Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq63570 154 2e-32 seq64782 150 2e-31 seq41198 150 2e-31 seq65788 143 3e-29 seq65093 140 4e-28 seq43845 138 1e-27 seq57533 136 5e-27 seq42015 136 5e-27 seq48913 134 2e-26 seq49679 132 5e-26 seq37129 131 2e-25 seq54603 127 2e-24 seq37153 125 8e-24 seq66251 122 1e-22 seq23646 98.7 1e-15 seq27103 93.3 5e-14 seq50848 86.0 7e-12 >seq63570 Length=11955 Score = 154 bits (170), Expect = 2e-32 Identities = 150/193 (78%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| |||||||| Sbjct 6871 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 6812 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || |||| | Sbjct 6811 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 6752 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 6751 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 6692 Query 43172 AAAGATTTGCAtt 43184 |||||| |||||| Sbjct 6691 AAAGATCTGCATT 6679 >seq64782 Length=5112 Score = 150 bits (166), Expect = 2e-31 Identities = 149/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 2527 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 2468 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| ||||| || | | Sbjct 2467 GATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 2408 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 2407 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 2348 Query 43172 AAAGATTTGCAtt 43184 |||||| |||||| Sbjct 2347 AAAGATCTGCATT 2335 >seq41198 Length=3949 Score = 150 bits (166), Expect = 2e-31 Identities = 149/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 1452 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1393 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || || || | | Sbjct 1392 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1333 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 1332 CTCGATGGTGTCGCTCGACTCGACTTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 1273 Query 43172 AAAGATTTGCAtt 43184 |||||| |||||| Sbjct 1272 AAAGATCTGCATT 1260 >seq65788 Length=3562 Score = 143 bits (158), Expect = 3e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||||||||| || Sbjct 373 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAA 314 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || |||| | Sbjct 313 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 254 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||||||| || || |||| ||||| || ||||| || || ||||| || Sbjct 253 CTCGATCGTGTCGCTCGACTCGACCTCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTCAC 194 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 193 GAAGATCTGCAT 182 Score = 143 bits (158), Expect = 3e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 1189 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1130 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || |||| | Sbjct 1129 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 1070 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 1069 CTCGATGGTGTCGCTCGACTCGACTTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 1010 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 1009 GAAGATCTGCAT 998 Score = 102 bits (112), Expect = 9e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 145 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 86 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || || || | | Sbjct 85 GATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 26 Query 43112 CGCCACCGTGTCGCTCGATTCCAC 43135 | | | ||||||||||| || || Sbjct 25 CTCAATGGTGTCGCTCGACTCGAC 2 >seq65093 Length=7051 Score = 140 bits (154), Expect = 4e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 4714 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 4773 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||||| ||| ||||| |||| | Sbjct 4774 GATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTT 4833 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||||||| || || |||| || || || |||||||| || ||||| || Sbjct 4834 CTCGATCGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCCGTGAGGGTCTTGAC 4893 Query 43172 AAAGATTTGC 43181 ||||| ||| Sbjct 4894 GAAGATCTGC 4903 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 4321 CTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 4380 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || || | | Sbjct 4381 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 4440 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 4441 CTCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTT 4497 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 4498 GACGAAGATCTGCAT 4512 >seq43845 Length=2684 Score = 138 bits (152), Expect = 1e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| |||||||| Sbjct 2619 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 2560 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| || || || || | | Sbjct 2559 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 2500 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| || || || ||||| || || ||||| || Sbjct 2499 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATCGTCTTGCCAGTGAGGGTCTTCAC 2440 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 2439 GAAGATCTGCATTGTT 2424 >seq57533 Length=4825 Score = 136 bits (150), Expect = 5e-27 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 3092 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 3151 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | | |||||||||| ||| || || || | | Sbjct 3152 GATGAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 3211 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 3212 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 3271 Query 43172 AAAGATTTGCAtt 43184 ||||| |||||| Sbjct 3272 GAAGATCTGCATT 3284 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 2408 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 2467 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 2468 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 2527 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| ||||| || ||||| || || ||||| || Sbjct 2528 CTCGATGGTGTCGCTCGACTCGACCTCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTCAC 2587 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 2588 GAAGATCTGCAT 2599 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 2636 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2695 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | | |||||||||| ||| || || |||| | Sbjct 2696 GATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 2755 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 2756 CTCGATCGTGTCCGAGCTC---TCGACCTCGAGAGTGATCGTCTTACCGGTGAGAGTCTT 2812 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 2813 GACGAAGATCTGCAT 2827 >seq42015 Length=1920 Score = 136 bits (150), Expect = 5e-27 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 190 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 249 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | || |||||||||| || || || |||| | Sbjct 250 GATGAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTT 309 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 310 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 