Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq58068 132 6e-26 seq54405 132 6e-26 seq54404 132 6e-26 >seq58068 Length=5899 Score = 132 bits (146), Expect = 6e-26 Identities = 691/1090 (63%), Gaps = 22/1090 (2%) Strand=Plus/Plus Query 110627 GACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCA 110686 |||||||| || || || ||| || | ||||||| |||||| | | || || Sbjct 3868 GACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGAAGGTGCTCGTTGACGACGGTGAAGTCG 3927 Query 110687 CCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTA 110746 || |||||| | | | ||||||||| || ||||| || |||||||| || || || Sbjct 3928 CCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTGTAGGGCTCAAAGCACTCGTTGTTG 3987 Query 110747 CCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGA 110806 |||| ||| || | ||| ||||| || ||||| || |||| | || ||| || ||| Sbjct 3988 CCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGCGCCACGAGGAGCGAGTTGCGCAGA 4047 Query 110807 CCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCT 110866 || | || |||| | ||| ||||||| | || | | | | Sbjct 4048 CCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAGTCCCACCTGTCCGACGGCACGACG 4107 Query 110867 TCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAG 110926 |||| | ||| ||| ||| || | ||||||||| || ||||| |||| | ||| Sbjct 4108 CCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCGGGCGAGCCCTCGTAGGTCTGGTAG 4167 Query 110927 GAACCTTGGGCTTCAGCCAATTCACAGCTCG---CCTCCAGGGATGCGTGATACATGGTT 110983 | || | | | | || | || | ||| | |||||| |||| || ||||| Sbjct 4168 GTGCCCTCGACCTGCGCGAGCTC---GTTCGAGGCGACCAGGGCGGCGTAGTAGATGGTC 4224 Query 110984 TCAAAGATACGAGCA-TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA 111042 || ||||| | || || | ||| ||| || || || | | || ||| | Sbjct 4225 TCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGGCGCAGGAT 4283 Query 111043 AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA 111102 || || || || || || || || || || | || || || ||||| ||||| || || Sbjct 4284 CATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCCGATGGGCCTGTGGCGCATGTTCGA 4343 Query 111103 CTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 111159 || || || ||| ||||| || | || |||| || || ||| || || || Sbjct 4344 GTTGCGGGC---CTCGGGCACGGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTT 4400 Query 111160 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 111219 ||| || | ||| || || || || || | | ||||| || || | | || Sbjct 4401 GGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTGGTCAAACTCGCC-GT-TGGTGAT- 4457 Query 111220 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 111279 || |||| || || |||| || |||| ||||| || ||| ||| || || Sbjct 4458 GA---ACTTGGGCAGCGCGAGCGAGGCCAGGTTGCACACGGCCACCTCGTCGGGCGACGT 4514 Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339 ||||| | | || || || | ||| || || || || || | | || ||||| Sbjct 4515 GTACTGGACGACCTCCGTGCACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGTT 4574 Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399 ||| |||||| || |||||||| |||||||||||||| || ||||| |||| || Sbjct 4575 GGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCGA 4634 Query 111400 TTTGAGAATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC 111459 | ||| || || ||| | || ||| || | | | || || |||||| Sbjct 4635 CTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGACCACGCGGCGCGCGCGGCCCTCCTG 4694 Query 111460 CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC 111519 |||||| ||| | || ||||||| ||| || |||| | || || || || Sbjct 4695 CTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTGCCCCACGAGTCGAACAGGCCGGGGGC 4754 Query 111520 CTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTC 111579 || || || || || || ||||| | || || ||| || ||||||||||| ||||| Sbjct 4755 CTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCCAGTCTCCACGCGCTTCATGAACAGGTC 4814 Query 111580 TGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAG 111639 |||||||||||| | |||||||| | || ||| || | || ||||| Sbjct 4815 GGGAATCCACAGGCCGTAGAAGAGATCGCGGGCGCGGTTCTCCTCCTTGCCGTGGTT-CT 4873 Query 111640 TCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 111698 || | | || ||||| || | ||| ||||||||||| |||||||| |||| |||| || Sbjct 4874 TCTTCAGGTCGAGGAAGTCAAAGATGTCCGCGTGCCAGGGCTCAAGGTAGATGGCGAAAG 4933 Query 111699 ATCCCTTTCG 111708 ||||| || Sbjct 4934 CACCCTTGCG 4943 Score = 105 bits (116), Expect = 8e-18 Identities = 214/316 (68%), Gaps = 4/316 (1%) Strand=Plus/Plus Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895 || || || || ||| |||| ||||| | || |||| | | || || | ||||| || Sbjct 5174 CCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 5233 Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955 | ||| ||||||||||| ||| || |||||||| |||| |||||| | || || Sbjct 5234 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTG 5293 Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTAT 112015 || || |||||||| || || || ||||| |||| | || |||| |||||| Sbjct 5294 CCGGCGTTGAAGAGCGTCGGGGTAGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 5353 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 ||||| | || | |||| ||| ||| | ||||| || || ||||||| |||| Sbjct 5354 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATG 5413 Query 112076 TACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA--TAGCTCTTCTCAAGGG 112133 | ||| || || | || |||| |||| || |||||| ||| ||| |||| Sbjct 5414 TGCTGGGGTCGCTCGACGATCTTGCCGTCGACCC--TGAAGAGGTAGGAGCGCTCGAGGG 5471 Query 112134 TTTTGAGACCAAAGTA 112149 | |||| |||||||| Sbjct 5472 TCTTGAAGCCAAAGTA 5487 >seq54405 Length=5848 Score = 132 bits (146), Expect = 6e-26 Identities = 691/1090 (63%), Gaps = 22/1090 (2%) Strand=Plus/Minus Query 110627 GACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCA 110686 |||||||| || || || ||| || | ||||||| |||||| | | || || Sbjct 5400 GACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGAAGGTGCTCGTTGACGACGGTGAAGTCG 5341 Query 110687 CCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTA 110746 || |||||| | | | ||||||||| || ||||| || |||||||| || || || Sbjct 5340 CCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTGTAGGGCTCAAAGCACTCGTTGTTG 5281 Query 110747 CCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGA 110806 |||| ||| || | ||| ||||| || ||||| || |||| | || ||| || ||| Sbjct 5280 CCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGCGCCACGAGGAGCGAGTTGCGCAGA 5221 Query 110807 CCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCT 110866 || | || |||| | ||| ||||||| | || | | | | Sbjct 5220 CCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAGTCCCACCTGTCCGACGGCACGACG 5161 Query 110867 TCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAG 110926 |||| | ||| ||| ||| || | ||||||||| || ||||| |||| | ||| Sbjct 5160 CCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCGGGCGAGCCCTCGTAGGTCTGGTAG 5101 Query 110927 GAACCTTGGGCTTCAGCCAATTCACAGCTCG---CCTCCAGGGATGCGTGATACATGGTT 110983 | || | | | | || | || | ||| | |||||| |||| || ||||| Sbjct 5100 GTGCCCTCGACCTGCGCGAGCTC---GTTCGAGGCGACCAGGGCGGCGTAGTAGATGGTC 5044 Query 110984 TCAAAGATACGAGCA-TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA 111042 || ||||| | || || | ||| ||| || || || | | || ||| | Sbjct 5043 TCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGGCGCAGGAT 4985 Query 111043 AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA 111102 || || || || || || || || || || | || || || ||||| ||||| || || Sbjct 4984 CATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCCGATGGGCCTGTGGCGCATGTTCGA 4925 Query 111103 CTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 111159 || || || ||| ||||| || | || |||| || || ||| || || || Sbjct 4924 GTTGCGGGC---CTCGGGCACGGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTT 4868 Query 111160 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 111219 ||| || | ||| || || || || || | | ||||| || || | | || Sbjct 4867 GGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTGGTCAAACTCGCC-GT-TGGTGAT- 4811 Query 111220 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 111279 || |||| || || |||| || |||| ||||| || ||| ||| || || Sbjct 4810 GA---ACTTGGGCAGCGCGAGCGAGGCCAGGTTGCACACGGCCACCTCGTCGGGCGACGT 4754 Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339 ||||| | | || || || | ||| || || || || || | | || ||||| Sbjct 4753 GTACTGGACGACCTCCGTGCACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGTT 4694 Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399 ||| |||||| || |||||||| |||||||||||||| || ||||| |||| || Sbjct 4693 GGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCGA 4634 Query 111400 TTTGAGAATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC 111459 | ||| || || ||| | || ||| || | | | || || |||||| Sbjct 4633 CTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGACCACGCGGCGCGCGCGGCCCTCCTG 4574 Query 111460 CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC 111519 |||||| ||| | || ||||||| ||| || |||| | || || || || Sbjct 4573 CTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTGCCCCACGAGTCGAACAGGCCGGGGGC 4514 Query 111520 CTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTC 111579 || || || || || || ||||| | || || ||| || ||||||||||| ||||| Sbjct 4513 CTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCCAGTCTCCACGCGCTTCATGAACAGGTC 4454 Query 111580 TGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAG 111639 |||||||||||| | |||||||| | || ||| || | || ||||| Sbjct 4453 GGGAATCCACAGGCCGTAGAAGAGATCGCGGGCGCGGTTCTCCTCCTTGCCGTGGTT-CT 4395 Query 111640 TCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 111698 || | | || ||||| || | ||| ||||||||||| |||||||| |||| |||| || Sbjct 4394 TCTTCAGGTCGAGGAAGTCAAAGATGTCCGCGTGCCAGGGCTCAAGGTAGATGGCGAAAG 4335 Query 111699 ATCCCTTTCG 111708 ||||| || Sbjct 4334 CACCCTTGCG 4325 Score = 105 bits (116), Expect = 8e-18 Identities = 214/316 (68%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895 || || || || ||| |||| ||||| | || |||| | | || || | ||||| || Sbjct 4094 CCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 4035 Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955 | ||| ||||||||||| ||| || |||||||| |||| |||||| | || || Sbjct 4034 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTG 3975 Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTAT 112015 || || |||||||| || || || ||||| |||| | || |||| |||||| Sbjct 3974 CCGGCGTTGAAGAGCGTCGGGGTAGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 3915 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 ||||| | || | |||| ||| ||| | ||||| || || ||||||| |||| Sbjct 3914 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATG 3855 Query 112076 TACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA--TAGCTCTTCTCAAGGG 112133 | ||| || || | || |||| |||| || |||||| ||| ||| |||| Sbjct 3854 TGCTGGGGTCGCTCGACGATCTTGCCGTCGACCC--TGAAGAGGTAGGAGCGCTCGAGGG 3797 Query 112134 TTTTGAGACCAAAGTA 112149 | |||| |||||||| Sbjct 3796 TCTTGAAGCCAAAGTA 3781 >seq54404 Length=5758 Score = 132 bits (146), Expect = 6e-26 Identities = 691/1090 (63%), Gaps = 22/1090 (2%) Strand=Plus/Minus Query 110627 GACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCA 110686 |||||||| || || || ||| || | ||||||| |||||| | | || || Sbjct 5310 GACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGAAGGTGCTCGTTGACGACGGTGAAGTCG 5251 Query 110687 CCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTA 110746 || |||||| | | | ||||||||| || ||||| || |||||||| || || || Sbjct 5250 CCGGCGAGGATGCGGCGGGTGTAGATGTTGGTCGTGTAGGGCTCAAAGCACTCGTTGTTG 5191 Query 110747 CCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGA 110806 |||| ||| || | ||| ||||| || ||||| || |||| | || ||| || ||| Sbjct 5190 CCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGCGCCACGAGGAGCGAGTTGCGCAGA 5131 Query 110807 CCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCT 110866 || | || |||| | ||| ||||||| | || | | | | Sbjct 5130 CCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAGTCCCACCTGTCCGACGGCACGACG 5071 Query 110867 TCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAG 110926 |||| | ||| ||| ||| || | ||||||||| || ||||| |||| | ||| Sbjct 5070 CCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCGGGCGAGCCCTCGTAGGTCTGGTAG 5011 Query 110927 GAACCTTGGGCTTCAGCCAATTCACAGCTCG---CCTCCAGGGATGCGTGATACATGGTT 110983 | || | | | | || | || | ||| | |||||| |||| || ||||| Sbjct 5010 GTGCCCTCGACCTGCGCGAGCTC---GTTCGAGGCGACCAGGGCGGCGTAGTAGATGGTC 4954 Query 110984 TCAAAGATACGAGCA-TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA 111042 || ||||| | || || | ||| ||| || || || | | || ||| | Sbjct 4953 TCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGGCGCAGGAT 4895 Query 111043 AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA 111102 || || || || || || || || || || | || || || ||||| ||||| || || Sbjct 4894 CATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCCGATGGGCCTGTGGCGCATGTTCGA 4835 Query 111103 CTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 111159 || || || ||| ||||| || | || |||| || || ||| || || || Sbjct 4834 GTTGCGGGC---CTCGGGCACGGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTCTT 4778 Query 111160 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 111219 ||| || | ||| || || || || || | | ||||| || || | | || Sbjct 4777 GGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTGGTCAAACTCGCC-GT-TGGTGAT- 4721 Query 111220 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 111279 || |||| || || |||| || |||| ||||| || ||| ||| || || Sbjct 4720 GA---ACTTGGGCAGCGCGAGCGAGGCCAGGTTGCACACGGCCACCTCGTCGGGCGACGT 4664 Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339 ||||| | | || || || | ||| || || || || || | | || ||||| Sbjct 4663 GTACTGGACGACCTCCGTGCACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGTT 4604 Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399 ||| |||||| || |||||||| |||||||||||||| || ||||| |||| || Sbjct 4603 GGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCGA 4544 Query 111400 TTTGAGAATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC 111459 | ||| || || ||| | || ||| || | | | || || |||||| Sbjct 4543 CTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGACCACGCGGCGCGCGCGGCCCTCCTG 4484 Query 111460 CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC 111519 |||||| ||| | || ||||||| ||| || |||| | || || || || Sbjct 4483 CTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTGCCCCACGAGTCGAACAGGCCGGGGGC 4424 Query 111520 CTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTC 111579 || || || || || || ||||| | || || ||| || ||||||||||| ||||| Sbjct 4423 CTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCCAGTCTCCACGCGCTTCATGAACAGGTC 4364 Query 111580 TGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAG 111639 |||||||||||| | |||||||| | || ||| || | || ||||| Sbjct 4363 GGGAATCCACAGGCCGTAGAAGAGATCGCGGGCGCGGTTCTCCTCCTTGCCGTGGTT-CT 4305 Query 111640 TCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 111698 || | | || ||||| || | ||| ||||||||||| |||||||| |||| |||| || Sbjct 4304 TCTTCAGGTCGAGGAAGTCAAAGATGTCCGCGTGCCAGGGCTCAAGGTAGATGGCGAAAG 4245 Query 111699 ATCCCTTTCG 111708 ||||| || Sbjct 4244 CACCCTTGCG 4235 Score = 105 bits (116), Expect = 8e-18 Identities = 214/316 (68%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895 || || || || ||| |||| ||||| | || |||| | | || || | ||||| || Sbjct 4004 CCGATGCCGCCGGCCGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 3945 Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955 | ||| ||||||||||| ||| || |||||||| |||| |||||| | || || Sbjct 3944 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTG 3885 Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTAT 112015 || || |||||||| || || || ||||| |||| | || |||| |||||| Sbjct 3884 CCGGCGTTGAAGAGCGTCGGGGTAGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 3825 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 ||||| | || | |||| ||| ||| | ||||| || || ||||||| |||| Sbjct 3824 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATG 3765 Query 112076 TACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA--TAGCTCTTCTCAAGGG 112133 | ||| || || | || |||| |||| || |||||| ||| ||| |||| Sbjct 3764 TGCTGGGGTCGCTCGACGATCTTGCCGTCGACCC--TGAAGAGGTAGGAGCGCTCGAGGG 3707 Query 112134 TTTTGAGACCAAAGTA 112149 | |||| |||||||| Sbjct 3706 TCTTGAAGCCAAAGTA 3691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627502419866400