Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq48231 125 2e-24 >seq48231 Length=140065 Score = 125 bits (138), Expect = 2e-24 Identities = 218/306 (71%), Gaps = 12/306 (4%) Strand=Plus/Plus Query 39262 GCCGCCGCCGACGCGCTTCGTCGTGTAGAACAGTACGTACGGCTTCGCCGTGTACGGATC 39321 |||||||||||||||||| || |||||||| || ||||| || || || | |||||||| Sbjct 138582 GCCGCCGCCGACGCGCTTGGTGGTGTAGAATAGCACGTAGGGTTTTGCGGAATACGGATC 138641 Query 39322 GCGCAGCACGCGAACCCCGATGCGGTCGATGATCAGATA-CGTCTGCTGGAAGTCGCCGA 39380 ||||||||||| ||||||| || || | |||||| || | | || |||| ||||||| Sbjct 138642 ACGCAGCACGCGCACCCCGAGACGATCCACGATCAGGTAGCCGCGGC-GGAAATCGCCGA 138700 Query 39381 AGAGAATCGGCGTCGAGTTCGCCGCCACATCCGGCATGTC--CGGC-ACCTCGGTAACCG 39437 | |||| | ||| ||||| || | ||||||||||| |||| || || | | Sbjct 138701 ACGCGATCGACAGCGAATTCGCGGCGATGTCCGGCATGTCCTCGGCTTCCACG---AGAG 138757 Query 39438 GATAGCCCGCCAGCGTCGC-CGGCTGCCCCGCTACGTACGACGGTTGCCAGAGATA-GTT 39495 | | | ||||| || || | |||| || || || ||| ||||| ||||| | Sbjct 138758 GGAACGTCATCAGCGATGCGCGCCCGCCCGCCTGCG-CCGGCGGCTGCCACAGATACGCG 138816 Query 39496 CCCTTGGCCGTCCTTCAGCTTCCGCACCTGACGCTGCGTGTTGCGGTTCATCGCGAAGCG 39555 || ||| |||||| | ||| || | | |||||| |||||||||||| ||||| Sbjct 138817 CCGGTGG-TGTCCTTGAACTTGCGGATCGCGGCCTGCGTCTTGCGGTTCATCACGAAGGC 138875 Query 39556 GGCGTT 39561 | |||| Sbjct 138876 GCCGTT 138881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143303096553428