Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq58068 212 8e-50 seq54405 212 8e-50 seq54404 212 8e-50 seq50985 109 7e-19 seq50789 109 7e-19 seq50610 109 7e-19 seq50609 109 7e-19 >seq58068 Length=5899 Score = 212 bits (234), Expect = 8e-50 Identities = 878/1365 (64%), Gaps = 44/1365 (3%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 3604 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 3663 Query 117897 AACTTGGA----GAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGAT 117952 | ||||| ||||| | | | |||| ||| ||| | ||| || ||||| Sbjct 3664 AGCTTGGCAAACGAGGGCTCGCC----CATGTAGACGTTGAGCGACTGGCTCTGGTCGAT 3719 Query 117953 GAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGT 118012 | || ||||| || ||||| || || | | | | || |||||||| || Sbjct 3720 GTAGGCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGT 3779 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072 | |||| || ||||| || || || ||||| ||| |||| |||| || || Sbjct 3780 CTTGTACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTG 3839 Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132 | ||| | | ||| | | |||||||| || || | ||| || || Sbjct 3840 CGAGACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAG 3899 Query 118133 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGT 118192 || |||| ||||| || || || || |||||| |||| | ||||| ||||| Sbjct 3900 AAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGT 3959 Query 118193 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 118252 |||||| |||||||||||||| ||||| |||| ||| || | || ||||| |||||||| Sbjct 3960 CGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCAT 4019 Query 118253 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTC 118312 ||| |||| ||| || ||| || ||||| | | ||| | ||| | | | Sbjct 4020 GGGCGCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGC 4079 Query 118313 CCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 118372 |||||| | || | | | | | ||| | || |||||| | || | ||| Sbjct 4080 CCAGTCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGA 4139 Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCT 118429 ||| ||||| ||||| | |||| || | |||||| |||| ||| | ||| ||| Sbjct 4140 CGCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG-- 4197 Query 118430 CGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAAT-GCGAGCATTCATTGCCTTGGCCT 118488 || | ||||| |||| || || || || || || ||| | || | | ||||| Sbjct 4198 -GCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGATGGCGCG-GTTGAGCTCGCGGGCCT 4255 Query 118489 CGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 118548 ||||| || ||| | | || | || || || || || || || || || |||| Sbjct 4256 CGTCGCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGA 4315 Query 118549 GGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAAT 118605 ||| || || | || | ||| || || || || || ||| |||||| || | | Sbjct 4316 TGCCGATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGGGCACGGGGTAGTAGT 4372 Query 118606 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 118665 | | ||||| ||| | || || || |||||||| ||||| || || || ||||| | Sbjct 4373 TGATGTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCT 4432 Query 118666 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 118725 || || ||||| || | | ||| |||| || || |||| || ||||| | Sbjct 4433 GGTGGTC-AAACT-CG----CCGTTGGTGATGAACTTGGGCAGCGCGAGCGAGGCCAGGT 4486 Query 118726 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAAC 118785 | ||||| | ||| || ||||||| | | |||||||||| ||| || Sbjct 4487 TGCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACG 4546 Query 118786 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 118845 || |||||||| | || || || || ||||| ||| || || |||||||| |||| Sbjct 4547 ACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCA 4606 Query 118846 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA---CATCGGCAG 118902 |||| ||||| || ||||| | || |||| ||| || || ||| | | | ||| Sbjct 4607 TGTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGC-- 4664 Query 118903 CTGGCACA-GTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAAC 118961 || | || | |||| || || ||||| | |||||| ||| | || ||| Sbjct 4665 CTTGACCACGCGGCG--CGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAAC 4722 Query 118962 T-CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTG 119020 | ||| ||||| | || | || || || |||| | ||||| ||||| ||||| | Sbjct 4723 