCTGCGCCACCCGTGGGAGAG 5007 Query 94866 TGTCGACGCG-GCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGA 94924 | ||| || ||| | | | | ||| ||||| | ||| || |||| ||| || Sbjct 5008 CGACGAGGCCCGCGAGCTCAACCGCGC-CATCTTCGAGACCATCTACTACGCCGCCCTGG 5066 Query 94925 AACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCG 94983 || | | | || ||| ||| | ||| | || || | | | || ||| Sbjct 5067 TCGCCTCGAACGAGCTCGCGCAGGTCG-AGGGCAC-CTACCAGA--CCTACGAGGGCTCG 5122 Query 94984 CCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTAC 95043 ||| | |||||| | ||| |||||||||||| || ||| |||| || Sbjct 5123 CCCGCGTCCAAGGGCAAGCTCCAGCCCGACCTCTGGGGCGTCGTGCCGTCGGACAGGTGG 5182 Query 95044 GACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTG 95103 ||||||| | || ||||| | | | | |||||| || ||| |||| || ||| Sbjct 5183 GACTGGGCCACGCTCCGCGCCAACATCGCCCAGCACGGTCTGCGCAACTCGCTCCTCGTG 5242 Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 || ||||||||||||||||| || |||||||||| ||||||||||||| || || ||| Sbjct 5243 GCGCCCATGCCCACGGCCTCGACCTCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCC 5302 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | ||| ||||| | |||| | | || | |||||||| || ||| ||||| ||||| || Sbjct 5303 TACACGACCAACATCTACACCCGCCGCATCCTCGCCGGCGACTTCACCGTCGTCAACGAG 5362 Query 95224 CACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTG 95283 ||||| || || || || | | || | ||| | | |||||||| | || Sbjct 5363 CACCTTCTGCGCGAGCTCCAGCAGCGCGGCCTCTGGTCGCCCGCGCTCAAGAACAAGCT- 5421 Query 95284 CTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCT 95342 | | ||| ||||||||| |||||| |||| | | || || || ||||||||| ||| Sbjct 5422 CGTCTCGCACAACGGCTCGGTCCAGCGCATCGAGGAGATCCCCGACGACATCAAGAAGCT 5481 Query 95343 CTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGG 95402 |||||||||||||||||| ||||||||||||| || ||||| || |||| ||| Sbjct 5482 GTACAAGACCGTGTGGGAGCTCCCGCAGCGCGTCATCATCGACATGGCCGCCGATCGCTC 5541 Query 95403 GCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCCGAGCCCAGTCG--CGGA 95460 | ||| |||| |||||| |||| ||||||| ||| | Sbjct 5542 GGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCC--TCGTTTGCC 5599 Query 95461 AAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGTATTAT 95520 || | || || ||| ||||||| ||| | ||||| ||||||||||| ||||| || Sbjct 5600 AAGCTCACCTCGATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTAC 5659 Query 95521 TTGCGAACCAGGCC 95534 | || ||| |||| Sbjct 5660 CTTCGCACCCGGCC 5673 Score = 172 bits (190), Expect = 5e-38 Identities = 299/435 (69%), Gaps = 0/435 (0%) Strand=Plus/Plus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| |||||| || || ||| || |||||| ||| | | || |||| | | | Sbjct 3781 TACTTTGGCTTCAAGACCCTCGAGCGCTCCTACCTCTTCAGGGTCGACGGCAAGATCGTC 3840 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 |||||||| || || |||| |||||||| |||||||| | ||| || |||| || Sbjct 3841 GAGCGACCCCAGCACATGCTCATGCGCGTGGCCATCGGTCTGCACAAGGACAACATCCCC 3900 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 || | | | | | | || | | || | ||| || |||||||| Sbjct 3901 GCCGTGATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCTACCCCGACG 3960 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || |||||||| || |||||| || ||| |||| ||||| |||||| | || | ||| Sbjct 3961 CTCTTCAACGCCGGCACCCCGCGTCCGCAGCTGTCGTCGTGCTTCCTGCTCACCATGAAG 4020 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | ||||| ||| || || | ||||| ||||||| | || || |||||| || | Sbjct 4021 GAGGACTCGATCGAGGGCATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCG 4080 