Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq58068 145 9e-30 seq54405 145 9e-30 seq54404 145 9e-30 seq50985 107 2e-18 seq50789 107 2e-18 seq50610 107 2e-18 seq50609 107 2e-18 >seq58068 Length=5899 Score = 145 bits (160), Expect = 9e-30 Identities = 649/1013 (64%), Gaps = 30/1013 (3%) Strand=Plus/Minus Query 111987 CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 112046 |||||||| || |||| |||| |||||||| ||||||||||| ||| | || ||||| Sbjct 4943 CGCAAGGGTGCTTTCGCCATCTACCTTGAGCCCTGGCACGCGGACATCTTTGACTTCCTC 4884 Query 112047 GAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 112106 || || ||||| || | |||||| || |||||||||||||| || || Sbjct 4883 GACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTG 4824 Query 112107 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 112166 |||||||| || || ||||||||| | || ||| | ||| | ||||| |||||||| Sbjct 4823 TGGATTCCCGACCTGTTCATGAAGCGCGTGGAGACTGGCGGCGACTGGTCGCTCTTTTGC 4764 Query 112167 CCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACA 112226 || || |||| ||||| || | ||| | ||| ||||||| || | ||| Sbjct 4763 CCCAACGAGGCCCCCGGCCTGTTCGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAG 4704 Query 112227 AAGTACGAGGAAGAAAGTCGGGCG-ACTGCGACGGTGCCAGCTGCC---GATGTGTGGAA 112282 |||||| | || | || ||| | ||| ||| | || ||| || ||||| Sbjct 4703 CGCTACGAGCAGGAGGGCCGCGCGCGCCGCG-TGGT-CAAG--GCCCAGGAGCTGTGGTT 4648 Query 112283 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTG 112342 || || ||| |||| || | |||||| || || || || ||||| ||||| |||||||| Sbjct 4647 CGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTG 4588 Query 112343 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGA 112402 ||| ||| || || || | | || ||| || || ||||| || || || Sbjct 4587 CAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGA 4528 Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462 || | | | || || ||| ||| ||||| ||||| || || |||| || Sbjct 4527 GGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTGGCCTCGCTCGCGCT 4468 Query 112463 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 112522 ||||||| | ||| | | | ||||| | | || || ||||| || Sbjct 4467 GCCCAAGTTCAT--CACCAACGGCGA----GTTTGACCACCAGAAGCTGCACGACGTCGT 4414 Query 112523 GAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGA 112579 ||| ||||| || ||||| |||| || || || | || | |||||||| || Sbjct 4413 GAAGGTGGTCACCAAGAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA 4354 Query 112580 GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGC 112639 | || || || || || ||| | ||| | || || || |||| || || || || || Sbjct 4353 G---GCCCGCAACTCGAACATGCGCCACAGGCCCATCGGCATCGGAGTGCAGGGCCTGGC 4297 Query 112640 GGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA-TG 112698 || || ||||| | |||||| | | || |||||| || || |||| | Sbjct 4296 CGACGTCTTCATGATCCTGCGCCACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCG 4237 Query 112699 CGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAG 112755 ||| || || ||||| || || ||||||| || | || ||| ||| | || Sbjct 4236 CGC-CATCTTCGAGACCATCTACTACGCCGCCCTGGTCGC---CTCGAACGAGCTCGCGC 4181 Query 112756 AGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAA 112814 |||| || || | || | |||| ||||| || || || || |||||| ||| || Sbjct 4180 AGGTCGAGGGCACCTACCAGACCTACGAGGGCTCGCCCGCGTC-CAAGGGCAAGCTCCAG 4122 Query 112815 TTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGC 112874 || | |||| | | | | | | ||||||| | | ||| | | Sbjct 4121 CCCGACCTCTGGGGCGTCGTGCCGTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAAC 4062 Query 112875 ATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACC 112934 ||| || | ||||| || ||| || | |||| || ||||| || ||||| ||| Sbjct 4061 ATCGCCCAGCACGGTCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACC 4002 Query 112935 GCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 | || ||| |||| || || || |||||||| ||||||||||| |||||||| Sbjct 4001 TCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTA 3949 Score = 82.4 bits (90), Expect = 9e-11 Identities = 167/248 (67%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || || |||||| | || ||| | || | || Sbjct 5421 CCCCAGCACATGCTCATGCGCGTGGCCATCGGTCTGCACAAGGACAACATCCCCGCCGTG 5362 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| |||||| |||| | | |||| |||||| || || || |||||| Sbjct 5361 ATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCTACCCCGACGCTCTTC 5302 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || || || | || || |||| || ||||| | | | |||||||| Sbjct 5301 AACGCCGGCACCCCGCGTCCGCAGCTGTCGTCGTGCTTCCTGCTCACCATGAAGGAGGAC 5242 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || ||| | ||||| |||| ||| |||| | || |||| ||||| |||| ||| || Sbjct 5241 TCGATCGAGGGCATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGGC 5182 Query 111852 GGTATCGG 111859 || ||||| Sbjct 5181 GGCATCGG 5174 >seq54405 Length=5848 Score = 145 bits (160), Expect = 9e-30 Identities = 649/1013 (64%), Gaps = 30/1013 (3%) Strand=Plus/Plus Query 111987 CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 112046 |||||||| || |||| |||| |||||||| ||||||||||| ||| | || ||||| Sbjct 4325 CGCAAGGGTGCTTTCGCCATCTACCTTGAGCCCTGGCACGCGGACATCTTTGACTTCCTC 4384 Query 112047 GAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 112106 || || ||||| || | |||||| || |||||||||||||| || || Sbjct 4385 GACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTG 4444 Query 112107 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 112166 |||||||| || || ||||||||| | || ||| | ||| | ||||| |||||||| Sbjct 4445 TGGATTCCCGACCTGTTCATGAAGCGCGTGGAGACTGGCGGCGACTGGTCGCTCTTTTGC 4504 Query 112167 CCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACA 112226 || || |||| ||||| || | ||| | ||| ||||||| || | ||| Sbjct 4505 CCCAACGAGGCCCCCGGCCTGTTCGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAG 4564 Query 112227 AAGTACGAGGAAGAAAGTCGGGCG-ACTGCGACGGTGCCAGCTGCC---GATGTGTGGAA 112282 |||||| | || | || ||| | ||| ||| | || ||| || ||||| Sbjct 4565 CGCTACGAGCAGGAGGGCCGCGCGCGCCGCG-TGGT-CAAG--GCCCAGGAGCTGTGGTT 4620 Query 112283 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTG 112342 || || ||| |||| || | |||||| || || || || ||||| ||||| |||||||| Sbjct 4621 CGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTG 4680 Query 112343 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGA 112402 ||| ||| || || || | | || ||| || || ||||| || || || Sbjct 4681 CAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGA 4740 Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462 || | | | || || ||| ||| ||||| ||||| || || |||| || Sbjct 4741 GGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTGGCCTCGCTCGCGCT 4800 Query 112463 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 112522 ||||||| | ||| | | | ||||| | | || || ||||| || Sbjct 4801 GCCCAAGTTCAT--CACCAACGGCGA----GTTTGACCACCAGAAGCTGCACGACGTCGT 4854 Query 112523 GAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGA 112579 ||| ||||| || ||||| |||| || || || | || | |||||||| || Sbjct 4855 GAAGGTGGTCACCAAGAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA 4914 Query 112580 GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGC 112639 | || || || || || ||| | ||| | || || || |||| || || || || || Sbjct 4915 G---GCCCGCAACTCGAACATGCGCCACAGGCCCATCGGCATCGGAGTGCAGGGCCTGGC 4971 Query 112640 GGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA-TG 112698 || || ||||| | |||||| | | || |||||| || || |||| | Sbjct 4972 CGACGTCTTCATGATCCTGCGCCACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCG 5031 Query 112699 CGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAG 112755 ||| || || ||||| || || ||||||| || | || ||| ||| | || Sbjct 5032 CGC-CATCTTCGAGACCATCTACTACGCCGCCCTGGTCGC---CTCGAACGAGCTCGCGC 5087 Query 112756 AGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAA 112814 |||| || || | || | |||| ||||| || || || || |||||| ||| || Sbjct 5088 AGGTCGAGGGCACCTACCAGACCTACGAGGGCTCGCCCGCGTC-CAAGGGCAAGCTCCAG 5146 Query 112815 TTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGC 112874 || | |||| | | | | | | ||||||| | | ||| | | Sbjct 5147 CCCGACCTCTGGGGCGTCGTGCCGTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAAC 5206 Query 112875 ATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACC 112934 ||| || | ||||| || ||| || | |||| || ||||| || ||||| ||| Sbjct 5207 ATCGCCCAGCACGGTCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACC 5266 Query 112935 GCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 | || ||| |||| || || || |||||||| ||||||||||| |||||||| Sbjct 5267 TCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTA 5319 Score = 82.4 bits (90), Expect = 9e-11 Identities = 167/248 (67%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || || |||||| | || ||| | || | || Sbjct 3847 CCCCAGCACATGCTCATGCGCGTGGCCATCGGTCTGCACAAGGACAACATCCCCGCCGTG 3906 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| |||||| |||| | | |||| |||||| || || || |||||| Sbjct 3907 ATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCTACCCCGACGCTCTTC 3966 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || || || | || || |||| || ||||| | | | |||||||| Sbjct 3967 AACGCCGGCACCCCGCGTCCGCAGCTGTCGTCGTGCTTCCTGCTCACCATGAAGGAGGAC 4026 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || ||| | ||||| |||| ||| |||| | || |||| ||||| |||| ||| || Sbjct 4027 TCGATCGAGGGCATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGGC 4086 Query 111852 GGTATCGG 111859 || ||||| Sbjct 4087 GGCATCGG 4094 >seq54404 Length=5758 Score = 145 bits (160), Expect = 9e-30 Identities = 649/1013 (64%), Gaps = 30/1013 (3%) Strand=Plus/Plus Query 111987 CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTT 112046 |||||||| || |||| |||| |||||||| ||||||||||| ||| | || ||||| Sbjct 4235 CGCAAGGGTGCTTTCGCCATCTACCTTGAGCCCTGGCACGCGGACATCTTTGACTTCCTC 4294 Query 112047 GAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 112106 || || ||||| || | |||||| || |||||||||||||| || || Sbjct 4295 GACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTCTTCTACGGCCTG 4354 Query 112107 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 112166 |||||||| || || ||||||||| | || ||| | ||| | ||||| |||||||| Sbjct 4355 TGGATTCCCGACCTGTTCATGAAGCGCGTGGAGACTGGCGGCGACTGGTCGCTCTTTTGC 4414 Query 112167 CCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACA 112226 || || |||| ||||| || | ||| | ||| ||||||| || | ||| Sbjct 4415 CCCAACGAGGCCCCCGGCCTGTTCGACTCGTGGGGCAAGGAGTTCGAGGAGAAGTACGAG 4474 Query 112227 AAGTACGAGGAAGAAAGTCGGGCG-ACTGCGACGGTGCCAGCTGCC---GATGTGTGGAA 112282 |||||| | || | || ||| | ||| ||| | || ||| || ||||| Sbjct 4475 CGCTACGAGCAGGAGGGCCGCGCGCGCCGCG-TGGT-CAAG--GCCCAGGAGCTGTGGTT 4530 Query 112283 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTG 112342 || || ||| |||| || | |||||| || || || || ||||| ||||| |||||||| Sbjct 4531 CGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGTACAAGGACGCCTG 4590 Query 112343 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGA 112402 ||| ||| || || || | | || ||| || || ||||| || || || Sbjct 4591 CAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCGTCGAACCTGTGCACGGA 4650 Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462 || | | | || || ||| ||| ||||| ||||| || || |||| || Sbjct 