TCCTTGCCCCAC-GAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTC 4781 Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGAT 119079 || || ||| || ||||||||||| ||||| || ||||| || |||| ||||||||| Sbjct 4782 GCCGCCAGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAG-GCCGTAGAAGAGAT 4840 Query 119080 CCCGACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 119137 | || ||| | |||| || | || || || || || | ||||| | ||| Sbjct 4841 CGCG--GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGAT 4898 Query 119138 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182 ||||||||||| || || ||||| | |||| | ||||| || Sbjct 4899 GTCCGCGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCCTTGCG 4943 Score = 138 bits (152), Expect = 1e-27 Identities = 283/419 (68%), Gaps = 4/419 (1%) Strand=Plus/Plus Query 119208 GCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCC 119267 |||||| |||| | || || ||||| || |||| ||| | ||| ||| || || || Sbjct 5072 GCAGTGTCGTTGTAGACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCG 5131 Query 119268 CGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCC 119325 || || ||||| || ||| | || ||| | | || || || || ||| Sbjct 5132 CGGATGTACGAG--TTGGAGGCGCGGATGCGGTGCGCGGCGAGGCCGATGCCGCCGGCCG 5189 Query 119326 ACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCT 119385 |||| ||||| | ||||||| | |||| || ||||||| || ||||||||||| ||| Sbjct 5190 ACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCCTCGATCGAGTCCTCCT 5249 Query 119386 TATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAG 119445 | | | || |||||||| ||||| || || | || || || ||||||||||| | Sbjct 5250 TCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTGCCGGCGTTGAAGAGCG 5309 Query 119446 TTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGG 119505 | || || |||||| |||| | || |||| |||||||||||| | ||||||| Sbjct 5310 TCGGGGTAGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCGG 5369 Query 119506 GAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCA 119565 | |||| ||| ||| | |||||| | || ||||| | ||||| |||||| || | Sbjct 5370 GGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATGTGCTGGGGTCGCTCGA 5429 Query 119566 TCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATAG 119624 | | || |||| ||| |||||| ||| | |||||||| ||||| ||| Sbjct 5430 CGATCTTGCCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTCTTGAAGCCAAAGTAG 5488 >seq54405 Length=5848 Score = 212 bits (234), Expect = 8e-50 Identities = 878/1365 (64%), Gaps = 44/1365 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 5664 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 5605 Query 117897 AACTTGGA----GAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGAT 117952 | ||||| ||||| | | | |||| ||| ||| | ||| || ||||| Sbjct 5604 AGCTTGGCAAACGAGGGCTCGCC----CATGTAGACGTTGAGCGACTGGCTCTGGTCGAT 5549 Query 117953 GAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGT 118012 | || ||||| || ||||| || || | | | | || |||||||| || Sbjct 5548 GTAGGCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGT 5489 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072 | |||| || ||||| || || || ||||| ||| |||| |||| || || Sbjct 5488 CTTGTACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTG 5429 Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132 | ||| | | ||| | | |||||||| || || | ||| || || Sbjct 5428 CGAGACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAG 5369 Query 118133 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGT 118192 || |||| ||||| || || || || |||||| |||| | ||||| ||||| Sbjct 5368 AAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGT 5309 Query 118193 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 118252 |||||| |||||||||||||| ||||| |||| ||| || | || ||||| |||||||| Sbjct 5308 CGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCAT 5249 Query 118253 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTC 118312 ||| |||| ||| || ||| || ||||| | | ||| | ||| | | | Sbjct 5248 GGGCGCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGC 5189 Query 118313 CCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 118372 |||||| | || | | | | | ||| | || |||||| | || | ||| Sbjct 5188 CCAGTCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGA 5129 Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCT 118429 ||| ||||| ||||| | |||| || | |||||| |||| ||| | ||| ||| Sbjct 5128 CGCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG-- 5071 