369 Query 43172 AAAGATTTGCAtt 43184 ||||| |||||| Sbjct 370 GAAGATCTGCATT 382 Score = 104 bits (114), Expect = 3e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 43032 TCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 || |||||||| || ||||| ||||| |||||||| || | || | || |||||||||| Sbjct 2 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 61 Query 43092 ATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 ||| || || |||| || | | ||||||||||| || || |||| || || || Sbjct 62 TGGATCTTCTGCTTGACGTTCTCAATGGTGTCGCTCGACTCGACCTCGAGAGTAATCGTC 121 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183 || ||||| || ||||| || ||||| ||||| Sbjct 122 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 153 >seq48913 Length=4472 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 772 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 831 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| |||| || | | |||||||||| ||| || || || | | Sbjct 832 GATGAGACGCTGCTGATCGGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 891 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 892 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 951 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 952 GAAGATCTGCAT 963 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || || || Sbjct 544 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 603 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || || | | Sbjct 604 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 663 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| |||| || || |||| |||||||| || || || || ||||| Sbjct 664 CTCGATCGTGTCGGAGCTC---TCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTT 720 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 721 GACGAAGATCTGCAT 735 >seq49679 Length=1067 Score = 132 bits (146), Expect = 5e-26 Identities = 147/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 860 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 919 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || || |||| | Sbjct 920 GATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 979 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| |||| || || |||| |||||||| ||||| || |||||||| Sbjct 980 CTCGATCGTGTCCGAGCTC---TCGACTTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTT 1036 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 1037 GACGAAGATCTGCAT 1051 >seq37129 Length=1363 Score = 131 bits (144), Expect = 2e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 1237 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1178 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | | |||||||||| ||| || || || | | Sbjct 1177 GATGAGGCGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1118 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 1117 CTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 1058 Query 43172 AAAGATTTGCAtttt 43186 ||||||||||| || Sbjct 1057 GAAGATTTGCATGTT 1043 >seq54603 Length=2606 Score = 127 bits (140), Expect = 2e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 2516 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2457 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | | |||||||||| ||| || || || | | Sbjct 2456 GATGAGGCGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 2397 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| || || || || ||||| || Sbjct 2396 CTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCAC 2337 Query 43172 AAAGATTTGCAtttt 43186 ||||||||||| || Sbjct 2336 GAAGATTTGCATGTT 2322 >seq37153 Length=844 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 490 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAA 431 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||||| ||| ||||| || | | Sbjct 430 GATGAGGCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTT 371 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||| ||| || || |||| || || || ||||| || || ||||| || Sbjct 370 CTCGATCGTGTCGGACGACTCGACCTCGAGAGTAATCGTCTTGCCGGTCAGGGTCTTCAC 311 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 310 GAAGATCTGCAT 299 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| |||||||| Sbjct 262 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 203 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||||| ||| || || || | | Sbjct 202 GATGAGGCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTT 143 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || |||| ||||| || |||||||| || ||||| Sbjct 142 CTCGATGGTGTCCGAGCTC---TCGACTTCGAGGGTGATAGTCTTGCCCGTCAGGGTCTT 86 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 85 GACGAAGATCTGCAT 71 >seq66251 Length=5749 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 3138 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 3079 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || |||| | Sbjct 3078 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 3019 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||| || || || |||| || || || || || || || ||||| || Sbjct 3018 CTCGATGGTGTCGCTAGACTCGACCTCGAGGGTAATCGTCTTACCGGTCAGGGTCTTCAC 2959 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 2958 GAAGATCTGCAT 2947 Score = 118 bits (130), Expect = 1e-21 Identities = 135/180 (75%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 43007 GTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTG 43066 ||| || ||||| || || |||| || |||||||| |||||||| ||||| |||||||| Sbjct 2823 GTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTG 2764 Query 43067 GTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC--- 43123 ||| | ||| | || |||||||||| || ||||| || | || | | |||||| Sbjct 2763 GTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTTGCTTCACGTTCTCGATCGTGTCCGA 2704 Query 43124 GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183 |||| || || |||| |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 2703 GCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2647 >seq23646 Length=172 Score = 98.7 bits (108), Expect = 1e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| || ||||| || || |||| || ||||||||||||||||| Sbjct 55 CTCCTTCTGAATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 114 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||||| |||||||| || | || | || |||||||||| ||| || || || Sbjct 115 GATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 168 >seq27103 Length=124 Score = 93.3 bits (102), Expect = 5e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||||||||||||||| Sbjct 7 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 66 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||||| |||||||| |||| || | || |||||||||| ||| || || || Sbjct 67 GATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 120 >seq50848 Length=4155 Score = 86.0 bits (94), Expect = 7e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||| ||| |||||||| || || || || |||| || |||||||| ||| Sbjct 2543 GTGCTCTCCGGTTGGATATTGTAGTCGGCGAGCGTAAAGCCGTCCTCAAGCTGCTTGCCA 2484 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 ||||| |||| ||||||||||||| ||| | || |||| ||||| Sbjct 2483 GCGAAGATGATACGCTGCTGGTCGGGCGGGATGCCCTCCATGTCC 2439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571337037341240