Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq50985 214 3e-50 seq50789 214 3e-50 seq50610 214 3e-50 seq50609 214 3e-50 seq58068 181 2e-40 seq54405 181 2e-40 seq54404 181 2e-40 >seq50985 Length=2480 Score = 214 bits (236), Expect = 3e-50 Identities = 453/661 (69%), Gaps = 34/661 (5%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | ||| |||||| ||||| || | |||||| Sbjct 243 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAAGTCGATCTG 302 Query 25537 GCCAAGGACATGGACGGCTGGTA--CGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT 25594 | |||||| | |||| | ||||| | ||| |||||| ||| || ||||| Sbjct 303 AGCTCCGACATGAAGCACTGGGAGTCGCTCAA--CAACGACGAGAGGCACTTCATCAAGC 360 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 |||| |||| ||||| || || || || || ||| ||||||||| || | | Sbjct 361 ACGTCCTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCCGGCCGCT 420 Query 25655 TCACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 ||| | ||| || ||| ||| ||||| || |||||||| || || || |||| Sbjct 421 TCATGAAGGAGGTACAG---GTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATCGCCA 477 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 |||| || | ||||| ||| |||| | ||| || || || ||| | | |||| Sbjct 478 TCGAGAACATCCACTCCGAGATGTACTC---GCTCCTCATCGACACCTACGTCAAGGACG 534 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 || ||||| || || || || | ||||||||| | | ||| |||||| ||||| Sbjct 535 CCGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAGG 594 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG---CGCTACGTTTGGCGAGCGGCTGG 25885 | ||||| |||||||||||||||| || | || || || | |||||| || | Sbjct 595 CCGACTGGGCGATGAAGTGGATCAACAAGGAGGGTGTCGAGACCTTCGCCGAGCGTCTCG 654 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGG 25944 | | || || || || ||||||||||| ||| ||| || ||| ||||||||||| Sbjct 655 TCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCT-CCATCTTCTGG 713 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || || ||||||||| || ||| |||||| | |||||| | || Sbjct 714 CTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCGAT 773 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA--CTTGCTCCACAAAC 26062 ||||| |||||| | || || |||||||| ||||||| ||| || | || |||| | Sbjct 774 GAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACA----CCATGCTCG-TCAACAAGC 828 Query 26063 CTTCTCAAGAGAC-CGTCTA--CAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGT 26119 | ||| | ||| | | | ||| |||||| |||||||| ||||| |||||||| | Sbjct 829 C--CTCGACCGACGTGCCCAAGCAG-ATCATCCTCGAGGCTGTCGAGATTGAGAAGGAAT 885 Query 26120 T 26120 | Sbjct 886 T 886 >seq50789 Length=2477 Score = 214 bits (236), Expect = 3e-50 Identities = 453/661 (69%), Gaps = 34/661 (5%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | ||| |||||| ||||| || | |||||| Sbjct 2235 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAAGTCGATCTG 2176 Query 25537 GCCAAGGACATGGACGGCTGGTA--CGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT 25594 | |||||| | |||| | ||||| | ||| |||||| ||| || ||||| Sbjct 2175 AGCTCCGACATGAAGCACTGGGAGTCGCTCAA--CAACGACGAGAGGCACTTCATCAAGC 2118 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 |||| |||| ||||| || || || || || ||| ||||||||| || | | Sbjct 2117 ACGTCCTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCCGGCCGCT 2058 Query 25655 TCACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 ||| | ||| || ||| ||| ||||| || |||||||| || || || |||| Sbjct 2057 TCATGAAGGAGGTACAG---GTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATCGCCA 2001 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 |||| || | ||||| ||| |||| | ||| || || || ||| | | |||| Sbjct 2000 TCGAGAACATCCACTCCGAGATGTACTC---GCTCCTCATCGACACCTACGTCAAGGACG 1944 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 || ||||| || || || || | ||||||||| | | ||| |||||| ||||| Sbjct 1943 CCGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAGG 1884 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG---CGCTACGTTTGGCGAGCGGCTGG 25885 | ||||| |||||||||||||||| || | || || || | |||||| || | Sbjct 1883 CCGACTGGGCGATGAAGTGGATCAACAAGGAGGGTGTCGAGACCTTCGCCGAGCGTCTCG 1824 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGG 25944 | | || || || || ||||||||||| ||| ||| || ||| ||||||||||| Sbjct 1823 TCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCT-CCATCTTCTGG 1765 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || || ||||||||| || ||| |||||| | |||||| | || Sbjct 