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || ||||| || | ||| | | || ||| || ||||||||||| Sbjct 4081 GCCGGCGGCATCGGCCTCGCCGCGCACCGCATCCGCGCCTCCAACTCGTACATCCGCGGC 4140 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 ||||| |||||||||||||| ||| |||| |||||||| |||| |||| || | || ||| Sbjct 4141 ACCAACGGCACCTCCAACGGTCTCATCCCCATGCTCCGCGTCTACAACGACACTGCCCGC 4200 Query 94144 TACGTGGACCAGGGT 94158 ||||| ||||| ||| Sbjct 4201 TACGTCGACCAAGGT 4215 >seq54404 Length=5758 Score = 379 bits (420), Expect = 2e-100 Identities = 929/1394 (67%), Gaps = 48/1394 (3%) Strand=Plus/Plus Query 94156 GGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTG 94215 || ||||| | | | |||||| ||||||| |||| || |||||||||||||||||| | Sbjct 4223 GGAGGTGGTAAGCGCAAGGGTGCTTTCGCCATCTACCTTGAGCCCTGGCACGCGGACATC 4282 Query 94216 CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GGGCCAGAGAC 94272 | ||| |||||||| |||||||||||||| || ||||| | ||| | || Sbjct 4283 TTTGACTTCCTCGACCTGAAGAAGAACCACGGCAAGGA---GGAGAACCGCGCCCGCGAT 4339 Query 94273 CTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCC 94332 |||||||||| || ||| | || ||||| || ||||| ||||| |||| | || | Sbjct 4340 CTCTTCTACGGCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGACTGGCGGCGAC 4399 Query 94333 TGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTT 94392 ||| || ||||| ||||| || ||||| |||| |||| || || | || Sbjct 4400 TGGTCGCTCTTTTGCCCCAACGAGGCCCCCGGCCTGTTCGACTCGTGGGGCAAGGAGTTC 4459 Query 94393 GAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC---CAGGAAGGTTATGGATGCT 94449 || || ||| | || ||||| | ||||| || | | ||| | || | Sbjct 4460 GAGGAGAAGTACGAGCGCTACGAGCAGGAGGGCCGCGCGCGCCGCGTGGTCAAGGC--CC 4517 Query 94450 AGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTG 94509 |||| ||||||| ||| | || ||| | ||||| || ||||||||||| || Sbjct 4518 AGGA-GCTGTGGTTCGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTG 4576 Query 94510 TTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCG 94569 | ||||||| | ||||| |||||||||||||||||||||||| ||| || ||| Sbjct 4577 TACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCG 4636 Query 94570 AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTG 94629 || |||||||| ||| | ||| |||| || || || |||||| | || ||||| |||||| Sbjct 4637 AACCTGTGCACGGAGGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTG 4696 Query 94630 GGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGAT 94689 | ||| || ||| ||| ||| | ||| | || || ||| || Sbjct 4697 GCCTCGCTCGCGCTGCCCAAGTTCAT------------CAC--CAACGGCGA-GTTTGAC 4741 Query 94690 CTGGAGGAGCTTGTGAACTTCG-CGGGAAGGATGGTCTT---GAACCTGAACAGGGTAAT 94745 | || |||| | || || || ||||| ||||| |||||| |||| ||| || Sbjct 4742 CACCAGAAGCT---GCACGACGTCGTGAAGG-TGGTCACCAAGAACCTCAACAAGGTGAT 4797 Query 94746 CGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCAT 94805 ||||| |||| ||||||||| || ||||| ||||| ||| || || ||||||| Sbjct 4798 CGACATCAACTACTACCCCGTGCCCGAGGCCCGCAACTCGAACATGCGCCACAGGCCCAT 4857 Query 94806 CGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTC 94865 ||||||||| || ||||| | || |||| | |||| |||| | || | || Sbjct 4858 CGGCATCGGAGTGCAGGGCCTGGCCGACGTCTTCATGATCCTGCGCCACCCGTGGGAGAG 4917 Query 94866 TGTCGACGCG-GCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGA 94924 | ||| || ||| | | | | ||| ||||| | ||| || |||| ||| || Sbjct 4918 CGACGAGGCCCGCGAGCTCAACCGCGC-CATCTTCGAGACCATCTACTACGCCGCCCTGG 4976 Query 94925 AACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCG 94983 || | | | || ||| ||| | ||| | || || | | | || ||| Sbjct 4977 TCGCCTCGAACGAGCTCGCGCAGGTCG-AGGGCAC-CTACCAGA--CCTACGAGGGCTCG 5032 Query 