Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq63528 122 7e-23 seq43205 118 9e-22 seq64861 109 5e-19 seq64025 109 5e-19 seq63448 109 5e-19 seq67000 105 6e-18 seq63834 105 6e-18 seq61750 105 6e-18 seq47541 104 2e-17 seq33763 102 7e-17 seq33364 98.7 9e-16 seq65762 96.9 3e-15 seq61737 95.1 1e-14 seq38151 95.1 1e-14 seq37491 91.5 1e-13 seq20806 87.8 2e-12 seq54486 82.4 7e-11 seq50178 82.4 7e-11 seq24217 82.4 7e-11 >seq63528 Length=6792 Score = 122 bits (134), Expect = 7e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| | || || |||| || ||||| ||||| || || Sbjct 3000 CTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2941 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| ||||| |||| | Sbjct 2940 GATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 2881 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 2880 CTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 2821 Query 39273 AAAGATTTGCATCTT 39287 ||||||||||| || Sbjct 2820 GAAGATTTGCATGTT 2806 Score = 82.4 bits (90), Expect = 7e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 39112 TCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCG 39171 ||||| || || || |||| || ||||| ||||| || || || ||||||||||||||| Sbjct 3209 TCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCG 3150 Query 39172 GTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGAC 39231 | ||| | | ||| |||||| ||| ||||| || | || | | || ||| | Sbjct 3149 GGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGGAGCTC 3090 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || | ||||| | || || ||||| || || || ||||| ||||| Sbjct 3089 TCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 3037 >seq43205 Length=799 Score = 118 bits (130), Expect = 9e-22 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| |||||||| || Sbjct 10 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAA 69 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || |||||||| || | ||| | || ||| |||||| ||| ||||| |||| | Sbjct 70 GATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 129 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | ||||| | || || || || || || || Sbjct 130 CTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTCAC 189 Query 39273 AAAGATTTGCATCTT 39287 ||||||||||| || Sbjct 190 GAAGATTTGCATGTT 204 >seq64861 Length=3609 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 698 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 757 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || ||||| || || ||||||||||| || | ||| | || ||| |||||| ||| || Sbjct 758 TTACCCGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTT 817 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | |||||||||||||| || || | || || | || || ||| Sbjct 818 TGCTTCACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGGGTAATGGTCTTGCCGGTC 877 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || ||||| ||||| Sbjct 878 AGCGTCTTGACGAAGATCTGCAT 900 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || ||||| ||| || || || || || ||||| || || || | Sbjct 1919 GCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACC 1978 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| |||||||| || ||||| || || || ||||||||||| | ||| | || ||| || Sbjct 1979 GTCCTCAAGCTGCTTACCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTT 2038 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 ||| ||| || || || | || | | |||||||||||||| || || | || || Sbjct 2039 GTCTTGGATCTTTTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGAGTAAT 2098 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| || || || ||||| ||||| Sbjct 2099 CGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 2134 Score = 102 bits (112), Expect = 7e-17 Identities = 147/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1329 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 1388 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || ||||||||||||| || | || ||| |||||| ||| ||| Sbjct 1389 TTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 1448 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | ||| || ||| ||| || || | ||||| | || || Sbjct 1449 TGCTTCACGTTCTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATGGTCTTGCCG 1505 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || ||||| ||||| Sbjct 1506 GTCAGCGTCTTGACGAAGATCTGCAT 1531 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 2160 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 2219 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | || ||| |||||| || ||| Sbjct 2220 TTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTC 2279 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||||| ||||| || || | ||||| | || || || Sbjct 2280 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 2339 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 2340 AGGGTCTTCACGAAGATCTGCAT 2362 >seq64025 Length=5555 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| ||||| || |||| || ||||| Sbjct 1509 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGTGTACGGCCGTCCTCGAGCTGC 1568 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 |||||||| || || ||||||||||| || | ||| | || ||| |||||| ||| || Sbjct 1569 TTGCCCGCGAAGATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTT 1628 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||||| ||||| || || | || || | || || ||| Sbjct 1629 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGTAATGGTCTTGCCGGTC 1688 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||||||||| Sbjct 1689 AGGGTCTTCACGAAGATTTGCAT 1711 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || |||| || ||||| Sbjct 1281 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGGCCGTCCTCGAGCTGC 1340 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| || | || ||| |||||| ||| ||| Sbjct 1341 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 1400 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||| |||||| || || | |||||| | || ||||| Sbjct 1401 TGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTG 1460 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 1461 AGGGTCTTGACGAAGATCTGCAT 1483 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || |||| || ||||| Sbjct 1053 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGGCCGTCCTCGAGCTGC 1112 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || ||||| || || |||||||||||||| | ||| | || || |||||| ||| ||| Sbjct 1113 TTACCCGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTC 1172 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || |||| || | | ||| || ||| ||| || || | |||||| | || ||| Sbjct 1173 TGCTTGACGTTCTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATAGTCTTACCC 1229 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || ||||| ||||| Sbjct 