Query 118430 CGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAAT-GCGAGCATTCATTGCCTTGGCCT 118488 || | ||||| |||| || || || || || || ||| | || | | ||||| Sbjct 5070 -GCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGATGGCGCG-GTTGAGCTCGCGGGCCT 5013 Query 118489 CGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 118548 ||||| || ||| | | || | || || || || || || || || || |||| Sbjct 5012 CGTCGCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGA 4953 Query 118549 GGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAAT 118605 ||| || || | || | ||| || || || || || ||| |||||| || | | Sbjct 4952 TGCCGATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGGGCACGGGGTAGTAGT 4896 Query 118606 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 118665 | | ||||| ||| | || || || |||||||| ||||| || || || ||||| | Sbjct 4895 TGATGTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCT 4836 Query 118666 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 118725 || || ||||| || | | ||| |||| || || |||| || ||||| | Sbjct 4835 GGTGGTC-AAACT-CG----CCGTTGGTGATGAACTTGGGCAGCGCGAGCGAGGCCAGGT 4782 Query 118726 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAAC 118785 | ||||| | ||| || ||||||| | | |||||||||| ||| || Sbjct 4781 TGCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACG 4722 Query 118786 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 118845 || |||||||| | || || || || ||||| ||| || || |||||||| |||| Sbjct 4721 ACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCA 4662 Query 118846 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA---CATCGGCAG 118902 |||| ||||| || ||||| | || |||| ||| || || ||| | | | ||| Sbjct 4661 TGTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGC-- 4604 Query 118903 CTGGCACA-GTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAAC 118961 || | || | |||| || || ||||| | |||||| ||| | || ||| Sbjct 4603 CTTGACCACGCGGCG--CGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAAC 4546 Query 118962 T-CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTG 119020 | ||| ||||| | || | || || || |||| | ||||| ||||| ||||| | Sbjct 4545 TCCTTGCCCCAC-GAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTC 4487 Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGAT 119079 || || ||| || ||||||||||| ||||| || ||||| || |||| ||||||||| Sbjct 4486 GCCGCCAGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAG-GCCGTAGAAGAGAT 4428 Query 119080 CCCGACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 119137 | || ||| | |||| || | || || || || || | ||||| | ||| Sbjct 4427 CGCG--GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGAT 4370 Query 119138 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182 ||||||||||| || || ||||| | |||| | ||||| || Sbjct 4369 GTCCGCGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCCTTGCG 4325 Score = 138 bits (152), Expect = 1e-27 Identities = 283/419 (68%), Gaps = 4/419 (1%) Strand=Plus/Minus Query 119208 GCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCC 119267 |||||| |||| | || || ||||| || |||| ||| | ||| ||| || || || Sbjct 4196 GCAGTGTCGTTGTAGACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCG 4137 Query 119268 CGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCC 119325 || || ||||| || ||| | || ||| | | || || || || ||| Sbjct 4136 CGGATGTACGAG--TTGGAGGCGCGGATGCGGTGCGCGGCGAGGCCGATGCCGCCGGCCG 4079 Query 119326 ACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCT 119385 |||| ||||| | ||||||| | |||| || ||||||| || ||||||||||| ||| Sbjct 4078 ACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCCTCGATCGAGTCCTCCT 4019 Query 119386 TATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAG 119445 | | | || |||||||| ||||| || || | || || || ||||||||||| | Sbjct 4018 TCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTGCCGGCGTTGAAGAGCG 3959 Query 119446 TTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGG 119505 | || || |||||| |||| | || |||| |||||||||||| | ||||||| Sbjct 3958 TCGGGGTAGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCGG 3899 Query 119506 GAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCA 119565 | |||| ||| ||| | |||||| | || ||||| | ||||| |||||| || | Sbjct 3898 GGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATGTGCTGGGGTCGCTCGA 3839 Query 119566 TCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATAG 119624 | | || |||| ||| |||||| ||| | |||||||| ||||| ||| Sbjct 