Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq58068 183 4e-41 seq54405 183 4e-41 seq54404 183 4e-41 seq50985 107 2e-18 seq50789 107 2e-18 seq50610 107 2e-18 seq50609 107 2e-18 >seq58068 Length=5899 Score = 183 bits (202), Expect = 4e-41 Identities = 879/1373 (64%), Gaps = 52/1373 (4%) Strand=Plus/Plus Query 109407 GCGAAGATAATACATACCCGTTTTGAGACCAGCCTT---CCATGCGTACATATGCATTGA 109463 |||||| || ||||| || || ||||| || ||| ||| ||||| | ||||| || Sbjct 3603 GCGAAGGTAGTACATGCCGGTCTTGAGGCC---CTTGCGCCAGGCGTAGAAGTGCATCGA 3659 Query 109464 AGAGAGTTTGGAAAGTGTCGGACTCTCC-ATAAACAAGTTCATCGACTGAGACTGATCGA 109522 | ||| |||| || | || ||| || || | | ||| | |||||| ||| |||| Sbjct 3660 GGTGAGCTTGGCAAACGAGGG-CTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGA 3718 Query 109523 TGAATCGACCA-CGATCAGCCGCCATGTCGATGAT-ACACTTTTGGCTAATTTCCCAGAC 109580 || | | | | ||||| || |||||||||||||| || | | | | | |||| || Sbjct 3719 TGTAG-GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCT-CCCACAC 3776 Query 109581 AGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACC 109640 |||||||||| |||||||| || ||||| || ||| ||||| || | ||||| Sbjct 3777 GGTCTTGTACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTT 3836 Query 109641 AGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTC 109700 | || | | ||| | | | ||||||||| ||| || | ||| ||| Sbjct 3837 GTGCGAGACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCG 3896 Query 109701 AACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTT 109760 | ||| |||| |||||| ||| || || || || || |||| ||| ||||||||| Sbjct 3897 CAGAAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTT 3956 Query 109761 AGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGG 109820 ||||||||||| || || ||||| |||||||| ||||| || | || || || ||||| Sbjct 3957 GGTCGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGG 4016 Query 109821 CATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTCTTTACCCGCTCACGCATT 109878 |||||| |||| ||| || ||| || ||||| | | | | | | | ||| Sbjct 4017 CATGGGCGCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGAT----GTTGGCGCGGA 4072 Query 109879 GCGT--CCCAATCATAAC-GACC-ACTAAATTTAGTCTCACCATCCCACATATCTGGTTG 109934 |||| |||| || | | | || || | | | | |||| | || || || Sbjct 4073 GCGTGGCCCAGTCCCACCTGTCCGAC--------GGCACGACGCCCCAGAGGTCGGGCTG 4124 Query 109935 AAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGC 109994 || |||| | || || || |||| | | ||| ||| | ||||| |||| || Sbjct 4125 GAGCTTGCCCTTGGACGCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGC 4184 Query 109995 CAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCAT 110054 | |||| || || | || || || | || || ||||| || || | || | | Sbjct 4185 GAGCTCGTTCGAGGCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGAT-GGCGCGGT--T 4241 Query 110055 GAG---GCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAG 110111 ||| ||| | ||| || | || | || | | | || || || || || || Sbjct 4242 GAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAG 4301 Query 110112 ACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTAC 110171 ||||| || |||| || ||||| | || |||||| ||| || || || Sbjct 4302 GCCCTGCACTCCGATGCCGATGGGCCTGTGGCGCATGTTCGAGTTGCGGGCCTCGGGCAC 4361 Query 110172 GGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTC 110231 |||||| ||||| |||||| ||| ||||| ||||| || || |||| || || Sbjct 4362 GGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTC 4421 Query 110232 ATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAAT 110291 || || || | || || ||| ||| | || ||| | ||||| || || | Sbjct 4422 GTGCAGCTTCTGGTGGTCAAAC----TCG--CCGTTGGTGATGAACTTGGGCAGCGCGAG 4475 Query 110292 AGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCG--GTGTATTCCAAAATTTCCGTA 110349 || || || |||||||| | |||||| | || ||||| | | | ||||| Sbjct 4476 CGAGGCCAGGTTGCACACGGCCACCTCGTC--GGGCGACGTGTACTGGACGACCTCCGTG 4533 Query 110350 CACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCA 110409 |||| ||| || || ||| || | || || ||| || || ||| |||||| || Sbjct 4534 CACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCG 4593 Query 110410 TCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCAT 110469 ||||| || |||||||| || || || || || |||| |||| ||| ||||| ||| Sbjct 4594 TCCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCAC 4653 Query 110470 ACATCGGCGGCGGGGAC--AGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACA 110527 | || ||| ||| | ||| ||| | || |||| |||||| |||| Sbjct 4654 AGCTCCTGGGCCTTGACCACGCGGCG--CGCGCGGCCCTCCTGCTCGTAGCGCTCGTACT 4711 Query 110528 AGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGA 110587 ||||| || |||| || || || | || || |||| || ||| || |||| Sbjct 4712 TCTCCTCGAACTCCTTGCCCCACGAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGA 