Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq58068 230 3e-55 seq54405 230 3e-55 seq54404 230 3e-55 seq50985 95.1 1e-14 seq50789 95.1 1e-14 seq50610 95.1 1e-14 seq50609 95.1 1e-14 >seq58068 Length=5899 Score = 230 bits (254), Expect = 3e-55 Identities = 878/1359 (65%), Gaps = 32/1359 (2%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 3604 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 3663 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||||| | | || ||||| ||| ||| | ||| || |||||| || Sbjct 3664 AGCTTGGCAAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 3723 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || ||||| || || | | | | || |||||||| || || Sbjct 3724 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTG 3783 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 || || ||||| || || || ||||| ||| |||| |||| ||||| | | Sbjct 3784 TACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTGCGAG 3843 Query 115798 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGG 115857 || | | ||| | | |||||||| || || || ||| || || ||| Sbjct 3844 ACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGAAGG 3903 Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTG 115917 |||| ||||| || || || || |||||| |||| | ||||||||||||||| Sbjct 3904 TGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTG 3963 Query 115918 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 115977 || |||||||||||||| ||||| |||| ||| || | || ||||| ||||||||||| Sbjct 3964 TAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGC 4023 Query 115978 GCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAG 116037 |||| ||| || |||||| ||||| | ||| | ||| | | ||||| Sbjct 4024 GCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAG 4083 Query 116038 TCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097 || | || | | | | | |||| | || |||||| | || | |||||| Sbjct 4084 TCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCG 4143 Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 116154 ||||| ||||| | |||| || | |||||| |||| ||| | ||| ||| || Sbjct 4144 GGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GCG 4200 Query 116155 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA-TTCATTGCCTTGGCCTCGTC 116213 | ||||| |||| || || ||||| || ||| | || || | | ||||||||| Sbjct 4201 ACCAGGGCGGCGTAGTAGATGGTCTCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTCGTC 4259 Query 116214 GGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 116273 | || ||| | | || | || || || || || || || || || |||| ||| Sbjct 4260 GCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCC 4319 Query 116274 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCT 116330 || || | || | ||| || || || || || ||| |||||| || | || | Sbjct 4320 GATGGGCCTGTGGCGCATGTTCGAGTTGCGGGC---CTCGGGCACGGGGTAGTAGTTGAT 4376 Query 116331 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 116390 ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 4377 GTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTG 4436 Query 116391 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 116450 ||||| || || | | || || |||| || || |||| || ||||| || || Sbjct 4437 GTCAAACTCGCC-GT-TGGTGAT-GA---ACTTGGGCAGCGCGAGCGAGGCCAGGTTGCA 4490 Query 116451 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 116510 ||| | ||| || ||||||| | | ||||| |||| || || || Sbjct 4491 CACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTG 4550 Query 116511 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATA 116570 |||||||| | || || || || ||||| ||| || || |||||||| ||||| || Sbjct 4551 GATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTA 4610 Query 116571 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--TGGC 116628 ||||| || ||||| | || |||| ||| || || ||| | || ||| || | Sbjct 4611 GGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGAC 4670 Query 116629 ACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTC-TTC 116687 | |||| || || ||||||| |||||| ||| |||| ||||| || Sbjct 4671 CACGCGGCGC--GCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTG 4728 Query 116688 ACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACC 116747 ||||| | || | || || || |||| | || || ||||| ||||| | || || Sbjct 4729 CCCCAC-GAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCC 4787 Query 116748 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCGAC 116806 ||| || ||||||||||| ||||| || ||||| || |||| |||||||||| || Sbjct 4788 AGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAG-GCCGTAGAAGAGATCGCG-- 4844 Query 116807 AGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 116864 ||| | |||| || | || || || || || | ||||| | ||| ||||| Sbjct 4845 GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGC 4904 Query 116865 