1230 GTGAGGGTCTTGACGAAGATCTGCAT 1255 >seq63448 Length=5210 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 3726 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGC 3667 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || ||||| || || |||||||||||||| | ||| | || ||| |||||| ||| ||| Sbjct 3666 TTACCCGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 3607 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||| ||||| || || | ||||| | || || || Sbjct 3606 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCTACCTCGAGGGTGATGGTCTTGCCGGTG 3547 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 3546 AGGGTCTTCACGAAGATCTGCAT 3524 Score = 102 bits (112), Expect = 7e-17 Identities = 147/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| |||||||| Sbjct 4182 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCAAGCTGC 4123 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| || | || ||| |||||| ||| ||| Sbjct 4122 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 4063 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | || || ||| ||| || || | ||||| | || ||| Sbjct 4062 TGCTTCACGTTCTCGATAGTGTCCGAGCT---CTCGACCTCGAGGGTGATGGTCTTGCCC 4006 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || ||||| ||||| Sbjct 4005 GTCAGCGTCTTGACGAAGATCTGCAT 3980 >seq67000 Length=10850 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 708 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCGTCCTCGAGCTGC 767 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | | ||| |||||| ||| ||| Sbjct 768 TTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTC 827 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||| ||||| || || | || || | || || ||| Sbjct 828 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTAATCGTCTTGCCGGTC 887 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 888 AGGGTCTTGACGAAGATCTGCAT 910 >seq63834 Length=75625 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || || || || || || |||| |||||||| Sbjct 68740 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCAAGCTGC 68799 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || || || || || ||||||||||||| || | || || |||||| ||| ||| Sbjct 68800 TTACCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTC 68859 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||| |||||| || || | |||||| | || ||||| Sbjct 68860 TGCTTCACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTG 68919 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 68920 AGGGTCTTCACGAAGATCTGCAT 68942 >seq61750 Length=9220 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || ||||| ||| || || || || || ||||| || || || | Sbjct 3750 GCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCC 3809 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || ||||| ||||||||||| | ||| | || ||| || Sbjct 3810 GTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTT 3869 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| || || || | || | | |||||||| ||||| || || | || || Sbjct 3870 GTCCTGGATCTTTTGCTTCACGTTCTCGATGGTATCGCTGGACTCGACCTCGAGAGTAAT 3929 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| || || || ||||| ||||| Sbjct 3930 CGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3965 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || |||| || ||||| Sbjct 3535 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGGCCGTCCTCGAGCTGC 3594 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || ||||| || || |||||||||||||| | ||| | || || |||||| ||| ||| Sbjct 3595 TTACCCGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTC 3654 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || |||| || | | ||| ||| ||| || || | ||||| | || ||||| Sbjct 3655 TGCTTGACGTTCTCGATCGTGTCGGAGCTCTCAACCTCGAGGGTGATCGTCTTACCCGTG 3714 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || ||||| ||||| Sbjct 3715 AGCGTCTTGACGAAGATCTGCAT 3737 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 3991 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 4050 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || ||||| || || |||||||||||||||| || | || || |||||| || || Sbjct 4051 TTACCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCTTT 4110 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||||| ||||| || |||| ||||| | || || || Sbjct 4111 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCCAGGGTGATGGTCTTGCCGGTG 4170 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 4171 AGGGTCTTCACGAAGATCTGCAT 4193 >seq47541 Length=1677 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 1420 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 1479 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 |||||||||||||| || | ||| | | ||| |||||| ||| ||||| |||| | Sbjct 1480 GATAAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 1539 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||| |||||| || || | ||||| | || || || || || || || Sbjct 1540 CTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGAC 1599 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 1600 GAAGATCTGCAT 1611 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || |||| || ||||| Sbjct 1181 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCTAGCTGC 1240 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | || | || ||| |||||| ||| ||| Sbjct 1241 TTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTC 1300 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || |||| || | | ||| || ||| ||| || || | ||||| | || || Sbjct 1301 TGCTTGACGTTCTCAATCGTGTCCGAGCT---CTCGACTTCGAGGGTGATGGTCTTGCCG 1357 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || ||||| ||||| Sbjct 1358 GTCAGAGTCTTCACGAAGATCTGCAT 1383 >seq33763 Length=823 Score = 102 bits (112), Expect = 7e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 39106 TTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGC 39165 || || ||||| || || || |||| || ||||| ||||| || || || ||||||||| Sbjct 2 TTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGC 61 Query 39166 TGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCG 39225 || |||| ||| | | ||| |||||| ||| ||||| || | || | | ||| ||| Sbjct 62 TGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTTACGTTCTCGATCGTGTCG 121 Query 39226 CTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||| || || | |||||| | || ||||| || || || || ||||| ||||| Sbjct 122 GACGACTCGACCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 180 >seq33364 Length=844 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || || || || Sbjct 13 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 72 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||||| ||| | | ||| |||||| ||| ||||| || | | Sbjct 73 