Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq63528 107 2e-18 seq64861 104 2e-17 seq63448 104 2e-17 seq38151 104 2e-17 seq67000 102 7e-17 seq64025 98.7 8e-16 seq43205 98.7 8e-16 seq37491 98.7 8e-16 seq65762 96.9 3e-15 seq47019 95.1 1e-14 seq33364 95.1 1e-14 seq61750 89.7 4e-13 seq33763 89.7 4e-13 seq54486 86.0 5e-12 seq50178 86.0 5e-12 >seq63528 Length=6792 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | |||| |||| |||||||| || ||| Sbjct 3005 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTGCCG 2946 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || || || || | ||||| || || |||||| | || Sbjct 2945 GCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 2886 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | ||||| || || || || | ||||| ||||| || Sbjct 2885 ACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTC 2826 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 2825 TTCACGAAGATTTGCAT 2809 >seq64861 Length=3609 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 ||||| ||||||| || | || | || | || || || || || || ||||||||| Sbjct 671 TTGCCACCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 730 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | | || |||| |||||||| ||||| ||| | ||||||||||| |||||||| Sbjct 731 GCCAGGGTACGGCCGTCCTCGAGCTGCTTACCCGCGAAGATGAGACGCTGCTGATCCGGG 790 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||||| || || |||||| | |||| | | || | || || | | || Sbjct 791 GGGATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTATCGCTCGACTCG 850 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || | ||||| ||||| || || || ||||| ||||| Sbjct 851 ACCTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 900 >seq63448 Length=5210 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 ||||| ||||| | || | || | || | ||| || || || || || ||||||||| Sbjct 4209 TTGCCACCGCGGAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCG 4150 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | |||| |||| || ||||| || |||||| | ||||| ||||| || || || Sbjct 4149 GCCAGGGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGA 4090 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||||| || || |||||| | |||| | | || | |||||| | | || Sbjct 4089 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATAGTGTCCGAGCTCTCG 4030 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || | ||||||||||| || || || ||||| ||||| Sbjct 4029 ACCTCGAGGGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCAT 3980 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | | || |||| |||||||| ||||| Sbjct 3720 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTACCC 3661 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | ||||| || || |||||| | ||| Sbjct 3660 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 3601 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || || || || | ||||| || || || Sbjct 3600 ACGTTCTCGATCGTGTCGCTGGACTCTACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 3541 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 3540 TTCACGAAGATCTGCAT 3524 >seq38151 Length=7651 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||||||| || | |||| |||| |||||||| ||||| Sbjct 279 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCC 220 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | ||||| || || |||||| | ||| Sbjct 219 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 160 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || || || || || | || ||||| || || Sbjct 159 ACGTTCTCGATCGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTACCCGTGAGGGTC 100 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 99 TTGACGAAGATCTGCAT 83 >seq67000 Length=10850 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 ||||| ||||||| || | || | || | || || || || || || ||||||||| Sbjct 681 TTGCCACCGCGCAGACGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 740 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 | | || |||| |||||||| || || ||| | ||||||||||| || ||||| Sbjct 741 GCGAGCGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGG 800 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | |||||| || || |||||| | |||| | | || | ||||| ||| || Sbjct 801 GGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCG 860 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || || | ||||| ||||| || || || ||||| |||||| Sbjct 861 ACCTCGAGGGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATA 911 >seq64025 Length=5555 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | || |||| |||||||| || || Sbjct 1515 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGTGTACGGCCGTCCTCGAGCTGCTTGCCC 1574 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| ||||| || || | ||||| || || |||||| | ||| Sbjct 1575 GCGAAGATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTC 1634 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || || || || | ||||| ||||| || Sbjct 1635 ACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTAATGGTCTTGCCGGTCAGGGTC 1694 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 1695 TTCACGAAGATTTGCAT 1711 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| || |||| |||| |||||||| ||||| Sbjct 1059 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGGCCGTCCTCGAGCTGCTTACCC 1118 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | || || || || |||||| | || Sbjct 1119 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTG 1178 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || || || || |||| || ||||| || || Sbjct 1179 ACGTTCTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTC 1238 Query 27231 TTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 1239 TTGACGAAGATCTGCATA 1256 >seq43205 Length=799 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||||||| || | | || |||| |||||||| || || Sbjct 5 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCC 64 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| ||||| ||||| || || | ||||| || || |||||| | || Sbjct 65 GCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 124 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | ||||| || || || || | ||||| || || || Sbjct 125 ACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTC 184 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 185 TTCACGAAGATTTGCAT 201 >seq37491 Length=1671 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | |||| |||| |||||||| || || Sbjct 407 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCC 466 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| ||||| || || | ||||| || || ||||| | ||| Sbjct 467 GCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTTTGCTTC 526 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || || || || | ||||| || || || Sbjct 