94984 CCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTAC 95043 ||| | |||||| | ||| |||||||||||| || ||| |||| || Sbjct 5033 CCCGCGTCCAAGGGCAAGCTCCAGCCCGACCTCTGGGGCGTCGTGCCGTCGGACAGGTGG 5092 Query 95044 GACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTG 95103 ||||||| | || ||||| | | | | |||||| || ||| |||| || ||| Sbjct 5093 GACTGGGCCACGCTCCGCGCCAACATCGCCCAGCACGGTCTGCGCAACTCGCTCCTCGTG 5152 Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 || ||||||||||||||||| || |||||||||| ||||||||||||| || || ||| Sbjct 5153 GCGCCCATGCCCACGGCCTCGACCTCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCC 5212 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | ||| ||||| | |||| | | || | |||||||| || ||| ||||| ||||| || Sbjct 5213 TACACGACCAACATCTACACCCGCCGCATCCTCGCCGGCGACTTCACCGTCGTCAACGAG 5272 Query 95224 CACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTG 95283 ||||| || || || || | | || | ||| | | |||||||| | || Sbjct 5273 CACCTTCTGCGCGAGCTCCAGCAGCGCGGCCTCTGGTCGCCCGCGCTCAAGAACAAGCT- 5331 Query 95284 CTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCT 95342 | | ||| ||||||||| |||||| |||| | | || || || ||||||||| ||| Sbjct 5332 CGTCTCGCACAACGGCTCGGTCCAGCGCATCGAGGAGATCCCCGACGACATCAAGAAGCT 5391 Query 95343 CTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGG 95402 |||||||||||||||||| ||||||||||||| || ||||| || |||| ||| Sbjct 5392 GTACAAGACCGTGTGGGAGCTCCCGCAGCGCGTCATCATCGACATGGCCGCCGATCGCTC 5451 Query 95403 GCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCCGAGCCCAGTCG--CGGA 95460 | ||| |||| |||||| |||| ||||||| ||| | Sbjct 5452 GGCCTACATCGACCAGAGCCAGTCGCTCAACGTCTACATGGGCGAGCCC--TCGTTTGCC 5509 Query 95461 AAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGTATTAT 95520 || | || || ||| ||||||| ||| | ||||| ||||||||||| ||||| || Sbjct 5510 AAGCTCACCTCGATGCACTTCTACGCCTGGCGCAAGGGCCTCAAGACCGGCATGTACTAC 5569 Query 95521 TTGCGAACCAGGCC 95534 | || ||| |||| Sbjct 5570 CTTCGCACCCGGCC 5583 Score = 172 bits (190), Expect = 5e-38 Identities = 299/435 (69%), Gaps = 0/435 (0%) Strand=Plus/Plus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| |||||| || || ||| || |||||| ||| | | || |||| | | | Sbjct 3691 TACTTTGGCTTCAAGACCCTCGAGCGCTCCTACCTCTTCAGGGTCGACGGCAAGATCGTC 3750 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 |||||||| || || |||| |||||||| |||||||| | ||| || |||| || Sbjct 3751 GAGCGACCCCAGCACATGCTCATGCGCGTGGCCATCGGTCTGCACAAGGACAACATCCCC 3810 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 || | | | | | | || | | || | ||| || |||||||| Sbjct 3811 GCCGTGATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCTACCCCGACG 3870 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || |||||||| || |||||| || ||| |||| ||||| |||||| | || | ||| Sbjct 3871 CTCTTCAACGCCGGCACCCCGCGTCCGCAGCTGTCGTCGTGCTTCCTGCTCACCATGAAG 3930 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | ||||| ||| || || | ||||| ||||||| | || || |||||| || | Sbjct 3931 GAGGACTCGATCGAGGGCATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCG 3990 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || ||||| || | ||| | | || ||| || ||||||||||| Sbjct 3991 GCCGGCGGCATCGGCCTCGCCGCGCACCGCATCCGCGCCTCCAACTCGTACATCCGCGGC 4050 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 ||||| |||||||||||||| ||| |||| |||||||| |||| |||| || | || ||| Sbjct 4051 ACCAACGGCACCTCCAACGGTCTCATCCCCATGCTCCGCGTCTACAACGACACTGCCCGC 4110 Query 94144 TACGTGGACCAGGGT 94158 ||||| ||||| ||| Sbjct 4111 TACGTCGACCAAGGT 4125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494306030845640