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 |||||| || || ||||| | |||| | |||||||| Sbjct 4905 GTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCCTTGCG 4943 Score = 122 bits (134), Expect = 1e-22 Identities = 216/315 (69%), Gaps = 0/315 (0%) Strand=Plus/Plus Query 117031 CCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCA 117090 || || || || ||| |||| ||||| | ||||||| | |||| || ||||||| || Sbjct 5174 CCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 5233 Query 117091 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 117150 ||||||||||| |||| | | || |||||||| ||||| || || | || || Sbjct 5234 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTG 5293 Query 117151 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAG 117210 || ||||||||||| || || || |||||| |||| | || |||| |||||| Sbjct 5294 CCGGCGTTGAAGAGCGTCGGGGTAGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 5353 Query 117211 GTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATG 117270 ||||| | || | ||| |||| ||| ||| | |||||| | || ||||| | |||| Sbjct 5354 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATG 5413 Query 117271 TATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTC 117330 | |||||| || | | | || |||| ||| |||||| ||| | |||| Sbjct 5414 TGCTGGGGTCGCTCGACGATCTTGCCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTC 5473 Query 117331 TTGAGACCAAAATAG 117345 |||| ||||| ||| Sbjct 5474 TTGAAGCCAAAGTAG 5488 >seq54405 Length=5848 Score = 230 bits (254), Expect = 3e-55 Identities = 878/1359 (65%), Gaps = 32/1359 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 5664 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 5605 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||||| | | || ||||| ||| ||| | ||| || |||||| || Sbjct 5604 AGCTTGGCAAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 5545 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || ||||| || || | | | | || |||||||| || || Sbjct 5544 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTG 5485 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 || || ||||| || || || ||||| ||| |||| |||| ||||| | | Sbjct 5484 TACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTGCGAG 5425 Query 115798 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGG 115857 || | | ||| | | |||||||| || || || ||| || || ||| Sbjct 5424 ACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGAAGG 5365 Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTG 115917 |||| ||||| || || || || |||||| |||| | ||||||||||||||| Sbjct 5364 TGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTG 5305 Query 115918 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 115977 || |||||||||||||| ||||| |||| ||| || | || ||||| ||||||||||| Sbjct 5304 TAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGC 5245 Query 115978 GCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAG 116037 |||| ||| || |||||| ||||| | ||| | ||| | | ||||| Sbjct 5244 GCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAG 5185 Query 116038 TCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097 || | || | | | | | |||| | || |||||| | || | |||||| Sbjct 5184 TCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCG 5125 Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 116154 ||||| ||||| | |||| || | |||||| |||| ||| | ||| ||| || Sbjct 5124 GGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GCG 5068 Query 116155 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA-TTCATTGCCTTGGCCTCGTC 116213 | ||||| |||| || || ||||| || ||| | || || | | ||||||||| Sbjct 5067 ACCAGGGCGGCGTAGTAGATGGTCTCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTCGTC 5009 Query 116214 GGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 116273 | || ||| | | || | || || || || || || || || || |||| ||| Sbjct 5008 GCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCC 4949 Query 116274 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCT 116330 || || | || | ||| || || || || || ||| |||||| || | || | Sbjct 4948 GATGGGCCTGTGGCGCATGTTCGAGTTGCGGGC---CTCGGGCACGGGGTAGTAGTTGAT 4892 Query 116331 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 116390 ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 4891 GTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTG 4832 Query 116391 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 116450 ||||| || || | | || || |||| || || |||| || ||||| || || Sbjct 4831 GTCAAACTCGCC-GT-TGGTGAT-GA---ACTTGGGCAGCGCGAGCGAGGCCAGGTTGCA 4778 Query 116451 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 116510 ||| | ||| || ||||||| | | ||||| |||| || || || Sbjct 4777 CACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTG 4718 Query 116511 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATA 116570 |||||||| | || || || || ||||| ||| || || |||||||| ||||| || Sbjct 4717 GATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTA 4658 Query 116571 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--TGGC 116628 ||||| || ||||| | || |||| ||| || || ||| | || ||| || | Sbjct 4657 GGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGAC 4598 Query 116629 ACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTC-TTC 116687 | |||| || || ||||||| |||||| ||| |||| ||||| || Sbjct 4597 CACGCGGCGC--GCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTG 4540 Query 116688 ACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACC 116747 ||||| | || | || || || |||| | || || ||||| ||||| | || || Sbjct 4539 CCCCAC-GAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCC 4481 Query 116748 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCGAC 116806 ||| || ||||||||||| ||||| || ||||| || |||| |||||||||| || Sbjct 4480 AGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAG-GCCGTAGAAGAGATCGCG-- 4424 Query 116807 AGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 116864 ||| | |||| || | || || || || || | ||||| | ||| ||||| Sbjct 4423 GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGC 4364 Query 116865 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 |||||| || || ||||| | |||| | |||||||| Sbjct 4363 GTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCCTTGCG 4325 Score = 122 bits (134), Expect = 1e-22 Identities = 216/315 (69%), Gaps = 0/315 (0%) Strand=Plus/Minus Query 117031 CCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCA 117090 || || || || ||| |||| ||||| | ||||||| | |||| || ||||||| || Sbjct 4094 CCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 4035 Query 117091 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 117150 ||||||||||| |||| | | || |||||||| ||||| || || | || || Sbjct 4034 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTG 3975 Query 117151 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAG 117210 || ||||||||||| || || || |||||| |||| | || |||| |||||| Sbjct 3974 CCGGCGTTGAAGAGCGTCGGGGTAGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 3915 Query 117211 GTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATG 117270 ||||| | || | ||| |||| ||| ||| | |||||| | || ||||| | |||| Sbjct 3914 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATG 3855 Query 117271 TATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTC 117330 | |||||| || | | | || |||| ||| |||||| ||| | |||| Sbjct 3854 TGCTGGGGTCGCTCGACGATCTTGCCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTC 3795 Query 117331 TTGAGACCAAAATAG 117345 |||| ||||| ||| Sbjct 3794 TTGAAGCCAAAGTAG 3780 >seq54404 Length=5758 Score = 230 bits (254), Expect = 3e-55 Identities = 878/1359 (65%), Gaps = 32/1359 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 5574 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 5515 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||||| | | || ||||| ||| ||| | ||| || |||||| || Sbjct 5514 AGCTTGGCAAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 5455 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || ||||| || || | | | | || |||||||| || || Sbjct 5454 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTG 5395 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 || || ||||| || || || ||||| ||| |||| |||| ||||| | | Sbjct 5394 TACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTGCGAG 5335 Query 115798 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGG 115857 || | | ||| | | |||||||| || || || ||| || || ||| Sbjct 5334 ACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGAAGG 5275 Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTG 115917 |||| ||||| || || || || |||||| |||| | ||||||||||||||| Sbjct 5274 TGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTG 5215 Query 115918 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 115977 || |||||||||||||| ||||| |||| ||| || | || ||||| ||||||||||| Sbjct 5214 TAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGC 5155 Query 115978 GCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAG 116037 |||| ||| || |||||| ||||| | ||| | ||| | | ||||| Sbjct 5154 GCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAG 5095 Query 116038 TCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097 || | || | | | | | |||| | || |||||| | || | |||||| Sbjct 5094 TCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCG 5035 Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 116154 ||||| ||||| | |||| || | |||||| |||| ||| | ||| ||| || Sbjct 5034 GGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GCG 4978 Query 116155 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA-TTCATTGCCTTGGCCTCGTC 