527 ACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTC 586 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 587 TTCACGAAGATCTGCAT 603 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||||||| || | | || |||| |||||||| || || Sbjct 179 GTAGATTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCA 238 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || || || || | ||||| || || ||||| | ||| Sbjct 239 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTTTGCTTC 298 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || || || || || | ||||| |||||||| Sbjct 299 ACGTTCTCGATTGTGTCCGAGCTCTCGACCTCGAGGGTAATGGTCTTGCCGGTCAGAGTC 358 Query 27231 TTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 359 TTGACGAAGATCTGCATA 376 >seq65762 Length=1559 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||||||| | | |||| |||| |||||||| ||||| Sbjct 638 CGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACC 697 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 || | ||||||||||| || || || || | || || || || |||||| | || Sbjct 698 AGCAAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTT 757 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | ||||| | | || || || || || || | ||||| ||||| || Sbjct 758 CACGTTCTCGATGGTGTCCGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGT 817 Query 27230 TTTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 818 CTTCACGAAGATTTGCAT 835 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||||| || | || | || | || || || || || || ||||||||| Sbjct 379 TGCCGCCGCGCAGACGAAGAACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 438 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | |||| |||| |||||||| || || ||| | ||||||||||| || || || | Sbjct 439 CCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAG 498 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || ||||| |||||| | || | | | || | ||||| | | || | Sbjct 499 GGATGCCTTCCTTATCCTGGATCTTCTGCTTTACGTTCTCGATCGTGTCCGAGCTCTCGA 558 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || || | ||||| || || || || || ||||| |||||| Sbjct 559 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 608 >seq47019 Length=2080 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| | | |||| |||| |||||||| || || Sbjct 559 GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 618 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| ||||| ||||| || || | ||||| ||||| |||||| | ||| Sbjct 619 GCGAAGATGAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTATCCTGGATCTTCTGCTTC 678 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || || || || || | ||||| || || || Sbjct 679 ACGTTCTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTC 738 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 739 TTCACGAAGATTTGCAT 755 >seq33364 Length=844 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || |||| |||| |||||||| || || Sbjct 236 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCA 295 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| ||||| || || | ||||| || || |||||| | ||| Sbjct 296 GCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 355 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || ||| || || || || || || | ||||| || || || Sbjct 356 ACGTTCTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 415 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 416 TTCACGAAGATCTGCAT 432 >seq61750 Length=9220 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | | || |||| |||||||| ||||| Sbjct 3997 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCC 4056 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || || || || | || || || || ||||| | ||| Sbjct 4057 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCTTTTGCTTC 4116 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || || || || | ||||| || || || Sbjct 4117 ACGTTCTCGATGGTGTCGCTGGACTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 4176 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 4177 TTCACGAAGATCTGCAT 4193 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| || |||| |||| |||||||| ||||| Sbjct 3541 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGGCCGTCCTCGAGCTGCTTACCC 3600 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | || || || || |||||| | || Sbjct 3601 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTG 3660 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | ||||| || || || || | || ||||| || || Sbjct 3661 ACGTTCTCGATCGTGTCGGAGCTCTCAACCTCGAGGGTGATCGTCTTACCCGTGAGCGTC 3720 Query 27231 TTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 3721 TTGACGAAGATCTGCATA 3738 >seq33763 Length=823 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 27069 TTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGT 27128 ||||||||| || | | || |||| |||||||| || || ||| | ||||||||||| Sbjct 2 TTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGC 61 Query 27129 TGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCT 27188 ||||| || || | |||||| || || |||||| | || | | | || | ||||| Sbjct 62 TGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTTACGTTCTCGATCGTGTCG 121 Query 27189 GTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | | || || || || || |||| || ||||| || || || || ||||| ||||| Sbjct 122 GACGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 180 >seq54486 Length=978 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||||||| || | |||| |||| |||||||| || || Sbjct 822 CGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 881 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | ||||||||||| ||||| ||||| | || || || || |||||| | || Sbjct 882 GGCGAAGATGAGACGCTGCTGATCGGGCGGGATGCCTTCCTTGTCCTGGATCTTCTGCTT 941 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGA 27206 || | | || | ||||| ||| || || || ||| Sbjct 942 CACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGA 978 >seq50178 Length=5618 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 27063 TGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGA 27122 || || ||| ||||| | | |||| |||| ||||||| ||||| ||| | |||||| Sbjct 1330 TGGATGTTGCAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTCCTTACCCGCGAAGATGAGA 1389 Query 27123 CGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACA 27182 ||||| ||||| | || | |||||| || || || ||| | |||| | | || | Sbjct 1390 CGCTGCTGATCGGTAGGAATACCCTCCTTGTCCTGGACCTTTTGCTTCACGCTCTCGATG 1449 Query 27183 GTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATT 27242 || || ||| ||| || || || || || | |||| || | ||| ||||||||||| Sbjct 1450 GTATCGCTGGATTCGACCTCGAGGGTGATGGTCTTGCAGGTGATAGTCTTCACAAAGATC 1509 Query 27243 TGCAT 27247 ||||| Sbjct 1510 TGCAT 1514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424585037394408