3838 CGATCTTGCCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTCTTGAAGCCAAAGTAG 3780 >seq54404 Length=5758 Score = 212 bits (234), Expect = 8e-50 Identities = 878/1365 (64%), Gaps = 44/1365 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 5574 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 5515 Query 117897 AACTTGGA----GAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGAT 117952 | ||||| ||||| | | | |||| ||| ||| | ||| || ||||| Sbjct 5514 AGCTTGGCAAACGAGGGCTCGCC----CATGTAGACGTTGAGCGACTGGCTCTGGTCGAT 5459 Query 117953 GAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGT 118012 | || ||||| || ||||| || || | | | | || |||||||| || Sbjct 5458 GTAGGCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGT 5399 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072 | |||| || ||||| || || || ||||| ||| |||| |||| || || Sbjct 5398 CTTGTACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTG 5339 Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132 | ||| | | ||| | | |||||||| || || | ||| || || Sbjct 5338 CGAGACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAG 5279 Query 118133 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGT 118192 || |||| ||||| || || || || |||||| |||| | ||||| ||||| Sbjct 5278 AAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATGCGGCGGGTGTAGATGTTGGT 5219 Query 118193 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 118252 |||||| |||||||||||||| ||||| |||| ||| || | || ||||| |||||||| Sbjct 5218 CGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCAT 5159 Query 118253 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTC 118312 ||| |||| ||| || ||| || ||||| | | ||| | ||| | | | Sbjct 5158 GGGCGCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGC 5099 Query 118313 CCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 118372 |||||| | || | | | | | ||| | || |||||| | || | ||| Sbjct 5098 CCAGTCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGA 5039 Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCT 118429 ||| ||||| ||||| | |||| || | |||||| |||| ||| | ||| ||| Sbjct 5038 CGCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG-- 4981 Query 118430 CGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAAT-GCGAGCATTCATTGCCTTGGCCT 118488 || | ||||| |||| || || || || || || ||| | || | | ||||| Sbjct 4980 -GCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGATGGCGCG-GTTGAGCTCGCGGGCCT 4923 Query 118489 CGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 118548 ||||| || ||| | | || | || || || || || || || || || |||| Sbjct 4922 CGTCGCTCTCCCACGGGTGGCGCAGGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGA 4863 Query 118549 GGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAAT 118605 ||| || || | || | ||| || || || || || ||| |||||| || | | Sbjct 4862 TGCCGATGGGCCTGTGGCGCATGTTCGAGTTGCG---GGCCTCGGGCACGGGGTAGTAGT 4806 Query 118606 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 118665 | | ||||| ||| | || || || |||||||| ||||| || || || ||||| | Sbjct 4805 TGATGTCGATCACCTTGTTGAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCT 4746 Query 118666 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 118725 || || ||||| || | | ||| |||| || || |||| || ||||| | Sbjct 4745 GGTGGTC-AAACT-CG----CCGTTGGTGATGAACTTGGGCAGCGCGAGCGAGGCCAGGT 4692 Query 118726 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAAC 118785 | ||||| | ||| || ||||||| | | |||||||||| ||| || Sbjct 4691 TGCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACG 4632 Query 118786 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 118845 || |||||||| | || || || || ||||| ||| || || |||||||| |||| Sbjct 4631 ACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCA 4572 Query 118846 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA---CATCGGCAG 118902 |||| ||||| || ||||| | || |||| ||| || || ||| | | | ||| Sbjct 4571 TGTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGC-- 4514 Query 118903 CTGGCACA-GTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAAC 118961 || | || | |||| || || ||||| | |||||| ||| | || ||| Sbjct 4513 CTTGACCACGCGGCG--CGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAAC 4456 Query 118962 T-CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTG 119020 | ||| ||||| | || | || || || |||| | ||||| ||||| ||||| | Sbjct 4455 TCCTTGCCCCAC-GAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTC 4397 Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGAT 119079 || || ||| || ||||||||||| ||||| || ||||| || |||| ||||||||| Sbjct 4396 GCCGCCAGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAG-GCCGTAGAAGAGAT 4338 Query 119080 CCCGACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 119137 | || ||| | |||| || | || || || || || | ||||| | ||| Sbjct 4337 CGCG--GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGAT 4280 Query 119138 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182 ||||||||||| || || ||||| | |||| | ||||| || Sbjct 4279 GTCCGCGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCCTTGCG 4235 Score = 138 bits (152), Expect = 1e-27 Identities = 283/419 (68%), Gaps = 4/419 (1%) Strand=Plus/Minus Query 119208 GCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCC 119267 |||||| |||| | || || ||||| || |||| ||| | ||| ||| || || || Sbjct 4106 GCAGTGTCGTTGTAGACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCG 4047 Query 119268 CGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCC 119325 || || ||||| || ||| | || ||| | | || || || || ||| Sbjct 4046 CGGATGTACGAG--TTGGAGGCGCGGATGCGGTGCGCGGCGAGGCCGATGCCGCCGGCCG 3989 Query 119326 ACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCT 119385 |||| ||||| | ||||||| | |||| || ||||||| || ||||||||||| ||| Sbjct 3988 ACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCCTCGATCGAGTCCTCCT 3929 Query 119386 TATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAG 119445 | | | || |||||||| ||||| || || | || || || ||||||||||| | Sbjct 3928 TCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTGCCGGCGTTGAAGAGCG 3869 Query 119446 TTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGG 119505 | || || |||||| |||| | || |||| |||||||||||| | ||||||| Sbjct 3868 TCGGGGTAGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCGG 3809 Query 119506 GAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCA 119565 | |||| ||| ||| | |||||| | || ||||| | ||||| |||||| || | Sbjct 3808 GGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATGTGCTGGGGTCGCTCGA 3749 Query 119566 TCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATAG 119624 | | || |||| ||| |||||| ||| | |||||||| ||||| ||| Sbjct 3748 CGATCTTGCCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTCTTGAAGCCAAAGTAG 3690 >seq50985 Length=2480 Score = 109 bits (120), Expect = 7e-19 Identities = 280/420 (67%), Gaps = 15/420 (4%) Strand=Plus/Minus Query 129838 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGAT 129897 |||||| || || | |||| |||| ||||||| |||| |||| |||||| ||||| Sbjct 974 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 915 Query 129898 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCAC 129957 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 914 GAGGGCCACGGGGAGCGACTCAGTCACGAATTCCTTCTCAATCTCGACAGCCTCGAGGAT 855 Query 129958 GATGGCGTGAATGGTCTC--CGTGCCAGGTCTATT----GCGCAAAGTCTTGAAGAGTTC 130011 ||| || ||| | | || | ||| || | | ||| || | || ||| Sbjct 854 GATC---TGCTTGGGCACGTCGGTCGAGGGCTTGTTGACGAGCATGGTGTAGAGGAGG-- 800 Query 130012 CACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 130071 || ||| || || |||||| ||||| || ||| ||| | || || |||| || Sbjct 799 CA-GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAG 741 Query 130072 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAA 130131 || |||||||| || |||||||| | |||||| || | || || ||| |||||||| Sbjct 740 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAA 681 Query 130132 GATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG-AGCGGGA--CTTTGT 130188 ||| ||||| || ||||| | | ||||||||| || |||| || | || | Sbjct 680 GATGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTT 621 Query 130189 ATCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 | | ||||||||||||||| | ||||| |||| || | || ||||||| ||| || Sbjct 620 GTTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGC 561 >seq50789 Length=2477 Score = 109 bits (120), Expect = 7e-19 Identities = 280/420 (67%), Gaps = 15/420 (4%) Strand=Plus/Plus Query 129838 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGAT 129897 |||||| || || | |||| |||| ||||||| |||| |||| |||||| ||||| Sbjct 1504 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 1563 Query 129898 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCAC 129957 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 1564 GAGGGCCACGGGGAGCGACTCAGTCACGAATTCCTTCTCAATCTCGACAGCCTCGAGGAT 