116213 | ||||| |||| || || ||||| || ||| | || || | | ||||||||| Sbjct 4977 ACCAGGGCGGCGTAGTAGATGGTCTCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTCGTC 4919 Query 116214 GGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 116273 | || ||| | | || | || || || || || || || || || |||| ||| Sbjct 4918 GCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCC 4859 Query 116274 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCT 116330 || || | || | ||| || || || || || ||| |||||| || | || | Sbjct 4858 GATGGGCCTGTGGCGCATGTTCGAGTTGCGGGC---CTCGGGCACGGGGTAGTAGTTGAT 4802 Query 116331 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 116390 ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 4801 GTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTG 4742 Query 116391 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 116450 ||||| || || | | || || |||| || || |||| || ||||| || || Sbjct 4741 GTCAAACTCGCC-GT-TGGTGAT-GA---ACTTGGGCAGCGCGAGCGAGGCCAGGTTGCA 4688 Query 116451 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 116510 ||| | ||| || ||||||| | | ||||| |||| || || || Sbjct 4687 CACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTG 4628 Query 116511 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATA 116570 |||||||| | || || || || ||||| ||| || || |||||||| ||||| || Sbjct 4627 GATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTA 4568 Query 116571 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--TGGC 116628 ||||| || ||||| | || |||| ||| || || ||| | || ||| || | Sbjct 4567 GGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGAC 4508 Query 116629 ACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTC-TTC 116687 | |||| || || ||||||| |||||| ||| |||| ||||| || Sbjct 4507 CACGCGGCGC--GCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTG 4450 Query 116688 ACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACC 116747 ||||| | || | || || || |||| | || || ||||| ||||| | || || Sbjct 4449 CCCCAC-GAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCC 4391 Query 116748 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCGAC 116806 ||| || ||||||||||| ||||| || ||||| || |||| |||||||||| || Sbjct 4390 AGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAG-GCCGTAGAAGAGATCGCG-- 4334 Query 116807 AGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 116864 ||| | |||| || | || || || || || | ||||| | ||| ||||| Sbjct 4333 GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGC 4274 Query 116865 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 |||||| || || ||||| | |||| | |||||||| Sbjct 4273 GTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCCTTGCG 4235 Score = 122 bits (134), Expect = 1e-22 Identities = 216/315 (69%), Gaps = 0/315 (0%) Strand=Plus/Minus Query 117031 CCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCA 117090 || || || || ||| |||| ||||| | ||||||| | |||| || ||||||| || Sbjct 4004 CCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 3945 Query 117091 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 117150 ||||||||||| |||| | | || |||||||| ||||| || || | || || Sbjct 3944 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTG 3885 Query 117151 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAG 117210 || ||||||||||| || || || |||||| |||| | || |||| |||||| Sbjct 3884 CCGGCGTTGAAGAGCGTCGGGGTAGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 3825 Query 117211 GTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATG 117270 ||||| | || | ||| |||| ||| ||| | |||||| | || ||||| | |||| Sbjct 3824 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATG 3765 Query 117271 TATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTC 117330 | |||||| || | | | || |||| ||| |||||| ||| | |||| Sbjct 3764 TGCTGGGGTCGCTCGACGATCTTGCCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTC 3705 Query 117331 TTGAGACCAAAATAG 117345 |||| ||||| ||| Sbjct 3704 TTGAAGCCAAAGTAG 3690 >seq50985 Length=2480 Score = 95.1 bits (104), Expect = 1e-14 Identities = 241/360 (67%), Gaps = 9/360 (3%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| ||||| || ||| ||| | || || |||| || || |||||||| || Sbjct 785 GTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCC 726 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | || || ||| ||||||||||| ||||| || Sbjct 725 GCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGC 666 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGG-AGCGGGA--CTTTGTATCAAACCACTTCAT 127707 ||||| | | ||||||||||| |||| || | || | | | ||||||||| Sbjct 665 GGCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTTGTTGATCCACTTCAT 606 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 127767 |||||| | ||||| |||| || | || ||||||| ||| || ||||| | Sbjct 