Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_024365.1 Length=51090 Score E Sequences producing significant alignments: (Bits) Value seq34795 84.2 7e-12 >seq34795 Length=6479 Score = 84.2 bits (92), Expect = 7e-12 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 22843 GTTTGGCTTGTGCCAGATGATGTCCTGCCGGAGATACCAGCCGTCGTCCTGCAGCGCGAA 22902 ||| |||||||||||||||||||| ||| || ||||| |||||| | || || ||||| Sbjct 2414 GTTGGGCTTGTGCCAGATGATGTCGGACCGCAGGTACCACCCGTCGGCTTGAAGGGCGAA 2473 Query 22903 GGCCAGGCGCCAGGGCATGCCCATCAAGTCTTTCGGCTT 22941 ||||| | ||| |||| || || | |||||| ||||| Sbjct 2474 GGCCACCCTCCACGGCAGACCTATGAGGTCTTTGGGCTT 2512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163235531159016