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 132 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||| |||||| || || | ||||| | || ||||| || || || || Sbjct 133 CTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTGAC 192 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 193 GAAGATCTGCAT 204 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 241 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 300 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| || | || | || ||| |||||| ||| ||||| || | | Sbjct 301 GATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 360 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||| ||||| || || | ||||| | || || || || || || || Sbjct 361 CTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 420 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 421 GAAGATCTGCAT 432 >seq65762 Length=1559 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 177 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 236 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || ||||| ||||||||||| | ||| | || ||| ||||| ||| ||| Sbjct 237 TTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTC 296 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||| |||||| || || | || || | || || ||| Sbjct 297 TGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGAGTAATCGTCTTGCCGGTC 356 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 357 AGGGTCTTGACGAAGATCTGCAT 379 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 633 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 692 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || ||||| || |||||||||||||||| || | || || |||||| ||| ||| Sbjct 693 TTACCAGCAAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTC 752 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | || || ||| ||| || || | ||||| | || || Sbjct 753 TGCTTCACGTTCTCGATGGTGTCCGAGCT---CTCGACCTCGAGGGTGATGGTCTTGCCG 809 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || ||||||||||| Sbjct 810 GTCAGGGTCTTCACGAAGATTTGCAT 835 >seq61737 Length=2782 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || |||| || ||||| ||||| || || Sbjct 2066 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 2007 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || ||| |||||| || ||||| |||| | Sbjct 2006 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTT 1947 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||| ||||| || || | ||||| | || || || || || || || Sbjct 1946 CTCGATGGTGTCGCTGGACTCGACTTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 1887 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 1886 GAAGATCTGCAT 1875 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 2305 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGC 2246 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || ||||| ||||||||||||| || | || || |||||| ||| ||| Sbjct 2245 TTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATCTTC 2186 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || |||| || | | || || ||| ||| || || | ||||| | || ||| Sbjct 2185 TGCTTGACGTTCTCGATGGTGTCCGAGCT---CTCGACCTCGAGGGTGATCGTCTTACCC 2129 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || ||||| ||||| Sbjct 2128 GTGAGGGTCTTGACGAAGATCTGCAT 2103 >seq38151 Length=7651 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || ||||| || Sbjct 274 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAA 215 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 214 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 155 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||| ||| || || | ||||| | || ||||| || || || || Sbjct 154 CTCGATCGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTACCCGTGAGGGTCTTGAC 95 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 94 GAAGATCTGCAT 83 >seq37491 Length=1671 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 401 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 460 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 |||||||| || || ||||||||||| || | || | || ||| |||||| || || Sbjct 461 TTGCCCGCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTT 520 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||| ||||| || || | || || | || || || Sbjct 521 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTAATGGTCTTGCCGGTG 580 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 581 AGGGTCTTCACGAAGATCTGCAT 603 >seq20806 Length=178 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || || ||||| Sbjct 172 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAA 113 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| |||| || | || || |||||| ||| ||||| |||| | Sbjct 112 GATGAGACGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTT 53 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 | | | ||| ||||| ||||| || || | ||||| Sbjct 52 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGAT 17 >seq54486 Length=978 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 817 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 876 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || ||||||||||| |||| || | || || |||||| ||| ||| Sbjct 877 TTGCCGGCGAAGATGAGACGCTGCTGATCGGGCGGGATGCCTTCCTTGTCCTGGATCTTC 936 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTC 39239 || || | || | | || ||||| ||||| || || Sbjct 937 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTC 974 >seq50178 Length=5618 Score = 82.4 bits (90), Expect = 7e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 1095 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1154 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||||| || | || ||| |||||| ||| ||||| || | | Sbjct 1155 GATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1214 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | | || || ||| ||| || || | ||||| | || || ||||| || || Sbjct 1215 CTCGATGGTGTCCGAGCT---CTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTT 1271 Query 39270 AACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 1272 GACGAAGATCTGCAT 1286 >seq24217 Length=160 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 39085 AGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTG 39144 || ||| ||| || || || || || ||||| || || || |||| || ||||| ||| Sbjct 2 AGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTG 61 Query 39145 CCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGT 39204 || || || || ||||||||||| |||| || | || ||| |||||| ||| ||||| Sbjct 62 CCAGCGAAGATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGC 121 Query 39205 TTGAGCGTCGCCACCGTATCGCTCGACTCCACGTC 39239 || | || | | ||| ||| |||||| || || Sbjct 122 TTCACGTTCTCGATCGTGTCGGACGACTCGACCTC 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429192446266067