1764 CTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCGAT 1705 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA--CTTGCTCCACAAAC 26062 ||||| |||||| | || || |||||||| ||||||| ||| || | || |||| | Sbjct 1704 GAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACA----CCATGCTCG-TCAACAAGC 1650 Query 26063 CTTCTCAAGAGAC-CGTCTA--CAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGT 26119 | ||| | ||| | | | ||| |||||| |||||||| ||||| |||||||| | Sbjct 1649 C--CTCGACCGACGTGCCCAAGCAG-ATCATCCTCGAGGCTGTCGAGATTGAGAAGGAAT 1593 Query 26120 T 26120 | Sbjct 1592 T 1592 >seq50610 Length=4059 Score = 214 bits (236), Expect = 3e-50 Identities = 453/661 (69%), Gaps = 34/661 (5%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | ||| |||||| ||||| || | |||||| Sbjct 3152 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAAGTCGATCTG 3211 Query 25537 GCCAAGGACATGGACGGCTGGTA--CGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT 25594 | |||||| | |||| | ||||| | ||| |||||| ||| || ||||| Sbjct 3212 AGCTCCGACATGAAGCACTGGGAGTCGCTCAA--CAACGACGAGAGGCACTTCATCAAGC 3269 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 |||| |||| ||||| || || || || || ||| ||||||||| || | | Sbjct 3270 ACGTCCTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCCGGCCGCT 3329 Query 25655 TCACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 ||| | ||| || ||| ||| ||||| || |||||||| || || || |||| Sbjct 3330 TCATGAAGGAGGTACAG---GTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATCGCCA 3386 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 |||| || | ||||| ||| |||| | ||| || || || ||| | | |||| Sbjct 3387 TCGAGAACATCCACTCCGAGATGTACTC---GCTCCTCATCGACACCTACGTCAAGGACG 3443 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 || ||||| || || || || | ||||||||| | | ||| |||||| ||||| Sbjct 3444 CCGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAGG 3503 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG---CGCTACGTTTGGCGAGCGGCTGG 25885 | ||||| |||||||||||||||| || | || || || | |||||| || | Sbjct 3504 CCGACTGGGCGATGAAGTGGATCAACAAGGAGGGTGTCGAGACCTTCGCCGAGCGTCTCG 3563 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGG 25944 | | || || || || ||||||||||| ||| ||| || ||| ||||||||||| Sbjct 3564 TCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCT-CCATCTTCTGG 3622 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || || ||||||||| || ||| |||||| | |||||| | || Sbjct 3623 CTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCGAT 3682 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA--CTTGCTCCACAAAC 26062 ||||| |||||| | || || |||||||| ||||||| ||| || | || |||| | Sbjct 3683 GAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACA----CCATGCTCG-TCAACAAGC 3737 Query 26063 CTTCTCAAGAGAC-CGTCTA--CAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGT 26119 | ||| | ||| | | | ||| |||||| |||||||| ||||| |||||||| | Sbjct 3738 C--CTCGACCGACGTGCCCAAGCAG-ATCATCCTCGAGGCTGTCGAGATTGAGAAGGAAT 3794 Query 26120 T 26120 | Sbjct 3795 T 3795 >seq50609 Length=4102 Score = 214 bits (236), Expect = 3e-50 Identities = 453/661 (69%), Gaps = 34/661 (5%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | ||| |||||| ||||| || | |||||| Sbjct 3195 ATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAAGTCGATCTG 3254 Query 25537 GCCAAGGACATGGACGGCTGGTA--CGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT 25594 | |||||| | |||| | ||||| | ||| |||||| ||| || ||||| Sbjct 3255 AGCTCCGACATGAAGCACTGGGAGTCGCTCAA--CAACGACGAGAGGCACTTCATCAAGC 3312 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 |||| |||| ||||| || || || || || ||| ||||||||| || | | Sbjct 3313 ACGTCCTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCCGGCCGCT 3372 Query 25655 TCACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 ||| | ||| || ||| ||| ||||| || |||||||| || || || |||| Sbjct 3373 TCATGAAGGAGGTACAG---GTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATCGCCA 3429 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 |||| || | ||||| ||| |||| | ||| || || || ||| | | |||| Sbjct 3430 TCGAGAACATCCACTCCGAGATGTACTC---GCTCCTCATCGACACCTACGTCAAGGACG 3486 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 || ||||| || || || || | ||||||||| | | ||| |||||| ||||| Sbjct 3487 CCGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAGG 3546 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG---CGCTACGTTTGGCGAGCGGCTGG 