1623 Query 129958 GATGGCGTGAATGGTCTC--CGTGCCAGGTCTATT----GCGCAAAGTCTTGAAGAGTTC 130011 ||| || ||| | | || | ||| || | | ||| || | || ||| Sbjct 1624 GATC---TGCTTGGGCACGTCGGTCGAGGGCTTGTTGACGAGCATGGTGTAGAGGAGG-- 1678 Query 130012 CACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 130071 || ||| || || |||||| ||||| || ||| ||| | || || |||| || Sbjct 1679 CA-GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAG 1737 Query 130072 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAA 130131 || |||||||| || |||||||| | |||||| || | || || ||| |||||||| Sbjct 1738 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAA 1797 Query 130132 GATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG-AGCGGGA--CTTTGT 130188 ||| ||||| || ||||| | | ||||||||| || |||| || | || | Sbjct 1798 GATGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTT 1857 Query 130189 ATCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 | | ||||||||||||||| | ||||| |||| || | || ||||||| ||| || Sbjct 1858 GTTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGC 1917 >seq50610 Length=4059 Score = 109 bits (120), Expect = 7e-19 Identities = 280/420 (67%), Gaps = 15/420 (4%) Strand=Plus/Minus Query 129838 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGAT 129897 |||||| || || | |||| |||| ||||||| |||| |||| |||||| ||||| Sbjct 3883 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 3824 Query 129898 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCAC 129957 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 3823 GAGGGCCACGGGGAGCGACTCAGTCACGAATTCCTTCTCAATCTCGACAGCCTCGAGGAT 3764 Query 129958 GATGGCGTGAATGGTCTC--CGTGCCAGGTCTATT----GCGCAAAGTCTTGAAGAGTTC 130011 ||| || ||| | | || | ||| || | | ||| || | || ||| Sbjct 3763 GATC---TGCTTGGGCACGTCGGTCGAGGGCTTGTTGACGAGCATGGTGTAGAGGAGG-- 3709 Query 130012 CACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 130071 || ||| || || |||||| ||||| || ||| ||| | || || |||| || Sbjct 3708 CA-GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAG 3650 Query 130072 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAA 130131 || |||||||| || |||||||| | |||||| || | || || ||| |||||||| Sbjct 3649 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAA 3590 Query 130132 GATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG-AGCGGGA--CTTTGT 130188 ||| ||||| || ||||| | | ||||||||| || |||| || | || | Sbjct 3589 GATGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTT 3530 Query 130189 ATCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 | | ||||||||||||||| | ||||| |||| || | || ||||||| ||| || Sbjct 3529 GTTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGC 3470 >seq50609 Length=4102 Score = 109 bits (120), Expect = 7e-19 Identities = 280/420 (67%), Gaps = 15/420 (4%) Strand=Plus/Minus Query 129838 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGAT 129897 |||||| || || | |||| |||| ||||||| |||| |||| |||||| ||||| Sbjct 3926 GAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCATGCCGAT 3867 Query 129898 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCAC 129957 |||| ||||||| || | ||| |||||||||| || ||||| || | | Sbjct 3866 GAGGGCCACGGGGAGCGACTCAGTCACGAATTCCTTCTCAATCTCGACAGCCTCGAGGAT 3807 Query 129958 GATGGCGTGAATGGTCTC--CGTGCCAGGTCTATT----GCGCAAAGTCTTGAAGAGTTC 130011 ||| || ||| | | || | ||| || | | ||| || | || ||| Sbjct 3806 GATC---TGCTTGGGCACGTCGGTCGAGGGCTTGTTGACGAGCATGGTGTAGAGGAGG-- 3752 Query 130012 CACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 130071 || ||| || || |||||| ||||| || ||| ||| | || || |||| || Sbjct 3751 CA-GGCGAAGTCGCAGTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAG 3693 Query 130072 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAA 130131 || |||||||| || |||||||| | |||||| || | || || ||| |||||||| Sbjct 3692 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAA 3633 Query 130132 GATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG-AGCGGGA--CTTTGT 130188 ||| ||||| || ||||| | | ||||||||| || |||| || | || | Sbjct 3632 GATGCCCTCGACGGCGGCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACACCCTCCTT 3573 Query 130189 ATCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 | | ||||||||||||||| | ||||| |||| || | || ||||||| ||| || Sbjct 3572 GTTGATCCACTTCATCGCCCAGTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGC 3513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617913712248040