605 CGCCCAGTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTC 546 Query 127768 CTTTTCTGATGG-ATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGA 127826 ||| || || || || |||| ||| | || ||||| || || | ||| ||||| Sbjct 545 CTTCTC-GACGGCGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTACATCTCGGAGTGGA 487 Query 127827 CCATTTCATTATGGC--ACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 127884 ||| ||||| ||| | ||||||| ||||||| ||| | ||||||||| Sbjct 486 --TGTTCTCGATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGTACCTC 429 >seq50789 Length=2477 Score = 95.1 bits (104), Expect = 1e-14 Identities = 241/360 (67%), Gaps = 9/360 (3%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| ||||| || ||| ||| | || || |||| || || |||||||| || Sbjct 1693 GTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCC 1752 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | || || ||| ||||||||||| ||||| || Sbjct 1753 GCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGC 1812 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGG-AGCGGGA--CTTTGTATCAAACCACTTCAT 127707 ||||| | | ||||||||||| |||| || | || | | | ||||||||| Sbjct 1813 GGCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTTGTTGATCCACTTCAT 1872 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 127767 |||||| | ||||| |||| || | || ||||||| ||| || ||||| | Sbjct 1873 CGCCCAGTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTC 1932 Query 127768 CTTTTCTGATGG-ATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGA 127826 ||| || || || || |||| ||| | || ||||| || || | ||| ||||| Sbjct 1933 CTTCTC-GACGGCGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTACATCTCGGAGTGGA 1991 Query 127827 CCATTTCATTATGGC--ACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 127884 ||| ||||| ||| | ||||||| ||||||| ||| | ||||||||| Sbjct 1992 --TGTTCTCGATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGTACCTC 2049 >seq50610 Length=4059 Score = 95.1 bits (104), Expect = 1e-14 Identities = 241/360 (67%), Gaps = 9/360 (3%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| ||||| || ||| ||| | || || |||| || || |||||||| || Sbjct 3694 GTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCC 3635 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | || || ||| ||||||||||| ||||| || Sbjct 3634 GCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGC 3575 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGG-AGCGGGA--CTTTGTATCAAACCACTTCAT 127707 ||||| | | ||||||||||| |||| || | || | | | ||||||||| Sbjct 3574 GGCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTTGTTGATCCACTTCAT 3515 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 127767 |||||| | ||||| |||| || | || ||||||| ||| || ||||| | Sbjct 3514 CGCCCAGTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTC 3455 Query 127768 CTTTTCTGATGG-ATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGA 127826 ||| || || || || |||| ||| | || ||||| || || | ||| ||||| Sbjct 3454 CTTCTC-GACGGCGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTACATCTCGGAGTGGA 3396 Query 127827 CCATTTCATTATGGC--ACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 127884 ||| ||||| ||| | ||||||| ||||||| ||| | ||||||||| Sbjct 3395 --TGTTCTCGATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGTACCTC 3338 >seq50609 Length=4102 Score = 95.1 bits (104), Expect = 1e-14 Identities = 241/360 (67%), Gaps = 9/360 (3%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| ||||| || ||| ||| | || || |||| || || |||||||| || Sbjct 3737 GTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCC 3678 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | || || ||| ||||||||||| ||||| || Sbjct 3677 GCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGC 3618 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGG-AGCGGGA--CTTTGTATCAAACCACTTCAT 127707 ||||| | | ||||||||||| |||| || | || | | | ||||||||| Sbjct 3617 GGCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTTGTTGATCCACTTCAT 3558 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 127767 |||||| | ||||| |||| || | || ||||||| ||| || ||||| | Sbjct 3557 CGCCCAGTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTC 3498 Query 127768 CTTTTCTGATGG-ATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGA 127826 ||| || || || || |||| ||| | || ||||| || || | ||| ||||| Sbjct 3497 CTTCTC-GACGGCGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTACATCTCGGAGTGGA 3439 Query 127827 CCATTTCATTATGGC--ACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 127884 ||| ||||| ||| | ||||||| ||||||| ||| | ||||||||| Sbjct 3438 --TGTTCTCGATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGTACCTC 3381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612989867722440