25885 | ||||| |||||||||||||||| || | || || || | |||||| || | Sbjct 3547 CCGACTGGGCGATGAAGTGGATCAACAAGGAGGGTGTCGAGACCTTCGCCGAGCGTCTCG 3606 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGG 25944 | | || || || || ||||||||||| ||| ||| || ||| ||||||||||| Sbjct 3607 TCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCT-CCATCTTCTGG 3665 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || || ||||||||| || ||| |||||| | |||||| | || Sbjct 3666 CTCAAGAAGCGCGGCCTCATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCGAT 3725 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA--CTTGCTCCACAAAC 26062 ||||| |||||| | || || |||||||| ||||||| ||| || | || |||| | Sbjct 3726 GAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACA----CCATGCTCG-TCAACAAGC 3780 Query 26063 CTTCTCAAGAGAC-CGTCTA--CAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGT 26119 | ||| | ||| | | | ||| |||||| |||||||| ||||| |||||||| | Sbjct 3781 C--CTCGACCGACGTGCCCAAGCAG-ATCATCCTCGAGGCTGTCGAGATTGAGAAGGAAT 3837 Query 26120 T 26120 | Sbjct 3838 T 3838 >seq58068 Length=5899 Score = 181 bits (200), Expect = 2e-40 Identities = 460/690 (67%), Gaps = 35/690 (5%) Strand=Plus/Plus Query 221492 CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTC 221551 ||||| ||| |||||||||||||| ||||| |||||||| |||||||||||||| | | Sbjct 4276 CGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCCGATGGGCCTGTGGCGC 4335 Query 221552 CTGTTGGA--AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGA 221609 |||| || |||| || || |||||||| || |||||| |||||||| ||||||| Sbjct 4336 ATGTTCGAGTTGCGG--GCCTCGGGCACGGGGTAGTAGTTGATGTCGATCACCTTGTTGA 4393 Query 221610 GGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGC 221669 ||||| |||| || || || || ||| |||||||||||| | | ||||||| Sbjct 4394 GGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTGGT------CAAACTCGC 4447 Query 221670 CGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGG 221729 || | ||| | || | |||| | || | ||||||||| ||||||| Sbjct 4448 CG--TTGGTGATGAACTTGGGC---AGCG---CGAGCGA----GGCCAGGTTGCACACGG 4495 Query 221730 CCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGG 221789 |||||||||| || ||||| | || ||| || || ||||| ||| ||||| Sbjct 4496 CCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTGGATGG 4555 Query 221790 TCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGAC 221849 | || ||||| | || || ||||||| ||| ||||||||||| ||||| |||| Sbjct 4556 TGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTAGGGCG 4615 Query 221850 CGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCC 221909 ||| ||||| | ||| | | | || || | ||| || || |||| || | || Sbjct 4616 TGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTC-CTGGGCCT---TGACC 4671 Query 221910 TCTTGACTGCACCCTCGG----TCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCA 221965 | | || | | ||| || || || | || | || |||| | Sbjct 4672 AC---GCGGCGCGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTG 4728 Query 221966 CCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGT-GCTTGTT 222024 || ||| ||| |||||| || | | ||| || | || ||||| || Sbjct 4729 CCCCACGAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCCA 4788 Query 222025 GTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGT 222084 ||| | || | || |||||| ||||| || |||||||| | | |||||||| | || Sbjct 4789 GTC-TCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGC 4847 Query 222085 CCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTG 222144 || | ||||||| ||||| ||| ||| |||| || | || ||||| ||||| ||||| Sbjct 4848 GCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGCGTG 4907 Query 222145 CCACGGCTCCAGATAGACGGCCAGAGCGCC 222174 ||| ||||| || |||| ||| | ||| || Sbjct 4908 CCAGGGCTCAAGGTAGATGGCGAAAGCACC 4937 Score = 109 bits (120), Expect = 1e-18 Identities = 229/334 (69%), Gaps = 8/334 (2%) Strand=Plus/Plus Query 222310 GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCC 222369 |||||| || ||||| || ||||| | |||||| |||||| ||||| |||||| Sbjct 5173 GCCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCC 5232 Query 222370 CTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGA 222429 ||| || ||||||||||| | | | ||||| || || ||||||| ||| | | || Sbjct 5233 CTCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGT 5292 Query 222430 ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT-AGACATCAGATCGT 222488 | |||||| || ||||| || | ||||| || ||| ||| || |||| || |||| Sbjct 5293 GCCGGCGTTGAAGAGCGTCGGGGTAGCGTGGGTGAAG-AGCTGCTGCGACAAGAGGTCGT 5351 Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACA 222548 | ||||| | || || |||||||||| ||| | ||||| | |||| || Sbjct 5352 AGGTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCA 5411 Query 222549 TGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCA 222605 ||| |||||| | ||| || | | || | || | || || ||||| || || | Sbjct 5412 TGTGCTGGGGTCGCTCGAC-GATCTTGCCGTCGACCCTGA-AG-AGGTAGGAGCGCTCGA 5468 Query 222606 GAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTC 222639 | |||||||| ||||||||| || || ||||| Sbjct 5469 GGGTCTTGAAGCCAAAGTAGGTGTAGTTGAAGTC 5502 >seq54405 Length=5848 Score = 181 bits (200), Expect = 2e-40 Identities = 460/690 (67%), Gaps = 35/690 (5%) Strand=Plus/Minus Query 221492 CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTC 221551 ||||| ||| |||||||||||||| ||||| |||||||| |||||||||||||| | | Sbjct 4992 CGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCCGATGGGCCTGTGGCGC 4933 Query 221552 CTGTTGGAA--GCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGA 221609 |||| || |||| || || |||||||| || |||||| |||||||| ||||||| Sbjct 4932 ATGTTCGAGTTGCGG--GCCTCGGGCACGGGGTAGTAGTTGATGTCGATCACCTTGTTGA 4875 Query 221610 GGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGC 221669 ||||| |||| || || || || ||| |||||||||||| | | ||||||| Sbjct 4874 GGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTGGT------CAAACTCGC 4821 Query 221670 CGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGG 221729 || | ||| | || | |||| | || | ||||||||| ||||||| Sbjct 4820 CG--TTGGTGATGAACTTGGGC---AGCG---CGAGCGA----GGCCAGGTTGCACACGG 4773 Query 221730 CCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGG 221789 |||||||||| || ||||| | || ||| || || ||||| ||| ||||| Sbjct 4772 CCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTGGATGG 4713 Query 221790 TCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGAC 221849 | || ||||| | || || ||||||| ||| ||||||||||| ||||| |||| Sbjct 4712 TGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTAGGGCG 4653 Query 221850 CGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCC 221909 ||| ||||| | ||| | | | || || | ||| || || |||| || | || Sbjct 4652 TGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTC-CTGGGCCT---TGACC 4597 Query 221910 TCTTGACTGCACCCTCGG----TCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCA 221965 | | || | | ||| || || || | || | || |||| | Sbjct 4596 AC---GCGGCGCGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTG 4540 Query 221966 CCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGT-GCTTGTT 222024 || ||| ||| |||||| || | | ||| || | || ||||| || Sbjct 4539 CCCCACGAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCCA 4480 Query 222025 GTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGT 222084 ||| | || | || |||||| ||||| || |||||||| | | |||||||| | || Sbjct 4479 GTC-TCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGC 4421 Query 222085 CCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTG 222144 || | ||||||| ||||| ||| ||| |||| || | || ||||| ||||| ||||| Sbjct 4420 GCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGCGTG 4361 Query 222145 CCACGGCTCCAGATAGACGGCCAGAGCGCC 222174 ||| ||||| || |||| ||| | ||| || Sbjct 4360 CCAGGGCTCAAGGTAGATGGCGAAAGCACC 4331 Score = 109 bits (120), Expect = 1e-18 Identities = 229/334 (69%), Gaps = 8/334 (2%) Strand=Plus/Minus Query 222310 GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCC 222369 |||||| || ||||| || ||||| | |||||| |||||| ||||| |||||| Sbjct 4095 GCCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCC 4036 Query 222370 CTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGA 222429 ||| || ||||||||||| | | | ||||| || || ||||||| ||| | | || Sbjct 4035 CTCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGT 3976 Query 222430 ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT-AGACATCAGATCGT 222488 | |||||| || ||||| || | ||||| || ||| ||| || |||| || |||| Sbjct 3975 GCCGGCGTTGAAGAGCGTCGGGGTAGCGTGGGTGAAG-AGCTGCTGCGACAAGAGGTCGT 3917 Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACA 222548 | ||||| | || || |||||||||| ||| | ||||| | |||| || Sbjct 3916 AGGTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCA 3857 Query 222549 TGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCA 222605 ||| |||||| | ||| || | | || | || | || || ||||| || || | Sbjct 3856 TGTGCTGGGGTCGCTCGAC-GATCTTGCCGTCGACCCTGA-AG-AGGTAGGAGCGCTCGA 3800 Query 222606 GAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTC 222639 | |||||||| ||||||||| || || ||||| Sbjct 3799 GGGTCTTGAAGCCAAAGTAGGTGTAGTTGAAGTC 3766 >seq54404 Length=5758 Score = 181 bits (200), Expect = 2e-40 Identities = 460/690 (67%), Gaps = 35/690 (5%) Strand=Plus/Minus Query 221492 CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTC 221551 ||||| ||| |||||||||||||| ||||| |||||||| |||||||||||||| | | Sbjct 4902 CGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCCGATGGGCCTGTGGCGC 4843 Query 221552 CTGTTGGAA--GCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGA 221609 |||| || |||| || || |||||||| || |||||| |||||||| ||||||| Sbjct 4842 ATGTTCGAGTTGCGG--GCCTCGGGCACGGGGTAGTAGTTGATGTCGATCACCTTGTTGA 4785 Query 221610 GGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGC 221669 ||||| |||| || || || || ||| |||||||||||| | | ||||||| Sbjct 4784 GGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTGGT------CAAACTCGC 4731 Query 221670 CGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGG 221729 || | ||| | || | |||| | || | ||||||||| ||||||| Sbjct 4730 CG--TTGGTGATGAACTTGGGC---AGCG---CGAGCGA----GGCCAGGTTGCACACGG 4683 Query 221730 CCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGG 221789 |||||||||| || ||||| | || ||| || || ||||| ||| ||||| Sbjct 4682 CCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTGGATGG 4623 Query 221790 TCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGAC 221849 | || ||||| | || || ||||||| ||| ||||||||||| ||||| |||| Sbjct 4622 TGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTAGGGCG 4563 Query 221850 CGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCC 221909 ||| ||||| | ||| | | | || || | ||| || || |||| || | || Sbjct 4562 TGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTC-CTGGGCCT---TGACC 4507 Query 221910 TCTTGACTGCACCCTCGG----TCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCA 221965 | | || | | ||| || || || | || | || |||| | Sbjct 4506 AC---GCGGCGCGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTG 4450 Query 221966 CCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGT-GCTTGTT 222024 || ||| ||| |||||| || | | ||| || | || ||||| || Sbjct 4449 CCCCACGAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCCA 4390 Query 222025 GTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGT 222084 ||| | || | || |||||| ||||| || |||||||| | | |||||||| | || Sbjct 4389 GTC-TCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGC 4331 Query 222085 CCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTG 222144 || | ||||||| ||||| ||| ||| |||| || | || ||||| ||||| ||||| Sbjct 4330 GCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGCGTG 4271 Query 222145 CCACGGCTCCAGATAGACGGCCAGAGCGCC 222174 ||| ||||| || |||| ||| | ||| || Sbjct 4270 CCAGGGCTCAAGGTAGATGGCGAAAGCACC 4241 Score = 109 bits (120), Expect = 1e-18 Identities = 229/334 (69%), Gaps = 8/334 (2%) Strand=Plus/Minus Query 222310 GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCC 222369 |||||| || ||||| || ||||| | |||||| |||||| ||||| |||||| Sbjct 4005 GCCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCC 3946 Query 222370 CTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGA 222429 ||| || ||||||||||| | | | ||||| || || ||||||| ||| | | || Sbjct 3945 CTCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGT 3886 Query 222430 ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT-AGACATCAGATCGT 222488 | |||||| || ||||| || | ||||| || ||| ||| || |||| || |||| Sbjct 3885 GCCGGCGTTGAAGAGCGTCGGGGTAGCGTGGGTGAAG-AGCTGCTGCGACAAGAGGTCGT 3827 Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACA 222548 | ||||| | || || |||||||||| ||| | ||||| | |||| || Sbjct 3826 AGGTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCA 3767 Query 222549 TGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCA 222605 ||| |||||| | ||| || | | || | || | || || ||||| || || | Sbjct 3766 TGTGCTGGGGTCGCTCGAC-GATCTTGCCGTCGACCCTGA-AG-AGGTAGGAGCGCTCGA 3710 Query 222606 GAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTC 222639 | |||||||| ||||||||| || || ||||| Sbjct 3709 GGGTCTTGAAGCCAAAGTAGGTGTAGTTGAAGTC 3676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928061563232960