4651 GGTCGTCCAGTACACGTCGCCCGACGAGGTGGCCGTGTGCAACCTGGCCTCGCTCGCGCT 4710 Query 112463 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 112522 ||||||| | ||| | | | ||||| | | || || ||||| || Sbjct 4711 GCCCAAGTTCAT--CACCAACGGCGA----GTTTGACCACCAGAAGCTGCACGACGTCGT 4764 Query 112523 GAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGA 112579 ||| ||||| || ||||| |||| || || || | || | |||||||| || Sbjct 4765 GAAGGTGGTCACCAAGAACCTCAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA 4824 Query 112580 GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGC 112639 | || || || || || ||| | ||| | || || || |||| || || || || || Sbjct 4825 G---GCCCGCAACTCGAACATGCGCCACAGGCCCATCGGCATCGGAGTGCAGGGCCTGGC 4881 Query 112640 GGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA-TG 112698 || || ||||| | |||||| | | || |||||| || || |||| | Sbjct 4882 CGACGTCTTCATGATCCTGCGCCACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCG 4941 Query 112699 CGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAG 112755 ||| || || ||||| || || ||||||| || | || ||| ||| | || Sbjct 4942 CGC-CATCTTCGAGACCATCTACTACGCCGCCCTGGTCGC---CTCGAACGAGCTCGCGC 4997 Query 112756 AGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAA 112814 |||| || || | || | |||| ||||| || || || || |||||| ||| || Sbjct 4998 AGGTCGAGGGCACCTACCAGACCTACGAGGGCTCGCCCGCGTC-CAAGGGCAAGCTCCAG 5056 Query 112815 TTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGC 112874 || | |||| | | | | | | ||||||| | | ||| | | Sbjct 5057 CCCGACCTCTGGGGCGTCGTGCCGTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAAC 5116 Query 112875 ATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACC 112934 ||| || | ||||| || ||| || | |||| || ||||| || ||||| ||| Sbjct 5117 ATCGCCCAGCACGGTCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACC 5176 Query 112935 GCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 | || ||| |||| || || || |||||||| ||||||||||| |||||||| Sbjct 5177 TCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTA 5229 Score = 82.4 bits (90), Expect = 9e-11 Identities = 167/248 (67%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || || |||||| | || ||| | || | || Sbjct 3757 CCCCAGCACATGCTCATGCGCGTGGCCATCGGTCTGCACAAGGACAACATCCCCGCCGTG 3816 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| |||||| |||| | | |||| |||||| || || || |||||| Sbjct 3817 ATCGAGACCTACGACCTCTTGTCGCAGCAGCTCTTCACCCACGCTACCCCGACGCTCTTC 3876 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || || || | || || |||| || ||||| | | | |||||||| Sbjct 3877 AACGCCGGCACCCCGCGTCCGCAGCTGTCGTCGTGCTTCCTGCTCACCATGAAGGAGGAC 3936 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || ||| | ||||| |||| ||| |||| | || |||| ||||| |||| ||| || Sbjct 3937 TCGATCGAGGGCATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCGGCCGGC 3996 Query 111852 GGTATCGG 111859 || ||||| Sbjct 3997 GGCATCGG 4004 >seq50985 Length=2480 Score = 107 bits (118), Expect = 2e-18 Identities = 191/277 (69%), Gaps = 5/277 (2%) Strand=Plus/Plus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| |||| || | ||||| | | |||||| | | ||||| |||||| | Sbjct 510 CTCATCGACACCTACGTCAAGGACGCCGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAG 569 Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAG--- 102164 || || || | | | ||||| || || ||||| ||||||||| | | | || Sbjct 570 ACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGT 629 Query 102165 -TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 ||| | |||| || ||||| ||| ||| ||| || || ||||| ||||||||||| Sbjct 630 GTCGAGA-CCTTCGCCGAGCGTCTCGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTC 688 Query 102224 TGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 102283 || ||||||| | || | |||||||||||||| || |||||||| || ||| ||| Sbjct 689 CGGCAGCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTT 748 Query 102284 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 | |||||| | ||| || || ||||| |||||| Sbjct 749 CAGTAACGAGATGATCAGCCGCGATGAGGGCCTCCAC 785 >seq50789 Length=2477 Score = 107 bits (118), Expect = 2e-18 Identities = 191/277 (69%), Gaps = 5/277 (2%) Strand=Plus/Minus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| |||| || | ||||| | | |||||| | | ||||| |||||| | Sbjct 1968 CTCATCGACACCTACGTCAAGGACGCCGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAG 1909 Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAG--- 102164 || || || | | | ||||| || || ||||| ||||||||| | | | || Sbjct 1908 ACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGT 1849 Query 102165 -TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 ||| | |||| || ||||| ||| ||| ||| || || ||||| ||||||||||| Sbjct 1848 GTCGAGA-CCTTCGCCGAGCGTCTCGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTC 1790 Query 102224 TGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 102283 || ||||||| | || | |||||||||||||| || |||||||| || ||| ||| Sbjct 1789 CGGCAGCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTT 1730 Query 102284 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 | |||||| | ||| || || ||||| |||||| Sbjct 1729 CAGTAACGAGATGATCAGCCGCGATGAGGGCCTCCAC 1693 >seq50610 Length=4059 Score = 107 bits (118), Expect = 2e-18 Identities = 191/277 (69%), Gaps = 5/277 (2%) Strand=Plus/Plus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| |||| || | ||||| | | |||||| | | ||||| |||||| | Sbjct 3419 CTCATCGACACCTACGTCAAGGACGCCGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAG 3478 Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAG--- 102164 || || || | | | ||||| || || ||||| ||||||||| | | | || Sbjct 3479 ACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGT 3538 Query 102165 -TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 ||| | |||| || ||||| ||| ||| ||| || || ||||| ||||||||||| Sbjct 3539 GTCGAGA-CCTTCGCCGAGCGTCTCGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTC 3597 Query 102224 TGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 102283 || ||||||| | || | |||||||||||||| || |||||||| || ||| ||| Sbjct 3598 CGGCAGCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTT 3657 Query 102284 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 | |||||| | ||| || || ||||| |||||| Sbjct 3658 CAGTAACGAGATGATCAGCCGCGATGAGGGCCTCCAC 3694 >seq50609 Length=4102 Score = 107 bits (118), Expect = 2e-18 Identities = 191/277 (69%), Gaps = 5/277 (2%) Strand=Plus/Plus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| |||| || | ||||| | | |||||| | | ||||| |||||| | Sbjct 3462 CTCATCGACACCTACGTCAAGGACGCCGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAG 3521 Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAG--- 102164 || || || | | | ||||| || || ||||| ||||||||| | | | || Sbjct 3522 ACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGT 3581 Query 102165 -TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 ||| | |||| || ||||| ||| ||| ||| || || ||||| ||||||||||| Sbjct 3582 GTCGAGA-CCTTCGCCGAGCGTCTCGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTC 3640 Query 102224 TGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 102283 || ||||||| | || | |||||||||||||| || |||||||| || ||| ||| Sbjct 3641 CGGCAGCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTT 3700 Query 102284 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 | |||||| | ||| || || ||||| |||||| Sbjct 3701 CAGTAACGAGATGATCAGCCGCGATGAGGGCCTCCAC 3737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620218966730480