4771 Query 110588 GGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG 110647 | ||||| | || || ||| || | ||||||||||||||| |||||||||| |||| Sbjct 4772 GCGACCAGTCGCCGCCAGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACA-GGCCG 4830 Query 110648 -AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAG 110706 |||| || || ||| || ||| || | || ||||| || || | ||| Sbjct 4831 TAGAAGAGATCGCGGGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAG 4890 Query 110707 TCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759 || | ||| |||| |||||| || || || |||| |||| | ||||| || Sbjct 4891 TCAAAGATGTCCGCGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCCTTGCG 4943 >seq54405 Length=5848 Score = 183 bits (202), Expect = 4e-41 Identities = 879/1373 (64%), Gaps = 52/1373 (4%) Strand=Plus/Minus Query 109407 GCGAAGATAATACATACCCGTTTTGAGACCAGCCTT---CCATGCGTACATATGCATTGA 109463 |||||| || ||||| || || ||||| || ||| ||| ||||| | ||||| || Sbjct 5665 GCGAAGGTAGTACATGCCGGTCTTGAGGCC---CTTGCGCCAGGCGTAGAAGTGCATCGA 5609 Query 109464 AGAGAGTTTGGAAAGTGTCGGACTCTCC-ATAAACAAGTTCATCGACTGAGACTGATCGA 109522 | ||| |||| || | || ||| || || | | ||| | |||||| ||| |||| Sbjct 5608 GGTGAGCTTGGCAAACGAGGG-CTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGA 5550 Query 109523 TGAATCGACCA-CGATCAGCCGCCATGTCGATGAT-ACACTTTTGGCTAATTTCCCAGAC 109580 || | | | | ||||| || |||||||||||||| || | | | | | |||| || Sbjct 5549 TGTAG-GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCT-CCCACAC 5492 Query 109581 AGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACC 109640 |||||||||| |||||||| || ||||| || ||| ||||| || | ||||| Sbjct 5491 GGTCTTGTACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTT 5432 Query 109641 AGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTC 109700 | || | | ||| | | | ||||||||| ||| || | ||| ||| Sbjct 5431 GTGCGAGACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCG 5372 Query 109701 AACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTT 109760 | ||| |||| |||||| ||| || || || || || |||| ||| ||||||||| Sbjct 5371 CAGAAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTT 5312 Query 109761 AGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGG 109820 ||||||||||| || || ||||| |||||||| ||||| || | || || || ||||| Sbjct 5311 GGTCGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGG 5252 Query 109821 CATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTCTTTACCCGCTCACGCATT 109878 |||||| |||| ||| || ||| || ||||| | | | | | | | ||| Sbjct 5251 CATGGGCGCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGAT----GTTGGCGCGGA 5196 Query 109879 GCGT--CCCAATCATAAC-GACC-ACTAAATTTAGTCTCACCATCCCACATATCTGGTTG 109934 |||| |||| || | | | || || | | | | |||| | || || || Sbjct 5195 GCGTGGCCCAGTCCCACCTGTCCGAC--------GGCACGACGCCCCAGAGGTCGGGCTG 5144 Query 109935 AAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGC 109994 || |||| | || || || |||| | | ||| ||| | ||||| |||| || Sbjct 5143 GAGCTTGCCCTTGGACGCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGC 5084 Query 109995 CAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCAT 110054 | |||| || || | || || || | || || ||||| || || | || | | Sbjct 5083 GAGCTCGTTCGAGGCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGAT-GGCGCGGT--T 5027 Query 110055 GAG---GCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAG 110111 ||| ||| | ||| || | || | || | | | || || || || || || Sbjct 5026 GAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAG 4967 Query 110112 ACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTAC 110171 ||||| || |||| || ||||| | || |||||| ||| || || || Sbjct 4966 GCCCTGCACTCCGATGCCGATGGGCCTGTGGCGCATGTTCGAGTTGCGGGCCTCGGGCAC 4907 Query 110172 GGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTC 110231 |||||| ||||| |||||| ||| ||||| ||||| || || |||| || || Sbjct 4906 GGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTC 4847 Query 110232 ATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAAT 110291 || || || | || || ||| ||| | || ||| | ||||| || || | Sbjct 4846 GTGCAGCTTCTGGTGGTCAAAC----TCG--CCGTTGGTGATGAACTTGGGCAGCGCGAG 4793 Query 110292 AGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCG--GTGTATTCCAAAATTTCCGTA 110349 || || || |||||||| | |||||| | || ||||| | | | ||||| Sbjct 4792 CGAGGCCAGGTTGCACACGGCCACCTCGTC--GGGCGACGTGTACTGGACGACCTCCGTG 4735 Query 110350 CACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCA 110409 |||| ||| || || ||| || | || || ||| || || ||| |||||| || Sbjct 4734 CACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCG 4675 Query 110410 TCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCAT 110469 ||||| || |||||||| || || || || || |||| |||| ||| ||||| ||| Sbjct 4674 TCCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCAC 4615 Query 110470 ACATCGGCGGCGGGGAC--AGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACA 110527 | || ||| ||| | ||| ||| | || |||| |||||| |||| Sbjct 4614 AGCTCCTGGGCCTTGACCACGCGGCG--CGCGCGGCCCTCCTGCTCGTAGCGCTCGTACT 4557 Query 110528 AGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGA 110587 ||||| || |||| || || || | || || |||| || ||| || |||| Sbjct 4556 TCTCCTCGAACTCCTTGCCCCACGAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGA 4497 Query 110588 GGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG 110647 | ||||| | || || ||| || | ||||||||||||||| |||||||||| |||| Sbjct 4496 GCGACCAGTCGCCGCCAGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACA-GGCCG 4438 Query 110648 -AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAG 110706 |||| || || ||| || ||| || | || ||||| || || | ||| Sbjct 4437 TAGAAGAGATCGCGGGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAG 4378 Query 110707 TCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759 || | ||| |||| |||||| || || || |||| |||| | ||||| || Sbjct 4377 TCAAAGATGTCCGCGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCCTTGCG 4325 >seq54404 Length=5758 Score = 183 bits (202), Expect = 4e-41 Identities = 879/1373 (64%), Gaps = 52/1373 (4%) Strand=Plus/Minus Query 109407 GCGAAGATAATACATACCCGTTTTGAGACCAGCCTT---CCATGCGTACATATGCATTGA 109463 |||||| || ||||| || || ||||| || ||| ||| ||||| | ||||| || Sbjct 5575 GCGAAGGTAGTACATGCCGGTCTTGAGGCC---CTTGCGCCAGGCGTAGAAGTGCATCGA 5519 Query 109464 AGAGAGTTTGGAAAGTGTCGGACTCTCC-ATAAACAAGTTCATCGACTGAGACTGATCGA 109522 | ||| |||| || | || ||| || || | | ||| | |||||| ||| |||| Sbjct 5518 GGTGAGCTTGGCAAACGAGGG-CTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGA 5460 Query 109523 TGAATCGACCA-CGATCAGCCGCCATGTCGATGAT-ACACTTTTGGCTAATTTCCCAGAC 109580 || | | | | ||||| || |||||||||||||| || | | | | | |||| || Sbjct 5459 TGTAG-GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCT-CCCACAC 5402 Query 109581 AGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACC 109640 |||||||||| |||||||| || ||||| || ||| ||||| || | ||||| Sbjct 5401 GGTCTTGTACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTT 5342 Query 109641 AGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTC 109700 | || | | ||| | | | ||||||||| ||| || | ||| ||| Sbjct 5341 GTGCGAGACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCG 5282 Query 109701 AACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTT 109760 | ||| |||| |||||| ||| || || || || || |||| ||| ||||||||| Sbjct 5281 CAGAAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTT 5222 Query 109761 AGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGG 109820 ||||||||||| || || ||||| |||||||| ||||| || | || || || ||||| Sbjct 5221 GGTCGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGG 5162 Query 109821 CATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTCTTTACCCGCTCACGCATT 109878 |||||| |||| ||| || ||| || ||||| | | | | | | | ||| Sbjct 5161 CATGGGCGCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGAT----GTTGGCGCGGA 5106 Query 109879 GCGT--CCCAATCATAAC-GACC-ACTAAATTTAGTCTCACCATCCCACATATCTGGTTG 109934 |||| |||| || | | | || || | | | | |||| | || || || Sbjct 5105 GCGTGGCCCAGTCCCACCTGTCCGAC--------GGCACGACGCCCCAGAGGTCGGGCTG 5054 Query 109935 AAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGC 109994 || |||| | || || || |||| | | ||| ||| | ||||| |||| || Sbjct 5053 GAGCTTGCCCTTGGACGCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGC 4994 Query 109995 CAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCAT 110054 | |||| || || | || || || | || || ||||| || || | || | | Sbjct 4993 GAGCTCGTTCGAGGCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGAT-GGCGCGGT--T 4937 Query 110055 GAG---GCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAG 110111 ||| ||| | ||| || | || | || | | | || || || || || || Sbjct 4936 GAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAG 4877 Query 110112 ACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTAC 110171 ||||| || |||| || ||||| | || |||||| ||| || || || Sbjct 4876 GCCCTGCACTCCGATGCCGATGGGCCTGTGGCGCATGTTCGAGTTGCGGGCCTCGGGCAC 4817 Query 110172 GGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTC 110231 |||||| ||||| |||||| ||| ||||| ||||| || || |||| || || Sbjct 4816 GGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTC 4757 Query 110232 ATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAAT 110291 || || || | || || ||| ||| | || ||| | ||||| || || | Sbjct 4756 GTGCAGCTTCTGGTGGTCAAAC----TCG--CCGTTGGTGATGAACTTGGGCAGCGCGAG 4703 Query 110292 AGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCG--GTGTATTCCAAAATTTCCGTA 110349 || || || |||||||| | |||||| | || ||||| | | | ||||| Sbjct 4702 CGAGGCCAGGTTGCACACGGCCACCTCGTC--GGGCGACGTGTACTGGACGACCTCCGTG 4645 Query 110350 CACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCA 110409 |||| ||| || || ||| || | || || ||| || || ||| |||||| || Sbjct 4644 CACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCG 4585 Query 110410 TCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCAT 110469 ||||| || |||||||| || || || || || |||| |||| ||| ||||| ||| Sbjct 4584 TCCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCAC 4525 Query 110470 ACATCGGCGGCGGGGAC--AGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACA 110527 | || ||| ||| | ||| ||| | || |||| |||||| |||| Sbjct 4524 AGCTCCTGGGCCTTGACCACGCGGCG--CGCGCGGCCCTCCTGCTCGTAGCGCTCGTACT 4467 Query 110528 AGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGA 110587 ||||| || |||| || || || | || || |||| || ||| || |||| Sbjct 4466 TCTCCTCGAACTCCTTGCCCCACGAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGA 4407 Query 110588 GGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG 110647 | ||||| | || || ||| || | ||||||||||||||| |||||||||| |||| Sbjct 4406 GCGACCAGTCGCCGCCAGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACA-GGCCG 4348 Query 110648 -AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAG 110706 |||| || || ||| || ||| || | || ||||| || || | ||| Sbjct 4347 TAGAAGAGATCGCGGGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAG 4288 Query 110707 TCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759 || | ||| |||| |||||| || || || |||| |||| | ||||| || Sbjct 4287 TCAAAGATGTCCGCGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCCTTGCG 4235 >seq50985 Length=2480 Score = 107 bits (118), Expect = 2e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || ||||| || ||| | ||| ||||||||| || || |||||||| || Sbjct 784 TGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCG 725 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| || || || || || |||||||||||||| || | Sbjct 724 CGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCG 665 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGA-----CTTGTCGAACCACTTGAGA 119681 ||||| ||| |||||||| || || | |||| | ||||| || |||||| | Sbjct 664 GCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTTGTTGATCCACTTCATC 605 Query 119682 GCCCAGTTGGCCTT 119695 ||||||| |||||| Sbjct 604 GCCCAGTCGGCCTT 591 >seq50789 Length=2477 Score = 107 bits (118), Expect = 2e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || ||||| || ||| | ||| ||||||||| || || |||||||| || Sbjct 1694 TGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCG 1753 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| || || || || || |||||||||||||| || | Sbjct 1754 CGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCG 1813 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGA-----CTTGTCGAACCACTTGAGA 119681 ||||| ||| |||||||| || || | |||| | ||||| || |||||| | Sbjct 1814 GCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTTGTTGATCCACTTCATC 1873 Query 119682 GCCCAGTTGGCCTT 119695 ||||||| |||||| Sbjct 1874 GCCCAGTCGGCCTT 1887 >seq50610 Length=4059 Score = 107 bits (118), Expect = 2e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || ||||| || ||| | ||| ||||||||| || || |||||||| || Sbjct 3693 TGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCG 3634 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| || || || || || |||||||||||||| || | Sbjct 3633 CGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCG 3574 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGA-----CTTGTCGAACCACTTGAGA 119681 ||||| ||| |||||||| || || | |||| | ||||| || |||||| | Sbjct 3573 GCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTTGTTGATCCACTTCATC 3514 Query 119682 GCCCAGTTGGCCTT 119695 ||||||| |||||| Sbjct 3513 GCCCAGTCGGCCTT 3500 >seq50609 Length=4102 Score = 107 bits (118), Expect = 2e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || ||||| || ||| | ||| ||||||||| || || |||||||| || Sbjct 3736 TGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCG 3677 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| || || || || || |||||||||||||| || | Sbjct 3676 CGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCG 3617 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGA-----CTTGTCGAACCACTTGAGA 119681 ||||| ||| |||||||| || || | |||| | ||||| || |||||| | Sbjct 3616 GCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTTGTTGATCCACTTCATC 3557 Query 119682 GCCCAGTTGGCCTT 119695 ||||||| |||||| Sbjct 3556 GCCCAGTCGGCCTT 3543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588479353350200